Protein–RNA interactions for Protein: Q9H3M0

KCNF1, Potassium voltage-gated channel subfamily F member 1, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNF1Q9H3M0 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
KCNF1Q9H3M0 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
KCNF1Q9H3M0 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
KCNF1Q9H3M0 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
KCNF1Q9H3M0 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC26.32■■□□□ 1.8
KCNF1Q9H3M0 CALM3-209ENST00000597743 577 ntTSL 4 BASIC26.32■■□□□ 1.8
KCNF1Q9H3M0 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
KCNF1Q9H3M0 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC26.32■■□□□ 1.8
KCNF1Q9H3M0 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
KCNF1Q9H3M0 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
KCNF1Q9H3M0 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
KCNF1Q9H3M0 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
KCNF1Q9H3M0 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
KCNF1Q9H3M0 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
KCNF1Q9H3M0 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
KCNF1Q9H3M0 AP003733.4-201ENST00000623785 1697 ntBASIC26.31■■□□□ 1.8
KCNF1Q9H3M0 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC26.3■■□□□ 1.8
KCNF1Q9H3M0 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
KCNF1Q9H3M0 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC26.3■■□□□ 1.8
KCNF1Q9H3M0 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC26.3■■□□□ 1.8
KCNF1Q9H3M0 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC26.3■■□□□ 1.8
KCNF1Q9H3M0 ME2-208ENST00000638937 2471 ntTSL 5 BASIC26.3■■□□□ 1.8
KCNF1Q9H3M0 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
KCNF1Q9H3M0 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
KCNF1Q9H3M0 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
KCNF1Q9H3M0 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
KCNF1Q9H3M0 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
KCNF1Q9H3M0 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
KCNF1Q9H3M0 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
KCNF1Q9H3M0 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
KCNF1Q9H3M0 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC26.29■■□□□ 1.8
KCNF1Q9H3M0 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
KCNF1Q9H3M0 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC26.29■■□□□ 1.8
KCNF1Q9H3M0 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC26.28■■□□□ 1.8
KCNF1Q9H3M0 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
KCNF1Q9H3M0 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
KCNF1Q9H3M0 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
KCNF1Q9H3M0 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
KCNF1Q9H3M0 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
KCNF1Q9H3M0 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC26.28■■□□□ 1.8
KCNF1Q9H3M0 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
KCNF1Q9H3M0 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
KCNF1Q9H3M0 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
KCNF1Q9H3M0 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC26.27■■□□□ 1.8
KCNF1Q9H3M0 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
KCNF1Q9H3M0 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC26.27■■□□□ 1.8
KCNF1Q9H3M0 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
KCNF1Q9H3M0 DUSP8P5-201ENST00000422884 1815 ntBASIC26.27■■□□□ 1.8
KCNF1Q9H3M0 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
KCNF1Q9H3M0 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
KCNF1Q9H3M0 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
KCNF1Q9H3M0 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
KCNF1Q9H3M0 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
KCNF1Q9H3M0 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
KCNF1Q9H3M0 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
KCNF1Q9H3M0 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
KCNF1Q9H3M0 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
KCNF1Q9H3M0 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
KCNF1Q9H3M0 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
KCNF1Q9H3M0 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
KCNF1Q9H3M0 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
KCNF1Q9H3M0 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
KCNF1Q9H3M0 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
KCNF1Q9H3M0 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
KCNF1Q9H3M0 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
KCNF1Q9H3M0 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
KCNF1Q9H3M0 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
KCNF1Q9H3M0 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
KCNF1Q9H3M0 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
KCNF1Q9H3M0 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
KCNF1Q9H3M0 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
KCNF1Q9H3M0 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
KCNF1Q9H3M0 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC26.23■■□□□ 1.79
KCNF1Q9H3M0 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
KCNF1Q9H3M0 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC26.23■■□□□ 1.79
KCNF1Q9H3M0 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC26.23■■□□□ 1.79
KCNF1Q9H3M0 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
KCNF1Q9H3M0 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
KCNF1Q9H3M0 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
KCNF1Q9H3M0 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC26.22■■□□□ 1.79
KCNF1Q9H3M0 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
KCNF1Q9H3M0 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC26.22■■□□□ 1.79
KCNF1Q9H3M0 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
KCNF1Q9H3M0 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
KCNF1Q9H3M0 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
KCNF1Q9H3M0 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
KCNF1Q9H3M0 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC26.21■■□□□ 1.79
KCNF1Q9H3M0 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC26.21■■□□□ 1.79
KCNF1Q9H3M0 AC005559.1-201ENST00000589661 871 ntBASIC26.21■■□□□ 1.79
KCNF1Q9H3M0 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
KCNF1Q9H3M0 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
KCNF1Q9H3M0 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
KCNF1Q9H3M0 AC097358.2-201ENST00000607541 1159 ntBASIC26.2■■□□□ 1.78
KCNF1Q9H3M0 C9orf163-202ENST00000624034 2573 ntBASIC26.2■■□□□ 1.78
KCNF1Q9H3M0 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC26.19■■□□□ 1.78
KCNF1Q9H3M0 SLC6A10P-202ENST00000431994 2058 ntBASIC26.19■■□□□ 1.78
KCNF1Q9H3M0 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
KCNF1Q9H3M0 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
KCNF1Q9H3M0 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
KCNF1Q9H3M0 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms