Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
RP1L1Q8IWN7 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.84■■□□□ 1.09
RP1L1Q8IWN7 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RP1L1Q8IWN7 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.84■■□□□ 1.09
RP1L1Q8IWN7 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
RP1L1Q8IWN7 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.83■■□□□ 1.09
RP1L1Q8IWN7 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RP1L1Q8IWN7 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
RP1L1Q8IWN7 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.83■■□□□ 1.08
RP1L1Q8IWN7 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.83■■□□□ 1.08
RP1L1Q8IWN7 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
RP1L1Q8IWN7 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RP1L1Q8IWN7 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RP1L1Q8IWN7 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.82■■□□□ 1.08
RP1L1Q8IWN7 AL139246.5-201ENST00000606645 996 ntBASIC21.82■■□□□ 1.08
RP1L1Q8IWN7 AC092028.1-203ENST00000608262 953 ntBASIC21.82■■□□□ 1.08
RP1L1Q8IWN7 AC005837.3-201ENST00000612163 286 ntBASIC21.82■■□□□ 1.08
RP1L1Q8IWN7 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RP1L1Q8IWN7 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.82■■□□□ 1.08
RP1L1Q8IWN7 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RP1L1Q8IWN7 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.82■■□□□ 1.08
RP1L1Q8IWN7 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RP1L1Q8IWN7 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RP1L1Q8IWN7 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RP1L1Q8IWN7 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.81■■□□□ 1.08
RP1L1Q8IWN7 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
RP1L1Q8IWN7 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
RP1L1Q8IWN7 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RP1L1Q8IWN7 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RP1L1Q8IWN7 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RP1L1Q8IWN7 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.79■■□□□ 1.08
RP1L1Q8IWN7 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
RP1L1Q8IWN7 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.79■■□□□ 1.08
RP1L1Q8IWN7 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RP1L1Q8IWN7 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
RP1L1Q8IWN7 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RP1L1Q8IWN7 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.79■■□□□ 1.08
RP1L1Q8IWN7 AC137630.3-201ENST00000607245 391 ntBASIC21.79■■□□□ 1.08
RP1L1Q8IWN7 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RP1L1Q8IWN7 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
RP1L1Q8IWN7 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RP1L1Q8IWN7 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
RP1L1Q8IWN7 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.78■■□□□ 1.08
RP1L1Q8IWN7 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RP1L1Q8IWN7 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RP1L1Q8IWN7 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.77■■□□□ 1.08
RP1L1Q8IWN7 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RP1L1Q8IWN7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RP1L1Q8IWN7 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.77■■□□□ 1.07
RP1L1Q8IWN7 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.77■■□□□ 1.07
RP1L1Q8IWN7 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
RP1L1Q8IWN7 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RP1L1Q8IWN7 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
RP1L1Q8IWN7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.75■■□□□ 1.07
RP1L1Q8IWN7 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RP1L1Q8IWN7 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.75■■□□□ 1.07
RP1L1Q8IWN7 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC21.75■■□□□ 1.07
RP1L1Q8IWN7 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC21.75■■□□□ 1.07
RP1L1Q8IWN7 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RP1L1Q8IWN7 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RP1L1Q8IWN7 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.74■■□□□ 1.07
RP1L1Q8IWN7 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RP1L1Q8IWN7 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RP1L1Q8IWN7 MIR4466-201ENST00000606121 54 ntBASIC21.74■■□□□ 1.07
RP1L1Q8IWN7 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.74■■□□□ 1.07
RP1L1Q8IWN7 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
RP1L1Q8IWN7 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
RP1L1Q8IWN7 KRT18P10-201ENST00000388836 1287 ntBASIC21.74■■□□□ 1.07
RP1L1Q8IWN7 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RP1L1Q8IWN7 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.73■■□□□ 1.07
RP1L1Q8IWN7 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.73■■□□□ 1.07
RP1L1Q8IWN7 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RP1L1Q8IWN7 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.73■■□□□ 1.07
RP1L1Q8IWN7 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RP1L1Q8IWN7 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
RP1L1Q8IWN7 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RP1L1Q8IWN7 LINC01003-201ENST00000564834 1764 ntBASIC21.72■■□□□ 1.07
RP1L1Q8IWN7 ST7-205ENST00000393446 2114 ntTSL 5 BASIC21.72■■□□□ 1.07
RP1L1Q8IWN7 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RP1L1Q8IWN7 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RP1L1Q8IWN7 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RP1L1Q8IWN7 SUDS3P1-201ENST00000505831 966 ntBASIC21.71■■□□□ 1.07
RP1L1Q8IWN7 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RP1L1Q8IWN7 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RP1L1Q8IWN7 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RP1L1Q8IWN7 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RP1L1Q8IWN7 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RP1L1Q8IWN7 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RP1L1Q8IWN7 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.71■■□□□ 1.07
RP1L1Q8IWN7 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
RP1L1Q8IWN7 TSPY9P-201ENST00000440215 945 ntBASIC21.71■■□□□ 1.07
RP1L1Q8IWN7 TSPY11P-201ENST00000442607 1045 ntBASIC21.71■■□□□ 1.07
RP1L1Q8IWN7 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
RP1L1Q8IWN7 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RP1L1Q8IWN7 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
RP1L1Q8IWN7 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.7■■□□□ 1.06
RP1L1Q8IWN7 AC026271.2-201ENST00000428091 497 ntBASIC21.7■■□□□ 1.06
RP1L1Q8IWN7 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.7■■□□□ 1.06
RP1L1Q8IWN7 AC133561.4-201ENST00000566112 224 ntBASIC21.7■■□□□ 1.06
RP1L1Q8IWN7 AC021242.3-201ENST00000607598 1377 ntBASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms