RNA–Protein interactions for RNA: ENST00000423035.5

PGAP1-206, Transcript of post-GPI attachment to proteins 1, humanhuman

TSL 1 (best)

Gene PGAP1, Length 8,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP1-206ENST00000423035 MYT1Q01538 1121 aa7.8□□□□□ -1.16
PGAP1-206ENST00000423035 NISCHQ9Y2I1 1504 aa7.72□□□□□ -1.17
PGAP1-206ENST00000423035 EHMT2Q96KQ7 1210 aa7.68□□□□□ -1.18
PGAP1-206ENST00000423035 RANGAP1P46060 587 aaPredicted RBP7.6□□□□□ -1.19
PGAP1-206ENST00000423035 SLC24A1O60721 1099 aa7.56□□□□□ -1.2
PGAP1-206ENST00000423035 PELP1Q8IZL8 1130 aaKnown RBP7.43□□□□□ -1.22
PGAP1-206ENST00000423035 TTBK1Q5TCY1 1321 aaPredicted RBP7.43□□□□□ -1.22
PGAP1-206ENST00000423035 ERICH6Q7L0X2 663 aa7.39□□□□□ -1.23
PGAP1-206ENST00000423035 DCAF8L2P0C7V8 631 aa7.33□□□□□ -1.24
PGAP1-206ENST00000423035 ABCC9O60706 1549 aa7.17□□□□□ -1.26
PGAP1-206ENST00000423035 MYT1LQ9UL68 1186 aa7.07□□□□□ -1.28
PGAP1-206ENST00000423035 CHIC1Q5VXU3 224 aa7.04□□□□□ -1.28
PGAP1-206ENST00000423035 DNAJC5BQ9UF47 199 aa7.01□□□□□ -1.29
PGAP1-206ENST00000423035 YTHDC1Q96MU7 727 aaKnown RBP6.92□□□□□ -1.3
PGAP1-206ENST00000423035 POLR3GLQ9BT43 218 aa6.91□□□□□ -1.3
PGAP1-206ENST00000423035 AMER1Q5JTC6 1135 aaPredicted RBP6.9□□□□□ -1.3
PGAP1-206ENST00000423035 HAP1P54257 671 aaPredicted RBP6.85□□□□□ -1.31
PGAP1-206ENST00000423035 DAXXQ9UER7 740 aaPredicted RBP6.79□□□□□ -1.32
PGAP1-206ENST00000423035 CCDC180Q9P1Z9 1646 aa6.73□□□□□ -1.33
PGAP1-206ENST00000423035 EIF5BO60841 1220 aaKnown RBP6.73□□□□□ -1.33
PGAP1-206ENST00000423035 FAM9AQ8IZU1 332 aaPredicted RBP6.72□□□□□ -1.33
PGAP1-206ENST00000423035 PABPN1Q86U42 306 aaKnown RBP eCLIP6.72□□□□□ -1.33
PGAP1-206ENST00000423035 HOMEZQ8IX15 550 aa6.7□□□□□ -1.34
PGAP1-206ENST00000423035 RTN4Q9NQC3 1192 aaKnown RBP6.69□□□□□ -1.34
PGAP1-206ENST00000423035 C14orf37Q86TY3 774 aa6.68□□□□□ -1.34
PGAP1-206ENST00000423035 CCER1Q8TC90 406 aaPredicted RBP6.67□□□□□ -1.34
PGAP1-206ENST00000423035 BCANQ96GW7 911 aa6.65□□□□□ -1.34
PGAP1-206ENST00000423035 GLIPR1L2Q4G1C9 344 aa6.64□□□□□ -1.35
PGAP1-206ENST00000423035 ATP1B4Q9UN42 357 aaPredicted RBP6.62□□□□□ -1.35
PGAP1-206ENST00000423035 PODXL2Q9NZ53 605 aa6.62□□□□□ -1.35
PGAP1-206ENST00000423035 RB1CC1Q8TDY2 1594 aa6.6□□□□□ -1.35
