RNA–Protein interactions for RNA: ENST00000640495.1

GOSR2-238, Transcript of golgi SNAP receptor complex member 2, human

TSL 5 BASIC

Gene GOSR2, Length 3,395 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GOSR2-238	ENST00000640495	NISCH	Q9Y2I1	1504 aa		16.56	■□□□□ 0.24
GOSR2-238	ENST00000640495	CCDC180	Q9P1Z9	1646 aa		14.24	□□□□□ -0.13
GOSR2-238	ENST00000640495	ZCCHC6	Q5VYS8	1495 aa	Known RBP	14.15	□□□□□ -0.14
GOSR2-238	ENST00000640495	AEBP2	Q6ZN18	517 aa	Predicted RBP	14	□□□□□ -0.17
GOSR2-238	ENST00000640495	PELP1	Q8IZL8	1130 aa	Known RBP	13.99	□□□□□ -0.17
GOSR2-238	ENST00000640495	CHIC1	Q5VXU3	224 aa		13.88	□□□□□ -0.19
GOSR2-238	ENST00000640495	DCAF1	Q9Y4B6	1507 aa		13.85	□□□□□ -0.19
GOSR2-238	ENST00000640495	MYO15B	Q96JP2	1530 aa		13.73	□□□□□ -0.21
GOSR2-238	ENST00000640495	MYT1	Q01538	1121 aa		13.67	□□□□□ -0.22
GOSR2-238	ENST00000640495	SHROOM4	Q9ULL8	1493 aa		13.65	□□□□□ -0.22
GOSR2-238	ENST00000640495	HRC	P23327	699 aa		13.54	□□□□□ -0.24
GOSR2-238	ENST00000640495	ABCC9	O60706	1549 aa		13.44	□□□□□ -0.26
GOSR2-238	ENST00000640495	SUPT5H	O00267	1087 aa	Known RBP	13.42	□□□□□ -0.26
GOSR2-238	ENST00000640495	RB1CC1	Q8TDY2	1594 aa		13.13	□□□□□ -0.31
GOSR2-238	ENST00000640495	RSF1	Q96T23	1441 aa	Predicted RBP	13.1	□□□□□ -0.31
GOSR2-238	ENST00000640495	PPARGC1B	Q86YN6	1023 aa	Known RBP	13.1	□□□□□ -0.31
GOSR2-238	ENST00000640495	PCGF6	Q9BYE7	350 aa		13.07	□□□□□ -0.32
GOSR2-238	ENST00000640495	EIF4G1	Q04637	1599 aa	Known RBP	13.07	□□□□□ -0.32
GOSR2-238	ENST00000640495	SCAF1	Q9H7N4	1312 aa	Known RBP	13.05	□□□□□ -0.32
GOSR2-238	ENST00000640495	TTBK1	Q5TCY1	1321 aa	Predicted RBP	13.03	□□□□□ -0.32
GOSR2-238	ENST00000640495	TRIM26	Q12899	539 aa	Predicted RBP	13	□□□□□ -0.33
GOSR2-238	ENST00000640495	SCRIB	Q14160	1630 aa		12.96	□□□□□ -0.33
GOSR2-238	ENST00000640495	LOC105371045	A0A1W2PR82	267 aa		12.92	□□□□□ -0.34
GOSR2-238	ENST00000640495	NACAD	O15069	1562 aa		12.92	□□□□□ -0.34
GOSR2-238	ENST00000640495	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	12.88	□□□□□ -0.35
GOSR2-238	ENST00000640495	PRKCSH	P14314	528 aa	Predicted RBP	12.87	□□□□□ -0.35
GOSR2-238	ENST00000640495	ZEB1	P37275	1124 aa	Predicted RBP	12.84	□□□□□ -0.35
GOSR2-238	ENST00000640495	MROH2B	Q7Z745	1585 aa		12.81	□□□□□ -0.36
GOSR2-238	ENST00000640495	WIZ	O95785	1651 aa		12.79	□□□□□ -0.36
GOSR2-238	ENST00000640495	BCL11A	Q9H165	835 aa		12.76	□□□□□ -0.37
GOSR2-238	ENST00000640495	CECR2	Q9BXF3	1484 aa		12.74	□□□□□ -0.37
