Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC18.86■□□□□ 0.61
MBD3L1Q8WWY6 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
MBD3L1Q8WWY6 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MBD3L1Q8WWY6 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MBD3L1Q8WWY6 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MBD3L1Q8WWY6 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MBD3L1Q8WWY6 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MBD3L1Q8WWY6 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MBD3L1Q8WWY6 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
MBD3L1Q8WWY6 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC18.85■□□□□ 0.61
MBD3L1Q8WWY6 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
MBD3L1Q8WWY6 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MBD3L1Q8WWY6 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MBD3L1Q8WWY6 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
MBD3L1Q8WWY6 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MBD3L1Q8WWY6 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
MBD3L1Q8WWY6 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC18.84■□□□□ 0.61
MBD3L1Q8WWY6 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MBD3L1Q8WWY6 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MBD3L1Q8WWY6 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MBD3L1Q8WWY6 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.83■□□□□ 0.61
MBD3L1Q8WWY6 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
MBD3L1Q8WWY6 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
MBD3L1Q8WWY6 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
MBD3L1Q8WWY6 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.83■□□□□ 0.61
MBD3L1Q8WWY6 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
MBD3L1Q8WWY6 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
MBD3L1Q8WWY6 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MBD3L1Q8WWY6 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MBD3L1Q8WWY6 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
MBD3L1Q8WWY6 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
MBD3L1Q8WWY6 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC18.82■□□□□ 0.6
MBD3L1Q8WWY6 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
MBD3L1Q8WWY6 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
MBD3L1Q8WWY6 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
MBD3L1Q8WWY6 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MBD3L1Q8WWY6 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MBD3L1Q8WWY6 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MBD3L1Q8WWY6 SETD8P1-201ENST00000623146 1180 ntBASIC18.81■□□□□ 0.6
MBD3L1Q8WWY6 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
MBD3L1Q8WWY6 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MBD3L1Q8WWY6 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MBD3L1Q8WWY6 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC18.8■□□□□ 0.6
MBD3L1Q8WWY6 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC18.8■□□□□ 0.6
MBD3L1Q8WWY6 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MBD3L1Q8WWY6 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MBD3L1Q8WWY6 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
MBD3L1Q8WWY6 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC18.8■□□□□ 0.6
MBD3L1Q8WWY6 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
MBD3L1Q8WWY6 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
MBD3L1Q8WWY6 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MBD3L1Q8WWY6 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
MBD3L1Q8WWY6 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MBD3L1Q8WWY6 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MBD3L1Q8WWY6 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC18.79■□□□□ 0.6
MBD3L1Q8WWY6 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
MBD3L1Q8WWY6 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.79■□□□□ 0.6
MBD3L1Q8WWY6 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MBD3L1Q8WWY6 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MBD3L1Q8WWY6 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MBD3L1Q8WWY6 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MBD3L1Q8WWY6 PEX7-203ENST00000541292 945 ntTSL 5 BASIC18.79■□□□□ 0.6
MBD3L1Q8WWY6 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MBD3L1Q8WWY6 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC18.79■□□□□ 0.6
MBD3L1Q8WWY6 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MBD3L1Q8WWY6 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MBD3L1Q8WWY6 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MBD3L1Q8WWY6 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
MBD3L1Q8WWY6 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
MBD3L1Q8WWY6 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
MBD3L1Q8WWY6 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC18.78■□□□□ 0.6
MBD3L1Q8WWY6 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
MBD3L1Q8WWY6 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.78■□□□□ 0.6
MBD3L1Q8WWY6 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MBD3L1Q8WWY6 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MBD3L1Q8WWY6 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
MBD3L1Q8WWY6 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC18.77■□□□□ 0.6
MBD3L1Q8WWY6 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC18.77■□□□□ 0.6
MBD3L1Q8WWY6 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
MBD3L1Q8WWY6 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
MBD3L1Q8WWY6 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MBD3L1Q8WWY6 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MBD3L1Q8WWY6 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MBD3L1Q8WWY6 RPS2-209ENST00000529806 993 ntTSL 3 BASIC18.76■□□□□ 0.59
MBD3L1Q8WWY6 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MBD3L1Q8WWY6 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC18.76■□□□□ 0.59
MBD3L1Q8WWY6 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MBD3L1Q8WWY6 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.75■□□□□ 0.59
MBD3L1Q8WWY6 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
MBD3L1Q8WWY6 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MBD3L1Q8WWY6 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MBD3L1Q8WWY6 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MBD3L1Q8WWY6 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MBD3L1Q8WWY6 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MBD3L1Q8WWY6 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
MBD3L1Q8WWY6 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
MBD3L1Q8WWY6 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
MBD3L1Q8WWY6 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
MBD3L1Q8WWY6 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC18.74■□□□□ 0.59
MBD3L1Q8WWY6 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 8.3 ms