PGAP1-206ENST00000423035 TPRNQ4KMQ1 711 aa6.6□□□□□ -1.35
PGAP1-206ENST00000423035 SLC4A1APQ9BWU0 796 aaKnown RBP6.59□□□□□ -1.35
PGAP1-206ENST00000423035 CDK11BP21127 795 aaKnown RBP6.59□□□□□ -1.35
PGAP1-206ENST00000423035 CDK11AQ9UQ88 783 aaPredicted RBP6.59□□□□□ -1.35
PGAP1-206ENST00000423035 TULP1O00294 542 aaPredicted RBP6.59□□□□□ -1.36
PGAP1-206ENST00000423035 NBR1Q14596 966 aa6.58□□□□□ -1.36
PGAP1-206ENST00000423035 HMGB1P09429 215 aaKnown RBP6.55□□□□□ -1.36
PGAP1-206ENST00000423035 NCBP3Q53F19 620 aaKnown RBP6.54□□□□□ -1.36
PGAP1-206ENST00000423035 NACADO15069 1562 aa6.53□□□□□ -1.36
PGAP1-206ENST00000423035 PRKCSHP14314 528 aaPredicted RBP6.52□□□□□ -1.37
PGAP1-206ENST00000423035 RTL5Q5HYW3 569 aaPredicted RBP6.52□□□□□ -1.37
PGAP1-206ENST00000423035 NEFLP07196 543 aa6.52□□□□□ -1.37
PGAP1-206ENST00000423035 PLPPR3Q6T4P5 718 aa6.52□□□□□ -1.37
PGAP1-206ENST00000423035 ARID3AQ99856 593 aa6.5□□□□□ -1.37
PGAP1-206ENST00000423035 BICRAQ9NZM4 1560 aa6.5□□□□□ -1.37
PGAP1-206ENST00000423035 MYO15BQ96JP2 1530 aa6.5□□□□□ -1.37
PGAP1-206ENST00000423035 ARXQ96QS3 562 aa6.49□□□□□ -1.37
PGAP1-206ENST00000423035 NPM2Q86SE8 214 aaKnown RBP6.48□□□□□ -1.37
PGAP1-206ENST00000423035 CECR2Q9BXF3 1484 aa6.48□□□□□ -1.37
PGAP1-206ENST00000423035 DNAJC5Q9H3Z4 198 aa6.46□□□□□ -1.37
PGAP1-206ENST00000423035 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.43□□□□□ -1.38
PGAP1-206ENST00000423035 SHROOM4Q9ULL8 1493 aa6.41□□□□□ -1.38
PGAP1-206ENST00000423035 CENPBP07199 599 aaPredicted RBP6.4□□□□□ -1.39
PGAP1-206ENST00000423035 ZNF326Q5BKZ1 582 aaKnown RBP6.4□□□□□ -1.39
PGAP1-206ENST00000423035 ZCCHC6Q5VYS8 1495 aaKnown RBP6.4□□□□□ -1.39
PGAP1-206ENST00000423035 ARID4BQ4LE39 1312 aaPredicted RBP6.39□□□□□ -1.39
PGAP1-206ENST00000423035 SUPT5HO00267 1087 aaKnown RBP6.39□□□□□ -1.39
PGAP1-206ENST00000423035 CFAP44Q96MT7 982 aa6.38□□□□□ -1.39
PGAP1-206ENST00000423035 PTMSP20962 102 aa6.38□□□□□ -1.39
PGAP1-206ENST00000423035 ZBTB7CA1YPR0 619 aa6.36□□□□□ -1.39
PGAP1-206ENST00000423035 KCNA4P22459 653 aa6.35□□□□□ -1.39
PGAP1-206ENST00000423035 DCAF1Q9Y4B6 1507 aa6.35□□□□□ -1.39
PGAP1-206ENST00000423035 TAOK2Q9UL54 1235 aa6.34□□□□□ -1.39
PGAP1-206ENST00000423035 GTF3C3Q9Y5Q9 886 aa6.34□□□□□ -1.4
PGAP1-206ENST00000423035 EIF4G1Q04637 1599 aaKnown RBP6.33□□□□□ -1.4
PGAP1-206ENST00000423035 FKBP8Q14318 412 aa6.33□□□□□ -1.4
PGAP1-206ENST00000423035 SCRIBQ14160 1630 aa6.33□□□□□ -1.4
PGAP1-206ENST00000423035 CC2D2AQ9P2K1 1620 aa6.32□□□□□ -1.4
PGAP1-206ENST00000423035 KAT6BQ8WYB5 2073 aa6.31□□□□□ -1.4
PGAP1-206ENST00000423035 CLSPNQ9HAW4 1339 aa6.27□□□□□ -1.41
PGAP1-206ENST00000423035 ZEB1P37275 1124 aaPredicted RBP6.27□□□□□ -1.41
PGAP1-206ENST00000423035 AEBP2Q6ZN18 517 aaPredicted RBP6.25□□□□□ -1.41
PGAP1-206ENST00000423035 ZNF526Q8TF50 670 aaPredicted RBP6.24□□□□□ -1.41
PGAP1-206ENST00000423035 LAS1LQ9Y4W2 734 aaKnown RBP6.24□□□□□ -1.41
PGAP1-206ENST00000423035 CCDC9Q9Y3X0 531 aaKnown RBP6.23□□□□□ -1.41
PGAP1-206ENST00000423035 USP35Q9P2H5 1018 aa6.23□□□□□ -1.41
PGAP1-206ENST00000423035 A0A0U1RQG5 324 aaPredicted RBP6.21□□□□□ -1.41
PGAP1-206ENST00000423035 NCAPD3P42695 1498 aa6.21□□□□□ -1.42
PGAP1-206ENST00000423035 TIMELESSQ9UNS1 1208 aa6.21□□□□□ -1.42
PGAP1-206ENST00000423035 KLHL34Q8N239 644 aa6.19□□□□□ -1.42
PGAP1-206ENST00000423035 CNGB1Q14028 1251 aaPredicted RBP6.17□□□□□ -1.42
PGAP1-206ENST00000423035 NCLP19338 710 aaKnown RBP6.17□□□□□ -1.42
PGAP1-206ENST00000423035 PAXIP1Q6ZW49 1069 aaPredicted RBP6.17□□□□□ -1.42
PGAP1-206ENST00000423035 CSRNP3Q8WYN3 585 aa6.16□□□□□ -1.42
PGAP1-206ENST00000423035 CUX2O14529 1486 aa6.16□□□□□ -1.42
PGAP1-206ENST00000423035 ATAD2BQ9ULI0 1458 aa6.15□□□□□ -1.43
PGAP1-206ENST00000423035 PLCB2Q00722 1185 aa6.14□□□□□ -1.43
PGAP1-206ENST00000423035 FBXO3Q9UK99 471 aa6.14□□□□□ -1.43
PGAP1-206ENST00000423035 NESP48681 1621 aa6.14□□□□□ -1.43
PGAP1-206ENST00000423035 PPM1GO15355 546 aaPredicted RBP6.13□□□□□ -1.43
PGAP1-206ENST00000423035 HSP90B1P14625 803 aaKnown RBP6.13□□□□□ -1.43
PGAP1-206ENST00000423035 ERCC6Q03468 1493 aa6.12□□□□□ -1.43
PGAP1-206ENST00000423035 CALRP27797 417 aaKnown RBP6.12□□□□□ -1.43
PGAP1-206ENST00000423035 PDIA4P13667 645 aaKnown RBP6.11□□□□□ -1.43
PGAP1-206ENST00000423035 TNNT2P45379 298 aaPredicted RBP6.11□□□□□ -1.43
PGAP1-206ENST00000423035 UNC13AQ9UPW8 1703 aa6.11□□□□□ -1.43
PGAP1-206ENST00000423035 PPP1R1BQ9UD71 204 aaPredicted RBP6.1□□□□□ -1.43
PGAP1-206ENST00000423035 ANP32EQ9BTT0 268 aa6.09□□□□□ -1.43
PGAP1-206ENST00000423035 NAP1L5Q96NT1 182 aaPredicted RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms