RNA–Protein interactions for RNA: ENST00000523204.1

AP3B1-208, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 5

Gene AP3B1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-208ENST00000523204 AEBP2Q6ZN18 517 aaPredicted RBP35.03■■■■□ 3.2
AP3B1-208ENST00000523204 CHIC1Q5VXU3 224 aa33.37■■■□□ 2.93
AP3B1-208ENST00000523204 SENP3Q9H4L4 574 aaPredicted RBP29.94■■■□□ 2.38
AP3B1-208ENST00000523204 PHF23Q9BUL5 403 aaPredicted RBP29.53■■■□□ 2.32
AP3B1-208ENST00000523204 FOXD1Q16676 465 aa27.86■■■□□ 2.05
AP3B1-208ENST00000523204 PLPPR3Q6T4P5 718 aa26.71■■□□□ 1.87
AP3B1-208ENST00000523204 MSH5O43196 834 aa26.1■■□□□ 1.77
AP3B1-208ENST00000523204 PIAS4Q8N2W9 510 aaPredicted RBP26.09■■□□□ 1.77
AP3B1-208ENST00000523204 PPP6R1Q9UPN7 881 aa26.06■■□□□ 1.76
AP3B1-208ENST00000523204 ADRA2BP18089 450 aa26.01■■□□□ 1.75
AP3B1-208ENST00000523204 POTEDQ86YR6 584 aa25.34■■□□□ 1.65
AP3B1-208ENST00000523204 SCAF1Q9H7N4 1312 aaKnown RBP23.87■■□□□ 1.41
AP3B1-208ENST00000523204 MAPK8IP2Q13387 824 aaPredicted RBP23.86■■□□□ 1.41
AP3B1-208ENST00000523204 DMRT2Q9Y5R5 561 aa23.74■■□□□ 1.39
AP3B1-208ENST00000523204 PPP4R3CPQ6ZMV5 832 aa23.41■■□□□ 1.34
AP3B1-208ENST00000523204 CNKSR2Q8WXI2 1034 aa22.97■■□□□ 1.27
AP3B1-208ENST00000523204 HOXD11P31277 338 aaPredicted RBP22.88■■□□□ 1.25
AP3B1-208ENST00000523204 DCAF8L1A6NGE4 600 aa22.8■■□□□ 1.24
AP3B1-208ENST00000523204 RNF216Q9NWF9 866 aaPredicted RBP22.74■■□□□ 1.23
AP3B1-208ENST00000523204 NCBP3Q53F19 620 aaKnown RBP22.57■■□□□ 1.2
AP3B1-208ENST00000523204 CACNB1Q02641 598 aaPredicted RBP22.36■■□□□ 1.17
AP3B1-208ENST00000523204 RNF39Q9H2S5 420 aa22.24■■□□□ 1.15
AP3B1-208ENST00000523204 NPM3O75607 178 aaKnown RBP22.19■■□□□ 1.14
AP3B1-208ENST00000523204 DNAJC5BQ9UF47 199 aa22.09■■□□□ 1.13
AP3B1-208ENST00000523204 NISCHQ9Y2I1 1504 aa22.01■■□□□ 1.11
AP3B1-208ENST00000523204 C1QBPQ07021 282 aaKnown RBP21.95■■□□□ 1.1
AP3B1-208ENST00000523204 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.84■■□□□ 1.09
AP3B1-208ENST00000523204 KCNA4P22459 653 aa21.82■■□□□ 1.08
AP3B1-208ENST00000523204 U3KPZ7 1027 aaPredicted RBP21.35■■□□□ 1.01
AP3B1-208ENST00000523204 SLC4A2P04920 1241 aa21.16■□□□□ 0.98
AP3B1-208ENST00000523204 CAPN15O75808 1086 aa21.02■□□□□ 0.96
AP3B1-208ENST00000523204 SPINK5Q9NQ38 1064 aaPredicted RBP21.01■□□□□ 0.95
AP3B1-208ENST00000523204 ABCC9O60706 1549 aa20.88■□□□□ 0.93
AP3B1-208ENST00000523204 DSG3P32926 999 aa20.85■□□□□ 0.93
AP3B1-208ENST00000523204 APLP2Q06481 763 aa20.85■□□□□ 0.93
AP3B1-208ENST00000523204 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.82■□□□□ 0.92
AP3B1-208ENST00000523204 HNRNPUL2Q1KMD3 747 aaKnown RBP20.82■□□□□ 0.92
AP3B1-208ENST00000523204 TRHP20396 242 aaPredicted RBP20.69■□□□□ 0.9
AP3B1-208ENST00000523204 SAMD1Q6SPF0 538 aaPredicted RBP20.69■□□□□ 0.9
AP3B1-208ENST00000523204 ZNF219Q9P2Y4 722 aaPredicted RBP20.67■□□□□ 0.9
AP3B1-208ENST00000523204 SLC4A1APQ9BWU0 796 aaKnown RBP20.64■□□□□ 0.89
AP3B1-208ENST00000523204 MYCNP04198 464 aaPredicted RBP20.56■□□□□ 0.88
AP3B1-208ENST00000523204 ABCB7O75027 752 aa20.52■□□□□ 0.88
AP3B1-208ENST00000523204 FOXD4L1Q9NU39 408 aa20.36■□□□□ 0.85
AP3B1-208ENST00000523204 POLA2Q14181 598 aa20.14■□□□□ 0.81
AP3B1-208ENST00000523204 ZBTB22O15209 634 aa20.03■□□□□ 0.8
AP3B1-208ENST00000523204 ATF5Q9Y2D1 282 aaPredicted RBP20.02■□□□□ 0.8
AP3B1-208ENST00000523204 CCDC180Q9P1Z9 1646 aa19.96■□□□□ 0.79
AP3B1-208ENST00000523204 RBM42Q9BTD8 480 aaKnown RBP19.95■□□□□ 0.78
AP3B1-208ENST00000523204 POTEHQ6S545 545 aa19.88■□□□□ 0.77
AP3B1-208ENST00000523204 ZBTB12Q9Y330 459 aaPredicted RBP19.79■□□□□ 0.76
AP3B1-208ENST00000523204 ATXN8OSP0DMR3 200 aa19.74■□□□□ 0.75
AP3B1-208ENST00000523204 OSCARQ8IYS5 282 aa19.5■□□□□ 0.71
AP3B1-208ENST00000523204 AKT1S1Q96B36 256 aa19.47■□□□□ 0.71
AP3B1-208ENST00000523204 CHRDL2Q6WN34 429 aa19.46■□□□□ 0.71
AP3B1-208ENST00000523204 RB1CC1Q8TDY2 1594 aa19.44■□□□□ 0.7
AP3B1-208ENST00000523204 PABPN1Q86U42 306 aaKnown RBP eCLIP19.39■□□□□ 0.69
AP3B1-208ENST00000523204 FBLN2P98095 1184 aa19.32■□□□□ 0.68
AP3B1-208ENST00000523204 REM2Q8IYK8 340 aaPredicted RBP19.27■□□□□ 0.68
AP3B1-208ENST00000523204 CSRNP3Q8WYN3 585 aa19.17■□□□□ 0.66
AP3B1-208ENST00000523204 DCAF8L2P0C7V8 631 aa19.16■□□□□ 0.66
AP3B1-208ENST00000523204 SPDYE2BA6NHP3 402 aa19.15■□□□□ 0.66
AP3B1-208ENST00000523204 SPDYE6P0CI01 402 aa19.15■□□□□ 0.66
AP3B1-208ENST00000523204 SPDYE2Q495Y8 402 aa19.15■□□□□ 0.66
AP3B1-208ENST00000523204 MKRN4PQ13434 485 aaPredicted RBP19.11■□□□□ 0.65
AP3B1-208ENST00000523204 NACADO15069 1562 aa19.1■□□□□ 0.65
AP3B1-208ENST00000523204 PITPNM1O00562 1244 aa19.07■□□□□ 0.64
AP3B1-208ENST00000523204 DNAJC5Q9H3Z4 198 aa19.03■□□□□ 0.64
AP3B1-208ENST00000523204 PIP4P2Q8N4L2 257 aa19■□□□□ 0.63
AP3B1-208ENST00000523204 EHMT2Q96KQ7 1210 aa19■□□□□ 0.63
AP3B1-208ENST00000523204 ZNF692Q9BU19 519 aaPredicted RBP18.93■□□□□ 0.62
AP3B1-208ENST00000523204 FXR2P51116 673 aaKnown RBP eCLIP18.88■□□□□ 0.61
AP3B1-208ENST00000523204 SSUH2Q9Y2M2 353 aa18.88■□□□□ 0.61
AP3B1-208ENST00000523204 CECR2Q9BXF3 1484 aa18.85■□□□□ 0.61
AP3B1-208ENST00000523204 BICRAQ9NZM4 1560 aa18.84■□□□□ 0.61
AP3B1-208ENST00000523204 UNC13AQ9UPW8 1703 aa18.83■□□□□ 0.6
AP3B1-208ENST00000523204 SPDYE1Q8NFV5 336 aaPredicted RBP18.81■□□□□ 0.6
AP3B1-208ENST00000523204 CLEC11AQ9Y240 323 aa18.77■□□□□ 0.6
AP3B1-208ENST00000523204 CC2D2AQ9P2K1 1620 aa18.71■□□□□ 0.59
AP3B1-208ENST00000523204 SP7Q8TDD2 431 aaPredicted RBP18.68■□□□□ 0.58
AP3B1-208ENST00000523204 HAX1O00165 279 aa18.66■□□□□ 0.58
AP3B1-208ENST00000523204 PRKAR2AP13861 404 aaKnown RBP18.59■□□□□ 0.57
AP3B1-208ENST00000523204 MYO15BQ96JP2 1530 aa18.54■□□□□ 0.56
AP3B1-208ENST00000523204 SHROOM4Q9ULL8 1493 aa18.52■□□□□ 0.55
AP3B1-208ENST00000523204 EIF4G1Q04637 1599 aaKnown RBP18.5■□□□□ 0.55
AP3B1-208ENST00000523204 PRR29P0C7W0 189 aa18.47■□□□□ 0.55
AP3B1-208ENST00000523204 CHADLQ6NUI6 762 aa18.38■□□□□ 0.53
AP3B1-208ENST00000523204 EVX2Q03828 476 aa18.36■□□□□ 0.53
AP3B1-208ENST00000523204 SCRIBQ14160 1630 aa18.31■□□□□ 0.52
AP3B1-208ENST00000523204 C19orf67A6NJJ6 358 aa18.28■□□□□ 0.52
AP3B1-208ENST00000523204 SPDYE4A6NLX3 237 aa18.28■□□□□ 0.52
AP3B1-208ENST00000523204 CUX2O14529 1486 aa18.2■□□□□ 0.5
AP3B1-208ENST00000523204 STAG3Q9UJ98 1225 aa18.17■□□□□ 0.5
AP3B1-208ENST00000523204 FARP1Q9Y4F1 1045 aaPredicted RBP18.12■□□□□ 0.49
AP3B1-208ENST00000523204 ERCC6Q03468 1493 aa18.12■□□□□ 0.49
AP3B1-208ENST00000523204 ZCCHC6Q5VYS8 1495 aaKnown RBP18.09■□□□□ 0.49
AP3B1-208ENST00000523204 TRIM41Q8WV44 630 aa18.08■□□□□ 0.48
AP3B1-208ENST00000523204 DCAF1Q9Y4B6 1507 aa18.05■□□□□ 0.48
AP3B1-208ENST00000523204 CD44P16070 742 aaKnown RBP18.02■□□□□ 0.48
AP3B1-208ENST00000523204 GABBR2O75899 941 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms