RNA–Protein interactions for RNA: ENST00000416872.6

ITIH3-201, Transcript of inter-alpha-trypsin inhibitor heavy chain 3, humanhuman

TSL 2 BASIC

Gene ITIH3, Length 2,220 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITIH3-201ENST00000416872 NISCHQ9Y2I1 1504 aa23.69■■□□□ 1.38
ITIH3-201ENST00000416872 CCDC180Q9P1Z9 1646 aa20.61■□□□□ 0.89
ITIH3-201ENST00000416872 ZCCHC6Q5VYS8 1495 aaKnown RBP20.03■□□□□ 0.8
ITIH3-201ENST00000416872 SHROOM4Q9ULL8 1493 aa20■□□□□ 0.79
ITIH3-201ENST00000416872 ABCC9O60706 1549 aa19.85■□□□□ 0.77
ITIH3-201ENST00000416872 DCAF8L2P0C7V8 631 aa19.64■□□□□ 0.74
ITIH3-201ENST00000416872 SUPT5HO00267 1087 aaKnown RBP19.47■□□□□ 0.71
ITIH3-201ENST00000416872 DCAF1Q9Y4B6 1507 aa19.46■□□□□ 0.71
ITIH3-201ENST00000416872 NACADO15069 1562 aa19.28■□□□□ 0.68
ITIH3-201ENST00000416872 MYO15BQ96JP2 1530 aa19.26■□□□□ 0.67
ITIH3-201ENST00000416872 RB1CC1Q8TDY2 1594 aa19.22■□□□□ 0.67
ITIH3-201ENST00000416872 SCRIBQ14160 1630 aa19■□□□□ 0.63
ITIH3-201ENST00000416872 HRCP23327 699 aa18.88■□□□□ 0.61
ITIH3-201ENST00000416872 CHIC1Q5VXU3 224 aa18.82■□□□□ 0.6
ITIH3-201ENST00000416872 UNC13AQ9UPW8 1703 aa18.78■□□□□ 0.6
ITIH3-201ENST00000416872 PABPN1Q86U42 306 aaKnown RBP eCLIP18.67■□□□□ 0.584e-12■■■□□ 15.1
ITIH3-201ENST00000416872 RSF1Q96T23 1441 aaPredicted RBP18.63■□□□□ 0.57
ITIH3-201ENST00000416872 BICRAQ9NZM4 1560 aa18.6■□□□□ 0.57
ITIH3-201ENST00000416872 PCGF6Q9BYE7 350 aa18.59■□□□□ 0.57
ITIH3-201ENST00000416872 CECR2Q9BXF3 1484 aa18.47■□□□□ 0.55
ITIH3-201ENST00000416872 MROH2BQ7Z745 1585 aa18.41■□□□□ 0.54
ITIH3-201ENST00000416872 PPARGC1BQ86YN6 1023 aaKnown RBP18.39■□□□□ 0.54
ITIH3-201ENST00000416872 WIZO95785 1651 aa18.33■□□□□ 0.53
ITIH3-201ENST00000416872 LOC105371045A0A1W2PR82 267 aa18.27■□□□□ 0.52
ITIH3-201ENST00000416872 BAZ1AQ9NRL2 1556 aaPredicted RBP18.24■□□□□ 0.51
ITIH3-201ENST00000416872 TRIM26Q12899 539 aaPredicted RBP18.18■□□□□ 0.5
ITIH3-201ENST00000416872 TRIM41Q8WV44 630 aa18.15■□□□□ 0.5
ITIH3-201ENST00000416872 SMARCA4P51532 1647 aa18.13■□□□□ 0.49
ITIH3-201ENST00000416872 EIF4G1Q04637 1599 aaKnown RBP18.11■□□□□ 0.49
ITIH3-201ENST00000416872 TOP2AP11388 1531 aaKnown RBP18.05■□□□□ 0.48
ITIH3-201ENST00000416872 FAM9AQ8IZU1 332 aaPredicted RBP18■□□□□ 0.47
ITIH3-201ENST00000416872 ZEB1P37275 1124 aaPredicted RBP17.96■□□□□ 0.47
ITIH3-201ENST00000416872 SMARCA2P51531 1590 aa17.94■□□□□ 0.46
ITIH3-201ENST00000416872 CC2D2AQ9P2K1 1620 aa17.92■□□□□ 0.46
ITIH3-201ENST00000416872 ATAD2BQ9ULI0 1458 aa17.91■□□□□ 0.46
ITIH3-201ENST00000416872 CCDC88BA6NC98 1476 aa17.91■□□□□ 0.46
ITIH3-201ENST00000416872 PEG3Q9GZU2 1588 aa17.89■□□□□ 0.45
ITIH3-201ENST00000416872 EHMT2Q96KQ7 1210 aa17.86■□□□□ 0.45
ITIH3-201ENST00000416872 ABCC8Q09428 1581 aa17.84■□□□□ 0.45
ITIH3-201ENST00000416872 BAZ1BQ9UIG0 1483 aaKnown RBP17.83■□□□□ 0.44
ITIH3-201ENST00000416872 NCAPD3P42695 1498 aa17.8■□□□□ 0.44
ITIH3-201ENST00000416872 DNAJC5BQ9UF47 199 aa17.76■□□□□ 0.43
ITIH3-201ENST00000416872 HMGXB3Q12766 1538 aa17.75■□□□□ 0.43
ITIH3-201ENST00000416872 PELP1Q8IZL8 1130 aaKnown RBP17.73■□□□□ 0.43
ITIH3-201ENST00000416872 SCAF1Q9H7N4 1312 aaKnown RBP17.62■□□□□ 0.41
ITIH3-201ENST00000416872 SOGA1O94964 1423 aa17.57■□□□□ 0.4
ITIH3-201ENST00000416872 WRNQ14191 1432 aaPredicted RBP eCLIP17.52■□□□□ 0.4
ITIH3-201ENST00000416872 SYNJ1O43426 1573 aa17.5■□□□□ 0.39
ITIH3-201ENST00000416872 RUSC2Q8N2Y8 1516 aa17.5■□□□□ 0.39
ITIH3-201ENST00000416872 EEA1Q15075 1411 aa17.47■□□□□ 0.39
ITIH3-201ENST00000416872 CEP162Q5TB80 1403 aa17.42■□□□□ 0.38
ITIH3-201ENST00000416872 CSRNP3Q8WYN3 585 aa17.4■□□□□ 0.38
ITIH3-201ENST00000416872 TNIKQ9UKE5 1360 aa17.37■□□□□ 0.37
ITIH3-201ENST00000416872 GOLGA3Q08378 1498 aa17.37■□□□□ 0.37
ITIH3-201ENST00000416872 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.35■□□□□ 0.37
ITIH3-201ENST00000416872 CADPSQ9ULU8 1353 aa17.34■□□□□ 0.37
ITIH3-201ENST00000416872 ACIN1Q9UKV3 1341 aaKnown RBP17.34■□□□□ 0.37
ITIH3-201ENST00000416872 CCER1Q8TC90 406 aaPredicted RBP17.33■□□□□ 0.37
ITIH3-201ENST00000416872 CFTRP13569 1480 aa17.33■□□□□ 0.36
ITIH3-201ENST00000416872 UBTFP17480 764 aaKnown RBP17.32■□□□□ 0.36
ITIH3-201ENST00000416872 NESP48681 1621 aa17.31■□□□□ 0.36
ITIH3-201ENST00000416872 KIF21BO75037 1637 aa17.3■□□□□ 0.36
ITIH3-201ENST00000416872 TOP2BQ02880 1626 aa17.3■□□□□ 0.36
ITIH3-201ENST00000416872 CEP164Q9UPV0 1460 aa17.28■□□□□ 0.36
ITIH3-201ENST00000416872 BIVM-ERCC5R4GMW8 1640 aa17.27■□□□□ 0.36
ITIH3-201ENST00000416872 NEUROD1Q13562 356 aa17.26■□□□□ 0.35
ITIH3-201ENST00000416872 LAMC3Q9Y6N6 1575 aa17.26■□□□□ 0.35
ITIH3-201ENST00000416872 TTBK1Q5TCY1 1321 aaPredicted RBP17.24■□□□□ 0.35
ITIH3-201ENST00000416872 DIEXFQ68CQ4 756 aaKnown RBP17.21■□□□□ 0.35
ITIH3-201ENST00000416872 PRDM2Q13029 1718 aa17.2■□□□□ 0.34
ITIH3-201ENST00000416872 RAPGEF2Q9Y4G8 1499 aa17.17■□□□□ 0.34
ITIH3-201ENST00000416872 CUX1P39880 1505 aa17.17■□□□□ 0.34
ITIH3-201ENST00000416872 FANCD2Q9BXW9 1451 aa17.16■□□□□ 0.34
ITIH3-201ENST00000416872 CENPBP07199 599 aaPredicted RBP17.16■□□□□ 0.34
ITIH3-201ENST00000416872 PDS5BQ9NTI5 1447 aa17.16■□□□□ 0.34
ITIH3-201ENST00000416872 MYT1Q01538 1121 aa17.15■□□□□ 0.34
ITIH3-201ENST00000416872 CLIP1P30622 1438 aa17.13■□□□□ 0.33
ITIH3-201ENST00000416872 GTF3C3Q9Y5Q9 886 aa17.13■□□□□ 0.33
ITIH3-201ENST00000416872 KIF21AQ7Z4S6 1674 aa17.09■□□□□ 0.33
ITIH3-201ENST00000416872 ERCC6Q03468 1493 aa17.08■□□□□ 0.32
ITIH3-201ENST00000416872 RANGAP1P46060 587 aaPredicted RBP17.05■□□□□ 0.32
ITIH3-201ENST00000416872 ERICH3Q5RHP9 1530 aa17.04■□□□□ 0.32
ITIH3-201ENST00000416872 VPS8Q8N3P4 1428 aa17.04■□□□□ 0.32
ITIH3-201ENST00000416872 PRXQ9BXM0 1461 aa17.02■□□□□ 0.32
ITIH3-201ENST00000416872 ZNF316A6NFI3 1004 aaPredicted RBP17■□□□□ 0.31
ITIH3-201ENST00000416872 KIF27Q86VH2 1401 aa17■□□□□ 0.31
ITIH3-201ENST00000416872 SLC24A1O60721 1099 aa16.99■□□□□ 0.31
ITIH3-201ENST00000416872 URB2Q14146 1524 aaKnown RBP16.95■□□□□ 0.3
ITIH3-201ENST00000416872 MRC2Q9UBG0 1479 aa16.95■□□□□ 0.3
ITIH3-201ENST00000416872 DNMBPQ6XZF7 1577 aa16.93■□□□□ 0.3
ITIH3-201ENST00000416872 TOPBP1Q92547 1522 aa16.93■□□□□ 0.3
ITIH3-201ENST00000416872 ARAP1Q96P48 1450 aa16.91■□□□□ 0.3
ITIH3-201ENST00000416872 CUX2O14529 1486 aa16.9■□□□□ 0.3
ITIH3-201ENST00000416872 APLP2Q06481 763 aa16.9■□□□□ 0.3
ITIH3-201ENST00000416872 FGD5Q6ZNL6 1462 aa16.89■□□□□ 0.29
ITIH3-201ENST00000416872 THOC2Q8NI27 1593 aaKnown RBP16.87■□□□□ 0.29
ITIH3-201ENST00000416872 WDR62O43379 1518 aa16.85■□□□□ 0.29
ITIH3-201ENST00000416872 POLA1P09884 1462 aaPredicted RBP16.83■□□□□ 0.29
ITIH3-201ENST00000416872 HNRNPUL2Q1KMD3 747 aaKnown RBP16.82■□□□□ 0.28
ITIH3-201ENST00000416872 MIER1Q8N108 512 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms