Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NKX6-2Q9C056 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NKX6-2Q9C056 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
NKX6-2Q9C056 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
NKX6-2Q9C056 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NKX6-2Q9C056 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NKX6-2Q9C056 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
NKX6-2Q9C056 LINC00565-201ENST00000562710 2331 ntBASIC19.33■□□□□ 0.68
NKX6-2Q9C056 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NKX6-2Q9C056 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC19.32■□□□□ 0.68
NKX6-2Q9C056 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NKX6-2Q9C056 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NKX6-2Q9C056 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
NKX6-2Q9C056 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NKX6-2Q9C056 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NKX6-2Q9C056 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
NKX6-2Q9C056 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NKX6-2Q9C056 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NKX6-2Q9C056 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
NKX6-2Q9C056 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
NKX6-2Q9C056 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NKX6-2Q9C056 AC018358.1-201ENST00000631079 1402 ntBASIC19.31■□□□□ 0.68
NKX6-2Q9C056 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NKX6-2Q9C056 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NKX6-2Q9C056 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NKX6-2Q9C056 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
NKX6-2Q9C056 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC19.31■□□□□ 0.68
NKX6-2Q9C056 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NKX6-2Q9C056 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
NKX6-2Q9C056 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.3■□□□□ 0.68
NKX6-2Q9C056 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NKX6-2Q9C056 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NKX6-2Q9C056 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NKX6-2Q9C056 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
NKX6-2Q9C056 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
NKX6-2Q9C056 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NKX6-2Q9C056 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.3■□□□□ 0.68
NKX6-2Q9C056 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NKX6-2Q9C056 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
NKX6-2Q9C056 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NKX6-2Q9C056 WHAMMP3-201ENST00000611636 1609 ntBASIC19.29■□□□□ 0.68
NKX6-2Q9C056 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NKX6-2Q9C056 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NKX6-2Q9C056 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.29■□□□□ 0.68
NKX6-2Q9C056 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NKX6-2Q9C056 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.29■□□□□ 0.68
NKX6-2Q9C056 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NKX6-2Q9C056 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NKX6-2Q9C056 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NKX6-2Q9C056 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NKX6-2Q9C056 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NKX6-2Q9C056 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.28■□□□□ 0.68
NKX6-2Q9C056 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC19.28■□□□□ 0.68
NKX6-2Q9C056 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NKX6-2Q9C056 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NKX6-2Q9C056 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.28■□□□□ 0.68
NKX6-2Q9C056 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
NKX6-2Q9C056 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NKX6-2Q9C056 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
NKX6-2Q9C056 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NKX6-2Q9C056 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
NKX6-2Q9C056 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NKX6-2Q9C056 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NKX6-2Q9C056 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NKX6-2Q9C056 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NKX6-2Q9C056 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
NKX6-2Q9C056 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
NKX6-2Q9C056 C9orf163-202ENST00000624034 2573 ntBASIC19.27■□□□□ 0.67
NKX6-2Q9C056 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
NKX6-2Q9C056 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NKX6-2Q9C056 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NKX6-2Q9C056 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NKX6-2Q9C056 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NKX6-2Q9C056 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NKX6-2Q9C056 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC19.26■□□□□ 0.67
NKX6-2Q9C056 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
NKX6-2Q9C056 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NKX6-2Q9C056 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NKX6-2Q9C056 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NKX6-2Q9C056 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC19.25■□□□□ 0.67
NKX6-2Q9C056 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NKX6-2Q9C056 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC19.25■□□□□ 0.67
NKX6-2Q9C056 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC19.25■□□□□ 0.67
NKX6-2Q9C056 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NKX6-2Q9C056 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NKX6-2Q9C056 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NKX6-2Q9C056 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
NKX6-2Q9C056 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.25■□□□□ 0.67
NKX6-2Q9C056 C1orf229-201ENST00000623686 2258 ntBASIC19.25■□□□□ 0.67
NKX6-2Q9C056 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NKX6-2Q9C056 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NKX6-2Q9C056 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NKX6-2Q9C056 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NKX6-2Q9C056 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
NKX6-2Q9C056 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
NKX6-2Q9C056 MEST-211ENST00000437945 1455 ntTSL 5 BASIC19.24■□□□□ 0.67
NKX6-2Q9C056 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NKX6-2Q9C056 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NKX6-2Q9C056 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NKX6-2Q9C056 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms