RNA–Protein interactions for RNA: ENST00000239231.6

PANK3-201, Transcript of pantothenate kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PANK3, Length 10,506 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PANK3-201ENST00000239231 DCAF8L2P0C7V8 631 aa21.64■■□□□ 1.05
PANK3-201ENST00000239231 SUPT5HO00267 1087 aaKnown RBP20.15■□□□□ 0.82
PANK3-201ENST00000239231 EHMT2Q96KQ7 1210 aa19.96■□□□□ 0.79
PANK3-201ENST00000239231 SHROOM4Q9ULL8 1493 aa19.84■□□□□ 0.77
PANK3-201ENST00000239231 NISCHQ9Y2I1 1504 aa19.57■□□□□ 0.72
PANK3-201ENST00000239231 APLP2Q06481 763 aa19.38■□□□□ 0.69
PANK3-201ENST00000239231 FAM9AQ8IZU1 332 aaPredicted RBP19.25■□□□□ 0.67
PANK3-201ENST00000239231 TTBK1Q5TCY1 1321 aaPredicted RBP19.24■□□□□ 0.67
PANK3-201ENST00000239231 PELP1Q8IZL8 1130 aaKnown RBP19.21■□□□□ 0.67
PANK3-201ENST00000239231 RANGAP1P46060 587 aaPredicted RBP19.1■□□□□ 0.65
PANK3-201ENST00000239231 ATP1B4Q9UN42 357 aaPredicted RBP18.98■□□□□ 0.63
PANK3-201ENST00000239231 PCGF6Q9BYE7 350 aa18.78■□□□□ 0.6
PANK3-201ENST00000239231 TRIM41Q8WV44 630 aa18.57■□□□□ 0.56
PANK3-201ENST00000239231 ERICH6Q7L0X2 663 aa18.57■□□□□ 0.56
PANK3-201ENST00000239231 UBTFP17480 764 aaKnown RBP18.56■□□□□ 0.56
PANK3-201ENST00000239231 CCER1Q8TC90 406 aaPredicted RBP18.53■□□□□ 0.56
PANK3-201ENST00000239231 MYT1LQ9UL68 1186 aa18.41■□□□□ 0.54
PANK3-201ENST00000239231 CENPBP07199 599 aaPredicted RBP18.34■□□□□ 0.53
PANK3-201ENST00000239231 PPARGC1BQ86YN6 1023 aaKnown RBP18.28■□□□□ 0.52
PANK3-201ENST00000239231 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.26■□□□□ 0.51
PANK3-201ENST00000239231 HNRNPUL2Q1KMD3 747 aaKnown RBP18.26■□□□□ 0.51
PANK3-201ENST00000239231 YTHDC1Q96MU7 727 aaKnown RBP18.25■□□□□ 0.51
PANK3-201ENST00000239231 CHIC1Q5VXU3 224 aa18.24■□□□□ 0.51
PANK3-201ENST00000239231 NEFLP07196 543 aa18.2■□□□□ 0.5
PANK3-201ENST00000239231 ZEB1P37275 1124 aaPredicted RBP18.19■□□□□ 0.5
PANK3-201ENST00000239231 POLR3GLQ9BT43 218 aa18.16■□□□□ 0.5
PANK3-201ENST00000239231 ITGAEP38570 1179 aa18.13■□□□□ 0.49
PANK3-201ENST00000239231 CNGB1Q14028 1251 aaPredicted RBP18.04■□□□□ 0.48
PANK3-201ENST00000239231 SLC4A1APQ9BWU0 796 aaKnown RBP17.99■□□□□ 0.47
PANK3-201ENST00000239231 DAXXQ9UER7 740 aaPredicted RBP17.88■□□□□ 0.45
PANK3-201ENST00000239231 MYT1Q01538 1121 aa17.73■□□□□ 0.43
PANK3-201ENST00000239231 TRIM26Q12899 539 aaPredicted RBP17.68■□□□□ 0.42
PANK3-201ENST00000239231 LOC105371045A0A1W2PR82 267 aa17.62■□□□□ 0.41
PANK3-201ENST00000239231 FAM50AQ14320 339 aaKnown RBP17.58■□□□□ 0.4
PANK3-201ENST00000239231 CLSPNQ9HAW4 1339 aa17.55■□□□□ 0.4
PANK3-201ENST00000239231 PABPN1Q86U42 306 aaKnown RBP eCLIP17.54■□□□□ 0.4
PANK3-201ENST00000239231 FBLN2P98095 1184 aa17.53■□□□□ 0.4
PANK3-201ENST00000239231 TRIM52Q96A61 297 aa17.51■□□□□ 0.39
PANK3-201ENST00000239231 SLC24A1O60721 1099 aa17.48■□□□□ 0.39
PANK3-201ENST00000239231 ABCC9O60706 1549 aa17.47■□□□□ 0.39
PANK3-201ENST00000239231 ZNF316A6NFI3 1004 aaPredicted RBP17.44■□□□□ 0.38
PANK3-201ENST00000239231 HRCP23327 699 aa17.44■□□□□ 0.38
PANK3-201ENST00000239231 BCANQ96GW7 911 aa17.42■□□□□ 0.38
PANK3-201ENST00000239231 ZNF326Q5BKZ1 582 aaKnown RBP17.41■□□□□ 0.38
PANK3-201ENST00000239231 NEUROD1Q13562 356 aa17.4■□□□□ 0.38
PANK3-201ENST00000239231 BCL11AQ9H165 835 aa17.38■□□□□ 0.37
PANK3-201ENST00000239231 ARID3CA6NKF2 412 aa17.28■□□□□ 0.36
PANK3-201ENST00000239231 ZBTB47Q9UFB7 747 aaPredicted RBP17.25■□□□□ 0.35
PANK3-201ENST00000239231 PLPPR3Q6T4P5 718 aa17.24■□□□□ 0.35
PANK3-201ENST00000239231 RTL5Q5HYW3 569 aaPredicted RBP17.21■□□□□ 0.35
PANK3-201ENST00000239231 DIEXFQ68CQ4 756 aaKnown RBP17.2■□□□□ 0.34
PANK3-201ENST00000239231 P3H3Q8IVL6 736 aa17.15■□□□□ 0.34
PANK3-201ENST00000239231 CANXP27824 592 aaKnown RBP17.14■□□□□ 0.33
PANK3-201ENST00000239231 NEFMP07197 916 aa17.11■□□□□ 0.33
PANK3-201ENST00000239231 ZNF777Q9ULD5 760 aaPredicted RBP17.1■□□□□ 0.33
PANK3-201ENST00000239231 ESF1Q9H501 851 aaKnown RBP17.09■□□□□ 0.33
PANK3-201ENST00000239231 ANP32CO43423 234 aa17.07■□□□□ 0.32
PANK3-201ENST00000239231 STAG3Q9UJ98 1225 aa17■□□□□ 0.31
PANK3-201ENST00000239231 CHGAP10645 457 aaKnown RBP16.96■□□□□ 0.31
PANK3-201ENST00000239231 CDK11AQ9UQ88 783 aaPredicted RBP16.88■□□□□ 0.29
PANK3-201ENST00000239231 NPM1P06748 294 aaKnown RBP eCLIP16.85■□□□□ 0.29
PANK3-201ENST00000239231 SCAF1Q9H7N4 1312 aaKnown RBP16.85■□□□□ 0.29
PANK3-201ENST00000239231 SCRIBQ14160 1630 aa16.79■□□□□ 0.28
PANK3-201ENST00000239231 A0A0G2JS52 829 aa16.79■□□□□ 0.28
PANK3-201ENST00000239231 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.76■□□□□ 0.27
PANK3-201ENST00000239231 GTF3C3Q9Y5Q9 886 aa16.74■□□□□ 0.27
PANK3-201ENST00000239231 PLEKHG5O94827 1062 aa16.74■□□□□ 0.27
PANK3-201ENST00000239231 SENP3Q9H4L4 574 aaPredicted RBP16.73■□□□□ 0.27
PANK3-201ENST00000239231 NPM2Q86SE8 214 aaKnown RBP16.73■□□□□ 0.27
PANK3-201ENST00000239231 HSP90AA1P07900 732 aaKnown RBP16.69■□□□□ 0.26
PANK3-201ENST00000239231 SALL2Q9Y467 1007 aaPredicted RBP16.69■□□□□ 0.26
PANK3-201ENST00000239231 CSRNP3Q8WYN3 585 aa16.65■□□□□ 0.26
PANK3-201ENST00000239231 ANP32AP39687 249 aaKnown RBP16.64■□□□□ 0.25
PANK3-201ENST00000239231 ZBTB7CA1YPR0 619 aa16.63■□□□□ 0.25
PANK3-201ENST00000239231 TONSLQ96HA7 1378 aa16.63■□□□□ 0.25
PANK3-201ENST00000239231 CHIC2Q9UKJ5 165 aa16.63■□□□□ 0.25
PANK3-201ENST00000239231 C14orf37Q86TY3 774 aa16.58■□□□□ 0.24
PANK3-201ENST00000239231 FAM9BQ8IZU0 186 aa16.58■□□□□ 0.24
PANK3-201ENST00000239231 KDM2AQ9Y2K7 1162 aa16.57■□□□□ 0.24
PANK3-201ENST00000239231 CHMP7Q8WUX9 453 aaPredicted RBP16.54■□□□□ 0.24
PANK3-201ENST00000239231 ANP32BQ92688 251 aaKnown RBP16.53■□□□□ 0.24
PANK3-201ENST00000239231 UPF2Q9HAU5 1272 aaKnown RBP16.53■□□□□ 0.24
PANK3-201ENST00000239231 HNRNPUQ00839 825 aaKnown RBP eCLIP16.51■□□□□ 0.23
PANK3-201ENST00000239231 TMC1Q8TDI8 760 aa16.48■□□□□ 0.23
PANK3-201ENST00000239231 WDR43Q15061 677 aaKnown RBP eCLIP16.47■□□□□ 0.23
PANK3-201ENST00000239231 TSPY4P0CV99 314 aa16.47■□□□□ 0.23
PANK3-201ENST00000239231 TSPY10P0CW01 314 aa16.47■□□□□ 0.23
PANK3-201ENST00000239231 DDX10Q13206 875 aaKnown RBP16.47■□□□□ 0.23
PANK3-201ENST00000239231 KCNH8Q96L42 1107 aa16.47■□□□□ 0.23
PANK3-201ENST00000239231 ARID4BQ4LE39 1312 aaPredicted RBP16.46■□□□□ 0.23
PANK3-201ENST00000239231 PPP1R15AO75807 674 aaPredicted RBP16.46■□□□□ 0.23
PANK3-201ENST00000239231 HAP1P54257 671 aaPredicted RBP16.45■□□□□ 0.22
PANK3-201ENST00000239231 FKBP8Q14318 412 aa16.45■□□□□ 0.22
PANK3-201ENST00000239231 ARXQ96QS3 562 aa16.41■□□□□ 0.22
PANK3-201ENST00000239231 MTUS2Q5JR59 1369 aa16.39■□□□□ 0.21
PANK3-201ENST00000239231 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.39■□□□□ 0.21
PANK3-201ENST00000239231 MYH16Q9H6N6 1097 aa16.36■□□□□ 0.21
PANK3-201ENST00000239231 HIRIP3Q9BW71 556 aaPredicted RBP16.33■□□□□ 0.21
PANK3-201ENST00000239231 CCDC136Q96JN2 1154 aa16.32■□□□□ 0.2
PANK3-201ENST00000239231 CDK11BP21127 795 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms