RNA–Protein interactions for RNA: ENST00000354764.8

PGAP1-201, Transcript of post-GPI attachment to proteins 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGAP1, Length 11,114 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP1-201ENST00000354764 NISCHQ9Y2I1 1504 aa13.62□□□□□ -0.23
PGAP1-201ENST00000354764 SUPT5HO00267 1087 aaKnown RBP12.32□□□□□ -0.44
PGAP1-201ENST00000354764 SHROOM4Q9ULL8 1493 aa12.18□□□□□ -0.46
PGAP1-201ENST00000354764 PELP1Q8IZL8 1130 aaKnown RBP12.13□□□□□ -0.47
PGAP1-201ENST00000354764 HRCP23327 699 aa12.11□□□□□ -0.47
PGAP1-201ENST00000354764 DCAF8L2P0C7V8 631 aa12.04□□□□□ -0.48
PGAP1-201ENST00000354764 ZEB1P37275 1124 aaPredicted RBP12□□□□□ -0.49
PGAP1-201ENST00000354764 PCGF6Q9BYE7 350 aa12□□□□□ -0.49
PGAP1-201ENST00000354764 MYT1Q01538 1121 aa11.85□□□□□ -0.51
PGAP1-201ENST00000354764 CHIC1Q5VXU3 224 aa11.83□□□□□ -0.51
PGAP1-201ENST00000354764 TRIM26Q12899 539 aaPredicted RBP11.77□□□□□ -0.53
PGAP1-201ENST00000354764 CENPBP07199 599 aaPredicted RBP11.65□□□□□ -0.54
PGAP1-201ENST00000354764 DCAF1Q9Y4B6 1507 aa11.6□□□□□ -0.55
PGAP1-201ENST00000354764 PPARGC1BQ86YN6 1023 aaKnown RBP11.57□□□□□ -0.56
PGAP1-201ENST00000354764 TRIM41Q8WV44 630 aa11.54□□□□□ -0.56
PGAP1-201ENST00000354764 ZCCHC6Q5VYS8 1495 aaKnown RBP11.5□□□□□ -0.57
PGAP1-201ENST00000354764 LOC105371045A0A1W2PR82 267 aa11.47□□□□□ -0.57
PGAP1-201ENST00000354764 CCER1Q8TC90 406 aaPredicted RBP11.44□□□□□ -0.58
PGAP1-201ENST00000354764 FAM9AQ8IZU1 332 aaPredicted RBP11.42□□□□□ -0.58
PGAP1-201ENST00000354764 MYO15BQ96JP2 1530 aa11.35□□□□□ -0.59
PGAP1-201ENST00000354764 EHMT2Q96KQ7 1210 aa11.32□□□□□ -0.6
PGAP1-201ENST00000354764 CCDC180Q9P1Z9 1646 aa11.29□□□□□ -0.6
PGAP1-201ENST00000354764 APLP2Q06481 763 aa11.27□□□□□ -0.61
PGAP1-201ENST00000354764 ACIN1Q9UKV3 1341 aaKnown RBP11.26□□□□□ -0.61
PGAP1-201ENST00000354764 DIEXFQ68CQ4 756 aaKnown RBP11.22□□□□□ -0.61
PGAP1-201ENST00000354764 SCAF1Q9H7N4 1312 aaKnown RBP11.16□□□□□ -0.62
PGAP1-201ENST00000354764 GTF3C3Q9Y5Q9 886 aa11.14□□□□□ -0.63
PGAP1-201ENST00000354764 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.11□□□□□ -0.63
PGAP1-201ENST00000354764 UBTFP17480 764 aaKnown RBP11.09□□□□□ -0.63
PGAP1-201ENST00000354764 YTHDC1Q96MU7 727 aaKnown RBP11.08□□□□□ -0.64
PGAP1-201ENST00000354764 ZNF316A6NFI3 1004 aaPredicted RBP11.07□□□□□ -0.64
PGAP1-201ENST00000354764 CLSPNQ9HAW4 1339 aa11.07□□□□□ -0.64
PGAP1-201ENST00000354764 TTBK1Q5TCY1 1321 aaPredicted RBP11.06□□□□□ -0.64
PGAP1-201ENST00000354764 NEUROD1Q13562 356 aa11.01□□□□□ -0.65
PGAP1-201ENST00000354764 NEFLP07196 543 aa10.98□□□□□ -0.65
PGAP1-201ENST00000354764 RSF1Q96T23 1441 aaPredicted RBP10.94□□□□□ -0.66
PGAP1-201ENST00000354764 ERICH6Q7L0X2 663 aa10.92□□□□□ -0.66
PGAP1-201ENST00000354764 HNRNPUL2Q1KMD3 747 aaKnown RBP10.89□□□□□ -0.67
PGAP1-201ENST00000354764 RB1CC1Q8TDY2 1594 aa10.86□□□□□ -0.67
PGAP1-201ENST00000354764 CSRNP3Q8WYN3 585 aa10.85□□□□□ -0.67
PGAP1-201ENST00000354764 ABCC9O60706 1549 aa10.85□□□□□ -0.67
PGAP1-201ENST00000354764 EEA1Q15075 1411 aa10.84□□□□□ -0.67
PGAP1-201ENST00000354764 SCRIBQ14160 1630 aa10.79□□□□□ -0.68
PGAP1-201ENST00000354764 TNIKQ9UKE5 1360 aa10.77□□□□□ -0.69
PGAP1-201ENST00000354764 CEP162Q5TB80 1403 aa10.73□□□□□ -0.69
PGAP1-201ENST00000354764 RANGAP1P46060 587 aaPredicted RBP10.72□□□□□ -0.69
PGAP1-201ENST00000354764 MIER1Q8N108 512 aa10.72□□□□□ -0.69
PGAP1-201ENST00000354764 WRNQ14191 1432 aaPredicted RBP eCLIP10.7□□□□□ -0.7
PGAP1-201ENST00000354764 GOLGA3Q08378 1498 aa10.68□□□□□ -0.7
PGAP1-201ENST00000354764 MYT1LQ9UL68 1186 aa10.64□□□□□ -0.71
PGAP1-201ENST00000354764 NACADO15069 1562 aa10.63□□□□□ -0.71
PGAP1-201ENST00000354764 ANP32EQ9BTT0 268 aa10.63□□□□□ -0.71
PGAP1-201ENST00000354764 ANP32CO43423 234 aa10.61□□□□□ -0.71
PGAP1-201ENST00000354764 CLIP1P30622 1438 aa10.6□□□□□ -0.71
PGAP1-201ENST00000354764 CDK11AQ9UQ88 783 aaPredicted RBP10.59□□□□□ -0.71
PGAP1-201ENST00000354764 CEP164Q9UPV0 1460 aa10.58□□□□□ -0.72
PGAP1-201ENST00000354764 ITGAEP38570 1179 aa10.57□□□□□ -0.72
PGAP1-201ENST00000354764 BAZ1AQ9NRL2 1556 aaPredicted RBP10.57□□□□□ -0.72
PGAP1-201ENST00000354764 BCANQ96GW7 911 aa10.54□□□□□ -0.72
PGAP1-201ENST00000354764 SUPT16HQ9Y5B9 1047 aaKnown RBP10.54□□□□□ -0.72
PGAP1-201ENST00000354764 FKBP8Q14318 412 aa10.53□□□□□ -0.72
PGAP1-201ENST00000354764 CECR2Q9BXF3 1484 aa10.53□□□□□ -0.72
PGAP1-201ENST00000354764 ATP1B4Q9UN42 357 aaPredicted RBP10.52□□□□□ -0.73
PGAP1-201ENST00000354764 MROH2BQ7Z745 1585 aa10.51□□□□□ -0.73
PGAP1-201ENST00000354764 VPS8Q8N3P4 1428 aa10.49□□□□□ -0.73
PGAP1-201ENST00000354764 RTL5Q5HYW3 569 aaPredicted RBP10.48□□□□□ -0.73
PGAP1-201ENST00000354764 FAM50AQ14320 339 aaKnown RBP10.45□□□□□ -0.74
PGAP1-201ENST00000354764 SOGA1O94964 1423 aa10.45□□□□□ -0.74
PGAP1-201ENST00000354764 TIMELESSQ9UNS1 1208 aa10.45□□□□□ -0.74
PGAP1-201ENST00000354764 TOP2AP11388 1531 aaKnown RBP10.43□□□□□ -0.74
PGAP1-201ENST00000354764 TSHZ2Q9NRE2 1034 aa10.42□□□□□ -0.74
PGAP1-201ENST00000354764 CCDC88BA6NC98 1476 aa10.42□□□□□ -0.74
PGAP1-201ENST00000354764 DDX10Q13206 875 aaKnown RBP10.41□□□□□ -0.74
PGAP1-201ENST00000354764 CCER2I3L3R5 266 aa10.41□□□□□ -0.74
PGAP1-201ENST00000354764 BAZ1BQ9UIG0 1483 aaKnown RBP10.4□□□□□ -0.75
PGAP1-201ENST00000354764 TONSLQ96HA7 1378 aa10.38□□□□□ -0.75
PGAP1-201ENST00000354764 BCL11AQ9H165 835 aa10.37□□□□□ -0.75
PGAP1-201ENST00000354764 ERICH6BQ5W0A0 696 aa10.36□□□□□ -0.75
PGAP1-201ENST00000354764 WIZO95785 1651 aa10.35□□□□□ -0.75
PGAP1-201ENST00000354764 ABCC8Q09428 1581 aa10.35□□□□□ -0.75
PGAP1-201ENST00000354764 CCNB3Q8WWL7 1395 aa10.34□□□□□ -0.75
PGAP1-201ENST00000354764 ANP32AP39687 249 aaKnown RBP10.34□□□□□ -0.75
PGAP1-201ENST00000354764 DHX57Q6P158 1386 aaKnown RBP10.33□□□□□ -0.75
PGAP1-201ENST00000354764 PABPN1Q86U42 306 aaKnown RBP eCLIP10.33□□□□□ -0.76
PGAP1-201ENST00000354764 DAXXQ9UER7 740 aaPredicted RBP10.33□□□□□ -0.76
PGAP1-201ENST00000354764 HNRNPUQ00839 825 aaKnown RBP eCLIP10.33□□□□□ -0.76
PGAP1-201ENST00000354764 RBM19Q9Y4C8 960 aaKnown RBP10.31□□□□□ -0.76
PGAP1-201ENST00000354764 KIF27Q86VH2 1401 aa10.29□□□□□ -0.76
PGAP1-201ENST00000354764 TRIM52Q96A61 297 aa10.29□□□□□ -0.76
PGAP1-201ENST00000354764 PPP4R2Q9NY27 417 aa10.28□□□□□ -0.76
PGAP1-201ENST00000354764 SETD5Q9C0A6 1442 aa10.26□□□□□ -0.77
PGAP1-201ENST00000354764 KIF21BO75037 1637 aa10.24□□□□□ -0.77
PGAP1-201ENST00000354764 SMARCA2P51531 1590 aa10.24□□□□□ -0.77
PGAP1-201ENST00000354764 SMARCA4P51532 1647 aa10.22□□□□□ -0.77
PGAP1-201ENST00000354764 RUSC2Q8N2Y8 1516 aa10.22□□□□□ -0.77
PGAP1-201ENST00000354764 ZBTB47Q9UFB7 747 aaPredicted RBP10.22□□□□□ -0.77
PGAP1-201ENST00000354764 FHAD1B1AJZ9 1412 aa10.22□□□□□ -0.77
PGAP1-201ENST00000354764 FANCIQ9NVI1 1328 aa10.21□□□□□ -0.77
PGAP1-201ENST00000354764 RAB3GAP2Q9H2M9 1393 aa10.21□□□□□ -0.78
PGAP1-201ENST00000354764 EIF4G2P78344 907 aaKnown RBP eCLIP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 198.9 ms