GOSR2-238	ENST00000640495	DCAF8L2	P0C7V8	631 aa		12.72	□□□□□ -0.37
GOSR2-238	ENST00000640495	WRN	Q14191	1432 aa	Predicted RBP eCLIP	12.71	□□□□□ -0.37
GOSR2-238	ENST00000640495	TOP2A	P11388	1531 aa	Known RBP	12.67	□□□□□ -0.38
GOSR2-238	ENST00000640495	UNC13A	Q9UPW8	1703 aa		12.65	□□□□□ -0.38
GOSR2-238	ENST00000640495	FAM9A	Q8IZU1	332 aa	Predicted RBP	12.63	□□□□□ -0.39
GOSR2-238	ENST00000640495	TRIM41	Q8WV44	630 aa		12.62	□□□□□ -0.39
GOSR2-238	ENST00000640495	SMARCA2	P51531	1590 aa		12.61	□□□□□ -0.39
GOSR2-238	ENST00000640495	SMARCA4	P51532	1647 aa		12.61	□□□□□ -0.39
GOSR2-238	ENST00000640495	PHF23	Q9BUL5	403 aa	Predicted RBP	12.56	□□□□□ -0.4
GOSR2-238	ENST00000640495	PEG3	Q9GZU2	1588 aa		12.56	□□□□□ -0.4
GOSR2-238	ENST00000640495	ERICH6	Q7L0X2	663 aa		12.52	□□□□□ -0.41
GOSR2-238	ENST00000640495	CENPB	P07199	599 aa	Predicted RBP	12.5	□□□□□ -0.41
GOSR2-238	ENST00000640495	EEA1	Q15075	1411 aa		12.49	□□□□□ -0.41
GOSR2-238	ENST00000640495	ACIN1	Q9UKV3	1341 aa	Known RBP	12.49	□□□□□ -0.41
GOSR2-238	ENST00000640495	GTF3C3	Q9Y5Q9	886 aa		12.48	□□□□□ -0.41
GOSR2-238	ENST00000640495	CCDC88B	A6NC98	1476 aa		12.48	□□□□□ -0.41
GOSR2-238	ENST00000640495	KIF21B	O75037	1637 aa		12.46	□□□□□ -0.42
GOSR2-238	ENST00000640495	TNIK	Q9UKE5	1360 aa		12.45	□□□□□ -0.42
GOSR2-238	ENST00000640495	ABCC8	Q09428	1581 aa		12.45	□□□□□ -0.42
GOSR2-238	ENST00000640495	NEUROD1	Q13562	356 aa		12.44	□□□□□ -0.42
GOSR2-238	ENST00000640495	CEP162	Q5TB80	1403 aa		12.41	□□□□□ -0.42
GOSR2-238	ENST00000640495	APLP2	Q06481	763 aa		12.39	□□□□□ -0.43
GOSR2-238	ENST00000640495	BICRA	Q9NZM4	1560 aa		12.37	□□□□□ -0.43
GOSR2-238	ENST00000640495	SOGA1	O94964	1423 aa		12.33	□□□□□ -0.44
GOSR2-238	ENST00000640495	GOLGA3	Q08378	1498 aa		12.32	□□□□□ -0.44
GOSR2-238	ENST00000640495	BAZ1B	Q9UIG0	1483 aa	Known RBP	12.31	□□□□□ -0.44
GOSR2-238	ENST00000640495	SYNJ1	O43426	1573 aa		12.31	□□□□□ -0.44
GOSR2-238	ENST00000640495	RUSC2	Q8N2Y8	1516 aa		12.29	□□□□□ -0.44
GOSR2-238	ENST00000640495	BIVM-ERCC5	R4GMW8	1640 aa		12.28	□□□□□ -0.44
GOSR2-238	ENST00000640495	CEP164	Q9UPV0	1460 aa		12.24	□□□□□ -0.45
GOSR2-238	ENST00000640495	TOP2B	Q02880	1626 aa		12.22	□□□□□ -0.45
GOSR2-238	ENST00000640495	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	12.22	□□□□□ -0.45
GOSR2-238	ENST00000640495	ANP32E	Q9BTT0	268 aa		12.21	□□□□□ -0.45
GOSR2-238	ENST00000640495	ERICH3	Q5RHP9	1530 aa		12.19	□□□□□ -0.46
GOSR2-238	ENST00000640495	DIEXF	Q68CQ4	756 aa	Known RBP	12.19	□□□□□ -0.46
GOSR2-238	ENST00000640495	VPS8	Q8N3P4	1428 aa		12.18	□□□□□ -0.46
GOSR2-238	ENST00000640495	CUX2	O14529	1486 aa		12.17	□□□□□ -0.46
GOSR2-238	ENST00000640495	CCER1	Q8TC90	406 aa	Predicted RBP	12.16	□□□□□ -0.46
GOSR2-238	ENST00000640495	CSRNP3	Q8WYN3	585 aa		12.16	□□□□□ -0.46
GOSR2-238	ENST00000640495	CLIP1	P30622	1438 aa		12.13	□□□□□ -0.47
GOSR2-238	ENST00000640495	ZNF316	A6NFI3	1004 aa	Predicted RBP	12.12	□□□□□ -0.47
GOSR2-238	ENST00000640495	PRDM2	Q13029	1718 aa		12.11	□□□□□ -0.47
GOSR2-238	ENST00000640495	ATAD2B	Q9ULI0	1458 aa		12.11	□□□□□ -0.47
GOSR2-238	ENST00000640495	PRX	Q9BXM0	1461 aa		12.09	□□□□□ -0.47
GOSR2-238	ENST00000640495	CLSPN	Q9HAW4	1339 aa		12.08	□□□□□ -0.48
GOSR2-238	ENST00000640495	RAPGEF2	Q9Y4G8	1499 aa		12.07	□□□□□ -0.48
GOSR2-238	ENST00000640495	ARAP1	Q96P48	1450 aa		12.06	□□□□□ -0.48
GOSR2-238	ENST00000640495	RRBP1	Q9P2E9	1410 aa	Known RBP	12.04	□□□□□ -0.48
GOSR2-238	ENST00000640495	HMGXB3	Q12766	1538 aa		12.03	□□□□□ -0.48
GOSR2-238	ENST00000640495	SLC24A1	O60721	1099 aa		12.02	□□□□□ -0.49
GOSR2-238	ENST00000640495	MAP3K1	Q13233	1512 aa		12.01	□□□□□ -0.49
GOSR2-238	ENST00000640495	DHX57	Q6P158	1386 aa	Known RBP	11.98	□□□□□ -0.49
GOSR2-238	ENST00000640495	EHMT2	Q96KQ7	1210 aa		11.96	□□□□□ -0.49
GOSR2-238	ENST00000640495	CUX1	P39880	1505 aa		11.94	□□□□□ -0.5
GOSR2-238	ENST00000640495	CFAP43	Q8NDM7	1665 aa		11.93	□□□□□ -0.5
GOSR2-238	ENST00000640495	MIER1	Q8N108	512 aa		11.92	□□□□□ -0.5
GOSR2-238	ENST00000640495	ANO8	Q9HCE9	1232 aa	Predicted RBP	11.91	□□□□□ -0.5
GOSR2-238	ENST00000640495	MAPKBP1	O60336	1514 aa		11.9	□□□□□ -0.5
GOSR2-238	ENST00000640495	YTHDC1	Q96MU7	727 aa	Known RBP	11.9	□□□□□ -0.51
GOSR2-238	ENST00000640495	NCAPD3	P42695	1498 aa		11.89	□□□□□ -0.51
GOSR2-238	ENST00000640495	ARHGAP35	Q9NRY4	1499 aa		11.87	□□□□□ -0.51
GOSR2-238	ENST00000640495	TIAM1	Q13009	1591 aa		11.86	□□□□□ -0.51
GOSR2-238	ENST00000640495	UBTF	P17480	764 aa	Known RBP	11.86	□□□□□ -0.51
GOSR2-238	ENST00000640495	CFTR	P13569	1480 aa		11.86	□□□□□ -0.51
GOSR2-238	ENST00000640495	EIF5B	O60841	1220 aa	Known RBP	11.8	□□□□□ -0.52
GOSR2-238	ENST00000640495	TSHZ2	Q9NRE2	1034 aa		11.8	□□□□□ -0.52
GOSR2-238	ENST00000640495	KIF27	Q86VH2	1401 aa		11.77	□□□□□ -0.53
GOSR2-238	ENST00000640495	CCNB3	Q8WWL7	1395 aa		11.75	□□□□□ -0.53
GOSR2-238	ENST00000640495	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	11.75	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms