RNA–Protein interactions for RNA: ENST00000394125.8

RABEPK-204, Transcript of Rab9 effector protein with kelch motifs, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABEPK, Length 1,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABEPK-204ENST00000394125 NISCHQ9Y2I1 1504 aa46.94■■■■■ 5.1
RABEPK-204ENST00000394125 CCDC180Q9P1Z9 1646 aa41.41■■■■■ 4.22
RABEPK-204ENST00000394125 ABCC9O60706 1549 aa40.1■■■■■ 4.01
RABEPK-204ENST00000394125 ZCCHC6Q5VYS8 1495 aaKnown RBP39.22■■■■□ 3.87
RABEPK-204ENST00000394125 DCAF8L2P0C7V8 631 aa38.99■■■■□ 3.83
RABEPK-204ENST00000394125 DCAF1Q9Y4B6 1507 aa38.85■■■■□ 3.81
RABEPK-204ENST00000394125 NACADO15069 1562 aa38.84■■■■□ 3.81
RABEPK-204ENST00000394125 MYO15BQ96JP2 1530 aa38.83■■■■□ 3.81
RABEPK-204ENST00000394125 RB1CC1Q8TDY2 1594 aa38.75■■■■□ 3.79
RABEPK-204ENST00000394125 SCRIBQ14160 1630 aa37.87■■■■□ 3.65
RABEPK-204ENST00000394125 UNC13AQ9UPW8 1703 aa37.82■■■■□ 3.64
RABEPK-204ENST00000394125 BICRAQ9NZM4 1560 aa37.62■■■■□ 3.61
RABEPK-204ENST00000394125 PABPN1Q86U42 306 aaKnown RBP eCLIP37.6■■■■□ 3.61
RABEPK-204ENST00000394125 SHROOM4Q9ULL8 1493 aa37.4■■■■□ 3.58
RABEPK-204ENST00000394125 EIF4G1Q04637 1599 aaKnown RBP36.56■■■■□ 3.44
RABEPK-204ENST00000394125 CECR2Q9BXF3 1484 aa36.55■■■■□ 3.44
RABEPK-204ENST00000394125 DNAJC5BQ9UF47 199 aa36.42■■■■□ 3.42
RABEPK-204ENST00000394125 BAZ1AQ9NRL2 1556 aaPredicted RBP36.31■■■■□ 3.4
RABEPK-204ENST00000394125 SMARCA4P51532 1647 aa36.27■■■■□ 3.4
RABEPK-204ENST00000394125 CC2D2AQ9P2K1 1620 aa36.26■■■■□ 3.39
RABEPK-204ENST00000394125 MROH2BQ7Z745 1585 aa36.2■■■■□ 3.39
RABEPK-204ENST00000394125 RSF1Q96T23 1441 aaPredicted RBP35.99■■■■□ 3.35
RABEPK-204ENST00000394125 ATAD2BQ9ULI0 1458 aa35.99■■■■□ 3.35
RABEPK-204ENST00000394125 PEG3Q9GZU2 1588 aa35.93■■■■□ 3.34
RABEPK-204ENST00000394125 SMARCA2P51531 1590 aa35.93■■■■□ 3.34
RABEPK-204ENST00000394125 NCAPD3P42695 1498 aa35.9■■■■□ 3.34
RABEPK-204ENST00000394125 WIZO95785 1651 aa35.78■■■■□ 3.32
RABEPK-204ENST00000394125 HMGXB3Q12766 1538 aa35.73■■■■□ 3.31
RABEPK-204ENST00000394125 BAZ1BQ9UIG0 1483 aaKnown RBP35.69■■■■□ 3.3
RABEPK-204ENST00000394125 SUPT5HO00267 1087 aaKnown RBP35.46■■■■□ 3.27
RABEPK-204ENST00000394125 TOP2AP11388 1531 aaKnown RBP35.46■■■■□ 3.27
RABEPK-204ENST00000394125 CCDC88BA6NC98 1476 aa35.07■■■■□ 3.21
RABEPK-204ENST00000394125 CADPSQ9ULU8 1353 aa34.88■■■■□ 3.17
RABEPK-204ENST00000394125 NESP48681 1621 aa34.87■■■■□ 3.17
RABEPK-204ENST00000394125 LAMC3Q9Y6N6 1575 aa34.81■■■■□ 3.16
RABEPK-204ENST00000394125 CFTRP13569 1480 aa34.78■■■■□ 3.16
RABEPK-204ENST00000394125 PDS5BQ9NTI5 1447 aa34.58■■■■□ 3.13
RABEPK-204ENST00000394125 ERCC6Q03468 1493 aa34.48■■■■□ 3.11
RABEPK-204ENST00000394125 FANCD2Q9BXW9 1451 aa34.45■■■■□ 3.11
RABEPK-204ENST00000394125 PRDM2Q13029 1718 aa34.4■■■■□ 3.1
RABEPK-204ENST00000394125 KIF21AQ7Z4S6 1674 aa34.39■■■■□ 3.1
RABEPK-204ENST00000394125 CEP164Q9UPV0 1460 aa34.34■■■■□ 3.09
RABEPK-204ENST00000394125 MRC2Q9UBG0 1479 aa34.2■■■■□ 3.07
RABEPK-204ENST00000394125 THOC2Q8NI27 1593 aaKnown RBP34.18■■■■□ 3.06
RABEPK-204ENST00000394125 URB2Q14146 1524 aaKnown RBP34.1■■■■□ 3.05
RABEPK-204ENST00000394125 WDR62O43379 1518 aa34.06■■■■□ 3.04
RABEPK-204ENST00000394125 TOPBP1Q92547 1522 aa33.97■■■■□ 3.03
RABEPK-204ENST00000394125 ABCC8Q09428 1581 aa33.96■■■■□ 3.03
RABEPK-204ENST00000394125 DNMBPQ6XZF7 1577 aa33.95■■■■□ 3.03
RABEPK-204ENST00000394125 CUX2O14529 1486 aa33.95■■■■□ 3.02
RABEPK-204ENST00000394125 CUX1P39880 1505 aa33.92■■■■□ 3.02
RABEPK-204ENST00000394125 WRNQ14191 1432 aaPredicted RBP eCLIP33.89■■■■□ 3.02
RABEPK-204ENST00000394125 SYNJ1O43426 1573 aa33.77■■■■□ 3
RABEPK-204ENST00000394125 TOP2BQ02880 1626 aa33.74■■■□□ 2.99
RABEPK-204ENST00000394125 POLA1P09884 1462 aaPredicted RBP33.73■■■□□ 2.99
RABEPK-204ENST00000394125 FGD5Q6ZNL6 1462 aa33.71■■■□□ 2.99
RABEPK-204ENST00000394125 BIVM-ERCC5R4GMW8 1640 aa33.7■■■□□ 2.99
RABEPK-204ENST00000394125 IFT140Q96RY7 1462 aa33.62■■■□□ 2.97
RABEPK-204ENST00000394125 SOGA1O94964 1423 aa33.6■■■□□ 2.97
RABEPK-204ENST00000394125 RAD54L2Q9Y4B4 1467 aa33.59■■■□□ 2.97
RABEPK-204ENST00000394125 TARBP1Q13395 1621 aaKnown RBP33.55■■■□□ 2.96
RABEPK-204ENST00000394125 ZNF608Q9ULD9 1512 aaPredicted RBP33.45■■■□□ 2.95
RABEPK-204ENST00000394125 TRIM41Q8WV44 630 aa33.45■■■□□ 2.95
RABEPK-204ENST00000394125 CHIC1Q5VXU3 224 aa33.44■■■□□ 2.94
RABEPK-204ENST00000394125 ABCA10Q8WWZ4 1543 aa33.42■■■□□ 2.94
RABEPK-204ENST00000394125 TDRD9Q8NDG6 1382 aaKnown RBP33.36■■■□□ 2.93
RABEPK-204ENST00000394125 WDR97A6NE52 1622 aa33.35■■■□□ 2.93
RABEPK-204ENST00000394125 AQRO60306 1485 aaKnown RBP eCLIP33.33■■■□□ 2.93
RABEPK-204ENST00000394125 EIF4G3O43432 1585 aaKnown RBP33.28■■■□□ 2.92
RABEPK-204ENST00000394125 GAPVD1Q14C86 1478 aa33.21■■■□□ 2.91
RABEPK-204ENST00000394125 ABCA5Q8WWZ7 1642 aa33.2■■■□□ 2.91
RABEPK-204ENST00000394125 KIF27Q86VH2 1401 aa33.13■■■□□ 2.89
RABEPK-204ENST00000394125 GRIN2BQ13224 1484 aa33.12■■■□□ 2.89
RABEPK-204ENST00000394125 RUSC2Q8N2Y8 1516 aa33.03■■■□□ 2.88
RABEPK-204ENST00000394125 SNAPC4Q5SXM2 1469 aa33.01■■■□□ 2.88
RABEPK-204ENST00000394125 PBRM1Q86U86 1689 aa33.01■■■□□ 2.88
RABEPK-204ENST00000394125 ERICH3Q5RHP9 1530 aa33■■■□□ 2.87
RABEPK-204ENST00000394125 IGF1RP08069 1367 aa32.98■■■□□ 2.87
RABEPK-204ENST00000394125 MAGI1Q96QZ7 1491 aaPredicted RBP32.97■■■□□ 2.87
RABEPK-204ENST00000394125 FHAD1B1AJZ9 1412 aa32.85■■■□□ 2.85
RABEPK-204ENST00000394125 SYNJ2O15056 1496 aa32.85■■■□□ 2.85
RABEPK-204ENST00000394125 ADAMTS12P58397 1594 aa32.85■■■□□ 2.85
RABEPK-204ENST00000394125 EEA1Q15075 1411 aa32.84■■■□□ 2.85
RABEPK-204ENST00000394125 FBLN2P98095 1184 aa32.8■■■□□ 2.84
RABEPK-204ENST00000394125 CHMP7Q8WUX9 453 aaPredicted RBP32.8■■■□□ 2.84
RABEPK-204ENST00000394125 CARMIL1Q5VZK9 1371 aa32.78■■■□□ 2.84
RABEPK-204ENST00000394125 FAM9AQ8IZU1 332 aaPredicted RBP32.76■■■□□ 2.84
RABEPK-204ENST00000394125 CSRNP3Q8WYN3 585 aa32.76■■■□□ 2.84
RABEPK-204ENST00000394125 CUL7Q14999 1698 aa32.75■■■□□ 2.83
RABEPK-204ENST00000394125 CHD1O14646 1710 aa32.71■■■□□ 2.83
RABEPK-204ENST00000394125 GRIN2AQ12879 1464 aa32.7■■■□□ 2.82
RABEPK-204ENST00000394125 PRXQ9BXM0 1461 aa32.67■■■□□ 2.82
RABEPK-204ENST00000394125 OSCARQ8IYS5 282 aa32.66■■■□□ 2.82
RABEPK-204ENST00000394125 RAPGEF2Q9Y4G8 1499 aa32.62■■■□□ 2.81
RABEPK-204ENST00000394125 NUP160Q12769 1436 aa32.56■■■□□ 2.8
RABEPK-204ENST00000394125 CEP170Q5SW79 1584 aa32.51■■■□□ 2.79
RABEPK-204ENST00000394125 CLASP1Q7Z460 1538 aa32.45■■■□□ 2.79
RABEPK-204ENST00000394125 KIF21BO75037 1637 aa32.43■■■□□ 2.78
RABEPK-204ENST00000394125 KIAA0586Q9BVV6 1533 aa32.37■■■□□ 2.77
RABEPK-204ENST00000394125 DNAJC5Q9H3Z4 198 aa32.34■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms