RNA–Protein interactions for RNA: ENST00000259460.12

RABEPK-201, Transcript of Rab9 effector protein with kelch motifs, humanhuman

TSL 1 (best) BASIC

Gene RABEPK, Length 1,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABEPK-201ENST00000259460 NISCHQ9Y2I1 1504 aa38.02■■■■□ 3.68
RABEPK-201ENST00000259460 ABCC9O60706 1549 aa35.96■■■■□ 3.35
RABEPK-201ENST00000259460 CCDC180Q9P1Z9 1646 aa34.78■■■■□ 3.16
RABEPK-201ENST00000259460 DNAJC5BQ9UF47 199 aa34.74■■■■□ 3.15
RABEPK-201ENST00000259460 RB1CC1Q8TDY2 1594 aa33.67■■■□□ 2.98
RABEPK-201ENST00000259460 PABPN1Q86U42 306 aaKnown RBP eCLIP33.19■■■□□ 2.9
RABEPK-201ENST00000259460 NACADO15069 1562 aa33.09■■■□□ 2.89
RABEPK-201ENST00000259460 UNC13AQ9UPW8 1703 aa33.01■■■□□ 2.87
RABEPK-201ENST00000259460 DNAJC5Q9H3Z4 198 aa32.79■■■□□ 2.84
RABEPK-201ENST00000259460 BICRAQ9NZM4 1560 aa32.74■■■□□ 2.83
RABEPK-201ENST00000259460 DCAF8L2P0C7V8 631 aa32.56■■■□□ 2.8
RABEPK-201ENST00000259460 CECR2Q9BXF3 1484 aa32.51■■■□□ 2.79
RABEPK-201ENST00000259460 CC2D2AQ9P2K1 1620 aa32.44■■■□□ 2.78
RABEPK-201ENST00000259460 MYO15BQ96JP2 1530 aa32.16■■■□□ 2.74
RABEPK-201ENST00000259460 SHROOM4Q9ULL8 1493 aa32.13■■■□□ 2.73
RABEPK-201ENST00000259460 EIF4G1Q04637 1599 aaKnown RBP32.05■■■□□ 2.72
RABEPK-201ENST00000259460 SCRIBQ14160 1630 aa31.63■■■□□ 2.65
RABEPK-201ENST00000259460 CUX2O14529 1486 aa31.49■■■□□ 2.63
RABEPK-201ENST00000259460 DCAF1Q9Y4B6 1507 aa31.3■■■□□ 2.6
RABEPK-201ENST00000259460 ZCCHC6Q5VYS8 1495 aaKnown RBP31.28■■■□□ 2.6
RABEPK-201ENST00000259460 ERCC6Q03468 1493 aa31.15■■■□□ 2.58
RABEPK-201ENST00000259460 TRIM41Q8WV44 630 aa30.94■■■□□ 2.54
RABEPK-201ENST00000259460 THOC2Q8NI27 1593 aaKnown RBP30.55■■■□□ 2.48
RABEPK-201ENST00000259460 NESP48681 1621 aa30.52■■■□□ 2.48
RABEPK-201ENST00000259460 NCAPD3P42695 1498 aa30.51■■■□□ 2.47
RABEPK-201ENST00000259460 SMARCA2P51531 1590 aa30.29■■■□□ 2.44
RABEPK-201ENST00000259460 ATAD2BQ9ULI0 1458 aa30.28■■■□□ 2.44
RABEPK-201ENST00000259460 HMGXB3Q12766 1538 aa30.26■■■□□ 2.43
RABEPK-201ENST00000259460 KIF21AQ7Z4S6 1674 aa30.19■■■□□ 2.42
RABEPK-201ENST00000259460 LAMC3Q9Y6N6 1575 aa30.11■■■□□ 2.41
RABEPK-201ENST00000259460 BAZ1AQ9NRL2 1556 aaPredicted RBP30.02■■■□□ 2.4
RABEPK-201ENST00000259460 SMARCA4P51532 1647 aa30■■■□□ 2.39
RABEPK-201ENST00000259460 BAZ1BQ9UIG0 1483 aaKnown RBP29.95■■■□□ 2.39
RABEPK-201ENST00000259460 PDS5BQ9NTI5 1447 aa29.91■■■□□ 2.38
RABEPK-201ENST00000259460 MRC2Q9UBG0 1479 aa29.79■■■□□ 2.36
RABEPK-201ENST00000259460 WDR62O43379 1518 aa29.78■■■□□ 2.36
RABEPK-201ENST00000259460 OSCARQ8IYS5 282 aa29.71■■■□□ 2.35
RABEPK-201ENST00000259460 PEG3Q9GZU2 1588 aa29.67■■■□□ 2.34
RABEPK-201ENST00000259460 RIMBP3CA6NJZ7 1639 aa29.66■■■□□ 2.34
RABEPK-201ENST00000259460 RIMBP3BA6NNM3 1639 aa29.66■■■□□ 2.34
RABEPK-201ENST00000259460 RIMBP3Q9UFD9 1639 aa29.66■■■□□ 2.34
RABEPK-201ENST00000259460 CADPSQ9ULU8 1353 aa29.51■■■□□ 2.31
RABEPK-201ENST00000259460 CEP164Q9UPV0 1460 aa29.43■■■□□ 2.3
RABEPK-201ENST00000259460 ARHGEF11O15085 1522 aa29.41■■■□□ 2.3
RABEPK-201ENST00000259460 AEBP2Q6ZN18 517 aaPredicted RBP29.36■■■□□ 2.29
RABEPK-201ENST00000259460 MROH2BQ7Z745 1585 aa29.31■■■□□ 2.28
RABEPK-201ENST00000259460 TRHP20396 242 aaPredicted RBP29.27■■■□□ 2.28
RABEPK-201ENST00000259460 FANCD2Q9BXW9 1451 aa29.25■■■□□ 2.27
RABEPK-201ENST00000259460 CYB5RLQ6IPT4 315 aa29.15■■■□□ 2.26
RABEPK-201ENST00000259460 URB2Q14146 1524 aaKnown RBP29.12■■■□□ 2.25
RABEPK-201ENST00000259460 ARAP1Q96P48 1450 aa29.03■■■□□ 2.24
RABEPK-201ENST00000259460 ZNF608Q9ULD9 1512 aaPredicted RBP28.96■■■□□ 2.23
RABEPK-201ENST00000259460 WIZO95785 1651 aa28.95■■■□□ 2.22
RABEPK-201ENST00000259460 CFTRP13569 1480 aa28.94■■■□□ 2.22
RABEPK-201ENST00000259460 CHD1O14646 1710 aa28.87■■■□□ 2.21
RABEPK-201ENST00000259460 IFT140Q96RY7 1462 aa28.85■■■□□ 2.21
RABEPK-201ENST00000259460 EIF4G3O43432 1585 aaKnown RBP28.82■■■□□ 2.2
RABEPK-201ENST00000259460 RSF1Q96T23 1441 aaPredicted RBP28.75■■■□□ 2.19
RABEPK-201ENST00000259460 PRDM2Q13029 1718 aa28.72■■■□□ 2.19
RABEPK-201ENST00000259460 TOPBP1Q92547 1522 aa28.57■■■□□ 2.16
RABEPK-201ENST00000259460 FBLN2P98095 1184 aa28.54■■■□□ 2.16
RABEPK-201ENST00000259460 AQRO60306 1485 aaKnown RBP eCLIP28.5■■■□□ 2.15
RABEPK-201ENST00000259460 TOP2AP11388 1531 aaKnown RBP28.47■■■□□ 2.15
RABEPK-201ENST00000259460 TARBP1Q13395 1621 aaKnown RBP28.44■■■□□ 2.14
RABEPK-201ENST00000259460 CLASP1Q7Z460 1538 aa28.44■■■□□ 2.14
RABEPK-201ENST00000259460 DNMBPQ6XZF7 1577 aa28.38■■■□□ 2.13
RABEPK-201ENST00000259460 ABCC8Q09428 1581 aa28.35■■■□□ 2.13
RABEPK-201ENST00000259460 SYNJ1O43426 1573 aa28.3■■■□□ 2.12
RABEPK-201ENST00000259460 ILDR1Q86SU0 546 aaPredicted RBP28.29■■■□□ 2.12
RABEPK-201ENST00000259460 SNAPC4Q5SXM2 1469 aa28.23■■■□□ 2.11
RABEPK-201ENST00000259460 POLA1P09884 1462 aaPredicted RBP28.2■■■□□ 2.1
RABEPK-201ENST00000259460 GAPVD1Q14C86 1478 aa28.19■■■□□ 2.1
RABEPK-201ENST00000259460 RAD54L2Q9Y4B4 1467 aa28.11■■■□□ 2.09
RABEPK-201ENST00000259460 TDRD9Q8NDG6 1382 aaKnown RBP28.1■■■□□ 2.09
RABEPK-201ENST00000259460 CCDC88BA6NC98 1476 aa28.09■■■□□ 2.09
RABEPK-201ENST00000259460 CHMP7Q8WUX9 453 aaPredicted RBP28.08■■■□□ 2.09
RABEPK-201ENST00000259460 MAGI1Q96QZ7 1491 aaPredicted RBP28.06■■■□□ 2.08
RABEPK-201ENST00000259460 WDR97A6NE52 1622 aa28.05■■■□□ 2.08
RABEPK-201ENST00000259460 KIF13AQ9H1H9 1805 aa28.01■■■□□ 2.07
RABEPK-201ENST00000259460 SYNJ2O15056 1496 aa27.99■■■□□ 2.07
RABEPK-201ENST00000259460 SOGA1O94964 1423 aa27.97■■■□□ 2.07
RABEPK-201ENST00000259460 GRIN2BQ13224 1484 aa27.92■■■□□ 2.06
RABEPK-201ENST00000259460 ERCC6L2Q5T890 1561 aa27.91■■■□□ 2.06
RABEPK-201ENST00000259460 PBRM1Q86U86 1689 aa27.86■■■□□ 2.05
RABEPK-201ENST00000259460 FGD5Q6ZNL6 1462 aa27.85■■■□□ 2.05
RABEPK-201ENST00000259460 KDM4FA0A1W2PPD8 638 aa27.8■■■□□ 2.04
RABEPK-201ENST00000259460 CEP170Q5SW79 1584 aa27.72■■■□□ 2.03
RABEPK-201ENST00000259460 KDM6BO15054 1643 aa27.66■■■□□ 2.02
RABEPK-201ENST00000259460 CUX1P39880 1505 aa27.63■■■□□ 2.01
RABEPK-201ENST00000259460 SHROOM2Q13796 1616 aa27.6■■■□□ 2.01
RABEPK-201ENST00000259460 GRIN2AQ12879 1464 aa27.59■■■□□ 2.01
RABEPK-201ENST00000259460 ABCA5Q8WWZ7 1642 aa27.58■■■□□ 2.01
RABEPK-201ENST00000259460 ABCC10Q5T3U5 1492 aa27.57■■■□□ 2
RABEPK-201ENST00000259460 DIP2BQ9P265 1576 aa27.56■■■□□ 2
RABEPK-201ENST00000259460 FAM69CQ0P6D2 419 aa27.55■■■□□ 2
RABEPK-201ENST00000259460 NUP160Q12769 1436 aa27.52■■■□□ 2
RABEPK-201ENST00000259460 ADAMTS12P58397 1594 aa27.49■■□□□ 1.99
RABEPK-201ENST00000259460 HECW2Q9P2P5 1572 aa27.47■■□□□ 1.99
RABEPK-201ENST00000259460 MAPKBP1O60336 1514 aa27.46■■□□□ 1.99
RABEPK-201ENST00000259460 TSPOAP1O95153 1857 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms