Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.86■■□□□ 1.09
SNRNP40Q96DI7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.86■■□□□ 1.09
SNRNP40Q96DI7 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SNRNP40Q96DI7 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SNRNP40Q96DI7 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
SNRNP40Q96DI7 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SNRNP40Q96DI7 TSPY9P-201ENST00000440215 945 ntBASIC21.85■■□□□ 1.09
SNRNP40Q96DI7 TSPY11P-201ENST00000442607 1045 ntBASIC21.85■■□□□ 1.09
SNRNP40Q96DI7 AC137630.3-201ENST00000607245 391 ntBASIC21.85■■□□□ 1.09
SNRNP40Q96DI7 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.85■■□□□ 1.09
SNRNP40Q96DI7 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.85■■□□□ 1.09
SNRNP40Q96DI7 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
SNRNP40Q96DI7 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SNRNP40Q96DI7 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.84■■□□□ 1.09
SNRNP40Q96DI7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.84■■□□□ 1.09
SNRNP40Q96DI7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.83■■□□□ 1.09
SNRNP40Q96DI7 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SNRNP40Q96DI7 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SNRNP40Q96DI7 AL449106.1-201ENST00000608517 1980 ntBASIC21.82■■□□□ 1.08
SNRNP40Q96DI7 MIR638-201ENST00000385237 100 ntBASIC21.82■■□□□ 1.08
SNRNP40Q96DI7 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
SNRNP40Q96DI7 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.82■■□□□ 1.08
SNRNP40Q96DI7 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNRNP40Q96DI7 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SNRNP40Q96DI7 AC021242.3-201ENST00000607598 1377 ntBASIC21.81■■□□□ 1.08
SNRNP40Q96DI7 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
SNRNP40Q96DI7 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNRNP40Q96DI7 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SNRNP40Q96DI7 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.8■■□□□ 1.08
SNRNP40Q96DI7 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.8■■□□□ 1.08
SNRNP40Q96DI7 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.8■■□□□ 1.08
SNRNP40Q96DI7 AC120024.1-201ENST00000562672 995 ntBASIC21.8■■□□□ 1.08
SNRNP40Q96DI7 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNRNP40Q96DI7 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNRNP40Q96DI7 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNRNP40Q96DI7 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNRNP40Q96DI7 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.79■■□□□ 1.08
SNRNP40Q96DI7 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNRNP40Q96DI7 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.79■■□□□ 1.08
SNRNP40Q96DI7 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNRNP40Q96DI7 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.79■■□□□ 1.08
SNRNP40Q96DI7 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNRNP40Q96DI7 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
SNRNP40Q96DI7 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
SNRNP40Q96DI7 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNRNP40Q96DI7 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SNRNP40Q96DI7 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SNRNP40Q96DI7 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.78■■□□□ 1.08
SNRNP40Q96DI7 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.78■■□□□ 1.08
SNRNP40Q96DI7 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNRNP40Q96DI7 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNRNP40Q96DI7 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNRNP40Q96DI7 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNRNP40Q96DI7 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNRNP40Q96DI7 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNRNP40Q96DI7 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.77■■□□□ 1.08
SNRNP40Q96DI7 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.77■■□□□ 1.08
SNRNP40Q96DI7 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNRNP40Q96DI7 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
SNRNP40Q96DI7 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNRNP40Q96DI7 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNRNP40Q96DI7 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
SNRNP40Q96DI7 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNRNP40Q96DI7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.76■■□□□ 1.07
SNRNP40Q96DI7 AL139246.5-201ENST00000606645 996 ntBASIC21.76■■□□□ 1.07
SNRNP40Q96DI7 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNRNP40Q96DI7 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
SNRNP40Q96DI7 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNRNP40Q96DI7 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.75■■□□□ 1.07
SNRNP40Q96DI7 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
SNRNP40Q96DI7 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNRNP40Q96DI7 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNRNP40Q96DI7 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNRNP40Q96DI7 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNRNP40Q96DI7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.75■■□□□ 1.07
SNRNP40Q96DI7 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SNRNP40Q96DI7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.75■■□□□ 1.07
SNRNP40Q96DI7 AC092028.1-203ENST00000608262 953 ntBASIC21.75■■□□□ 1.07
SNRNP40Q96DI7 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNRNP40Q96DI7 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.75■■□□□ 1.07
SNRNP40Q96DI7 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
SNRNP40Q96DI7 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
SNRNP40Q96DI7 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNRNP40Q96DI7 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.74■■□□□ 1.07
SNRNP40Q96DI7 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.74■■□□□ 1.07
SNRNP40Q96DI7 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.74■■□□□ 1.07
SNRNP40Q96DI7 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.74■■□□□ 1.07
SNRNP40Q96DI7 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.74■■□□□ 1.07
SNRNP40Q96DI7 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SNRNP40Q96DI7 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SNRNP40Q96DI7 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNRNP40Q96DI7 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.73■■□□□ 1.07
SNRNP40Q96DI7 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.73■■□□□ 1.07
SNRNP40Q96DI7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SNRNP40Q96DI7 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.73■■□□□ 1.07
SNRNP40Q96DI7 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
SNRNP40Q96DI7 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SNRNP40Q96DI7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNRNP40Q96DI7 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.72■■□□□ 1.07
SNRNP40Q96DI7 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms