RNA–Protein interactions for RNA: ENST00000522901.1

AP3B1-207, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 3

Gene AP3B1, Length 1,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-207ENST00000522901 AEBP2Q6ZN18 517 aaPredicted RBP25.93■■□□□ 1.74
AP3B1-207ENST00000522901 CHIC1Q5VXU3 224 aa25.02■■□□□ 1.6
AP3B1-207ENST00000522901 SENP3Q9H4L4 574 aaPredicted RBP22.1■■□□□ 1.13
AP3B1-207ENST00000522901 PHF23Q9BUL5 403 aaPredicted RBP21.95■■□□□ 1.1
AP3B1-207ENST00000522901 NISCHQ9Y2I1 1504 aa20.85■□□□□ 0.93
AP3B1-207ENST00000522901 FOXD1Q16676 465 aa20.54■□□□□ 0.88
AP3B1-207ENST00000522901 PLPPR3Q6T4P5 718 aa20.2■□□□□ 0.82
AP3B1-207ENST00000522901 ADRA2BP18089 450 aa19.51■□□□□ 0.71
AP3B1-207ENST00000522901 PPP6R1Q9UPN7 881 aa19.5■□□□□ 0.71
AP3B1-207ENST00000522901 PIAS4Q8N2W9 510 aaPredicted RBP19.34■□□□□ 0.69
AP3B1-207ENST00000522901 MSH5O43196 834 aa19.09■□□□□ 0.65
AP3B1-207ENST00000522901 CCDC180Q9P1Z9 1646 aa18.54■□□□□ 0.56
AP3B1-207ENST00000522901 ABCC9O60706 1549 aa18.26■□□□□ 0.51
AP3B1-207ENST00000522901 POTEDQ86YR6 584 aa17.96■□□□□ 0.47
AP3B1-207ENST00000522901 SCAF1Q9H7N4 1312 aaKnown RBP17.88■□□□□ 0.45
AP3B1-207ENST00000522901 MAPK8IP2Q13387 824 aaPredicted RBP17.8■□□□□ 0.44
AP3B1-207ENST00000522901 PPP4R3CPQ6ZMV5 832 aa17.77■□□□□ 0.44
AP3B1-207ENST00000522901 DMRT2Q9Y5R5 561 aa17.56■□□□□ 0.4
AP3B1-207ENST00000522901 RB1CC1Q8TDY2 1594 aa17.54■□□□□ 0.4
AP3B1-207ENST00000522901 NACADO15069 1562 aa17.51■□□□□ 0.39
AP3B1-207ENST00000522901 DCAF8L2P0C7V8 631 aa17.46■□□□□ 0.39
AP3B1-207ENST00000522901 MYO15BQ96JP2 1530 aa17.42■□□□□ 0.38
AP3B1-207ENST00000522901 ZCCHC6Q5VYS8 1495 aaKnown RBP17.34■□□□□ 0.37
AP3B1-207ENST00000522901 CNKSR2Q8WXI2 1034 aa17.33■□□□□ 0.36
AP3B1-207ENST00000522901 DCAF1Q9Y4B6 1507 aa17.28■□□□□ 0.36
AP3B1-207ENST00000522901 NCBP3Q53F19 620 aaKnown RBP17.24■□□□□ 0.35
AP3B1-207ENST00000522901 PABPN1Q86U42 306 aaKnown RBP eCLIP17.06■□□□□ 0.32
AP3B1-207ENST00000522901 RNF216Q9NWF9 866 aaPredicted RBP17.06■□□□□ 0.32
AP3B1-207ENST00000522901 HOXD11P31277 338 aaPredicted RBP17.05■□□□□ 0.32
AP3B1-207ENST00000522901 UNC13AQ9UPW8 1703 aa17■□□□□ 0.31
AP3B1-207ENST00000522901 DCAF8L1A6NGE4 600 aa16.98■□□□□ 0.31
AP3B1-207ENST00000522901 BICRAQ9NZM4 1560 aa16.98■□□□□ 0.31
AP3B1-207ENST00000522901 KCNA4P22459 653 aa16.97■□□□□ 0.31
AP3B1-207ENST00000522901 NPM3O75607 178 aaKnown RBP16.93■□□□□ 0.3
AP3B1-207ENST00000522901 SHROOM4Q9ULL8 1493 aa16.9■□□□□ 0.3
AP3B1-207ENST00000522901 SCRIBQ14160 1630 aa16.88■□□□□ 0.29
AP3B1-207ENST00000522901 DNAJC5BQ9UF47 199 aa16.88■□□□□ 0.29
AP3B1-207ENST00000522901 EIF4G1Q04637 1599 aaKnown RBP16.55■□□□□ 0.24
AP3B1-207ENST00000522901 CC2D2AQ9P2K1 1620 aa16.5■□□□□ 0.23
AP3B1-207ENST00000522901 CECR2Q9BXF3 1484 aa16.45■□□□□ 0.22
AP3B1-207ENST00000522901 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.37■□□□□ 0.21
AP3B1-207ENST00000522901 RNF39Q9H2S5 420 aa16.29■□□□□ 0.2
AP3B1-207ENST00000522901 CACNB1Q02641 598 aaPredicted RBP16.21■□□□□ 0.19
AP3B1-207ENST00000522901 NCAPD3P42695 1498 aa16.19■□□□□ 0.18
AP3B1-207ENST00000522901 BAZ1AQ9NRL2 1556 aaPredicted RBP16.17■□□□□ 0.18
AP3B1-207ENST00000522901 SMARCA4P51532 1647 aa16.16■□□□□ 0.18
AP3B1-207ENST00000522901 ATAD2BQ9ULI0 1458 aa16.16■□□□□ 0.18
AP3B1-207ENST00000522901 SLC4A1APQ9BWU0 796 aaKnown RBP16.14■□□□□ 0.17
AP3B1-207ENST00000522901 SMARCA2P51531 1590 aa16.13■□□□□ 0.17
AP3B1-207ENST00000522901 C1QBPQ07021 282 aaKnown RBP16.1■□□□□ 0.17
AP3B1-207ENST00000522901 HMGXB3Q12766 1538 aa16.07■□□□□ 0.16
AP3B1-207ENST00000522901 PEG3Q9GZU2 1588 aa16.05■□□□□ 0.16
AP3B1-207ENST00000522901 SLC4A2P04920 1241 aa16.05■□□□□ 0.16
AP3B1-207ENST00000522901 MROH2BQ7Z745 1585 aa16.04■□□□□ 0.16
AP3B1-207ENST00000522901 BAZ1BQ9UIG0 1483 aaKnown RBP16■□□□□ 0.15
AP3B1-207ENST00000522901 U3KPZ7 1027 aaPredicted RBP15.97■□□□□ 0.15
AP3B1-207ENST00000522901 RSF1Q96T23 1441 aaPredicted RBP15.85■□□□□ 0.13
AP3B1-207ENST00000522901 WIZO95785 1651 aa15.81■□□□□ 0.12
AP3B1-207ENST00000522901 ERCC6Q03468 1493 aa15.78■□□□□ 0.12
AP3B1-207ENST00000522901 NESP48681 1621 aa15.76■□□□□ 0.11
AP3B1-207ENST00000522901 LAMC3Q9Y6N6 1575 aa15.74■□□□□ 0.11
AP3B1-207ENST00000522901 FOXD4L1Q9NU39 408 aa15.72■□□□□ 0.11
AP3B1-207ENST00000522901 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.71■□□□□ 0.11
AP3B1-207ENST00000522901 HNRNPUL2Q1KMD3 747 aaKnown RBP15.71■□□□□ 0.11
AP3B1-207ENST00000522901 CADPSQ9ULU8 1353 aa15.71■□□□□ 0.11
AP3B1-207ENST00000522901 TOP2AP11388 1531 aaKnown RBP15.7■□□□□ 0.1
AP3B1-207ENST00000522901 PDS5BQ9NTI5 1447 aa15.68■□□□□ 0.1
AP3B1-207ENST00000522901 CUX2O14529 1486 aa15.68■□□□□ 0.1
AP3B1-207ENST00000522901 CAPN15O75808 1086 aa15.68■□□□□ 0.1
AP3B1-207ENST00000522901 MYCNP04198 464 aaPredicted RBP15.67■□□□□ 0.1
AP3B1-207ENST00000522901 SPINK5Q9NQ38 1064 aaPredicted RBP15.66■□□□□ 0.1
AP3B1-207ENST00000522901 APLP2Q06481 763 aa15.64■□□□□ 0.09
AP3B1-207ENST00000522901 SAMD1Q6SPF0 538 aaPredicted RBP15.63■□□□□ 0.09
AP3B1-207ENST00000522901 CFTRP13569 1480 aa15.59■□□□□ 0.09
AP3B1-207ENST00000522901 ZBTB22O15209 634 aa15.57■□□□□ 0.08
AP3B1-207ENST00000522901 THOC2Q8NI27 1593 aaKnown RBP15.53■□□□□ 0.08
AP3B1-207ENST00000522901 TRHP20396 242 aaPredicted RBP15.53■□□□□ 0.08
AP3B1-207ENST00000522901 CCDC88BA6NC98 1476 aa15.52■□□□□ 0.08
AP3B1-207ENST00000522901 KIF21AQ7Z4S6 1674 aa15.51■□□□□ 0.07
AP3B1-207ENST00000522901 FANCD2Q9BXW9 1451 aa15.5■□□□□ 0.07
AP3B1-207ENST00000522901 MRC2Q9UBG0 1479 aa15.49■□□□□ 0.07
AP3B1-207ENST00000522901 CEP164Q9UPV0 1460 aa15.49■□□□□ 0.07
AP3B1-207ENST00000522901 ZNF219Q9P2Y4 722 aaPredicted RBP15.45■□□□□ 0.06
AP3B1-207ENST00000522901 WDR62O43379 1518 aa15.43■□□□□ 0.06
AP3B1-207ENST00000522901 DSG3P32926 999 aa15.4■□□□□ 0.06
AP3B1-207ENST00000522901 SUPT5HO00267 1087 aaKnown RBP15.34■□□□□ 0.05
AP3B1-207ENST00000522901 ABCB7O75027 752 aa15.34■□□□□ 0.05
AP3B1-207ENST00000522901 EHMT2Q96KQ7 1210 aa15.34■□□□□ 0.05
AP3B1-207ENST00000522901 DNAJC5Q9H3Z4 198 aa15.34■□□□□ 0.05
AP3B1-207ENST00000522901 URB2Q14146 1524 aaKnown RBP15.33■□□□□ 0.04
AP3B1-207ENST00000522901 PRDM2Q13029 1718 aa15.31■□□□□ 0.04
AP3B1-207ENST00000522901 ABCC8Q09428 1581 aa15.27■□□□□ 0.03
AP3B1-207ENST00000522901 ATF5Q9Y2D1 282 aaPredicted RBP15.26■□□□□ 0.03
AP3B1-207ENST00000522901 CSRNP3Q8WYN3 585 aa15.23■□□□□ 0.03
AP3B1-207ENST00000522901 TOPBP1Q92547 1522 aa15.22■□□□□ 0.03
AP3B1-207ENST00000522901 DNMBPQ6XZF7 1577 aa15.19■□□□□ 0.02
AP3B1-207ENST00000522901 IFT140Q96RY7 1462 aa15.19■□□□□ 0.02
AP3B1-207ENST00000522901 ATXN8OSP0DMR3 200 aa15.17■□□□□ 0.02
AP3B1-207ENST00000522901 POLA2Q14181 598 aa15.17■□□□□ 0.02
AP3B1-207ENST00000522901 POLA1P09884 1462 aaPredicted RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms