Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC25.54■■□□□ 1.68
RNF135Q8IUD6 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
RNF135Q8IUD6 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RNF135Q8IUD6 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC25.53■■□□□ 1.68
RNF135Q8IUD6 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
RNF135Q8IUD6 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
RNF135Q8IUD6 KRT16P3-201ENST00000439127 1283 ntBASIC25.53■■□□□ 1.68
RNF135Q8IUD6 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC25.53■■□□□ 1.68
RNF135Q8IUD6 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
RNF135Q8IUD6 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC25.53■■□□□ 1.68
RNF135Q8IUD6 AC087393.1-201ENST00000582896 145 ntBASIC25.53■■□□□ 1.68
RNF135Q8IUD6 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC25.53■■□□□ 1.68
RNF135Q8IUD6 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
RNF135Q8IUD6 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC25.52■■□□□ 1.68
RNF135Q8IUD6 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
RNF135Q8IUD6 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
RNF135Q8IUD6 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RNF135Q8IUD6 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC25.52■■□□□ 1.68
RNF135Q8IUD6 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RNF135Q8IUD6 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RNF135Q8IUD6 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RNF135Q8IUD6 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
RNF135Q8IUD6 BX664725.1-201ENST00000438252 379 ntBASIC25.51■■□□□ 1.67
RNF135Q8IUD6 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
RNF135Q8IUD6 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
RNF135Q8IUD6 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC25.5■■□□□ 1.67
RNF135Q8IUD6 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC25.5■■□□□ 1.67
RNF135Q8IUD6 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
RNF135Q8IUD6 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC25.49■■□□□ 1.67
RNF135Q8IUD6 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC25.48■■□□□ 1.67
RNF135Q8IUD6 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
RNF135Q8IUD6 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RNF135Q8IUD6 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RNF135Q8IUD6 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
RNF135Q8IUD6 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
RNF135Q8IUD6 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
RNF135Q8IUD6 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
RNF135Q8IUD6 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RNF135Q8IUD6 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RNF135Q8IUD6 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
RNF135Q8IUD6 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
RNF135Q8IUD6 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
RNF135Q8IUD6 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC25.45■■□□□ 1.66
RNF135Q8IUD6 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC25.45■■□□□ 1.66
RNF135Q8IUD6 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC25.44■■□□□ 1.66
RNF135Q8IUD6 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RNF135Q8IUD6 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC25.44■■□□□ 1.66
RNF135Q8IUD6 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RNF135Q8IUD6 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
RNF135Q8IUD6 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
RNF135Q8IUD6 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC25.43■■□□□ 1.66
RNF135Q8IUD6 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC25.43■■□□□ 1.66
RNF135Q8IUD6 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
RNF135Q8IUD6 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
RNF135Q8IUD6 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RNF135Q8IUD6 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC25.42■■□□□ 1.66
RNF135Q8IUD6 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC25.42■■□□□ 1.66
RNF135Q8IUD6 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC25.42■■□□□ 1.66
RNF135Q8IUD6 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RNF135Q8IUD6 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
RNF135Q8IUD6 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC25.41■■□□□ 1.66
RNF135Q8IUD6 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
RNF135Q8IUD6 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
RNF135Q8IUD6 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
RNF135Q8IUD6 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RNF135Q8IUD6 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
RNF135Q8IUD6 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RNF135Q8IUD6 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
RNF135Q8IUD6 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
RNF135Q8IUD6 RPS2P7-201ENST00000447334 885 ntBASIC25.4■■□□□ 1.66
RNF135Q8IUD6 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC25.4■■□□□ 1.66
RNF135Q8IUD6 TRIR-202ENST00000588213 841 ntTSL 3 BASIC25.4■■□□□ 1.66
RNF135Q8IUD6 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
RNF135Q8IUD6 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
RNF135Q8IUD6 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
RNF135Q8IUD6 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC25.39■■□□□ 1.66
RNF135Q8IUD6 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC25.39■■□□□ 1.66
RNF135Q8IUD6 LINC01003-201ENST00000564834 1764 ntBASIC25.39■■□□□ 1.66
RNF135Q8IUD6 AL359504.2-201ENST00000605506 1601 ntBASIC25.39■■□□□ 1.66
RNF135Q8IUD6 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
RNF135Q8IUD6 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC25.39■■□□□ 1.66
RNF135Q8IUD6 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC25.39■■□□□ 1.66
RNF135Q8IUD6 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC25.39■■□□□ 1.66
RNF135Q8IUD6 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC25.39■■□□□ 1.66
RNF135Q8IUD6 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.65
RNF135Q8IUD6 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RNF135Q8IUD6 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC25.38■■□□□ 1.65
RNF135Q8IUD6 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
RNF135Q8IUD6 AC131281.2-201ENST00000520478 145 ntBASIC25.38■■□□□ 1.65
RNF135Q8IUD6 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC25.38■■□□□ 1.65
RNF135Q8IUD6 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RNF135Q8IUD6 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
RNF135Q8IUD6 TSPY9P-201ENST00000440215 945 ntBASIC25.37■■□□□ 1.65
RNF135Q8IUD6 TSPY11P-201ENST00000442607 1045 ntBASIC25.37■■□□□ 1.65
RNF135Q8IUD6 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC25.37■■□□□ 1.65
RNF135Q8IUD6 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC25.37■■□□□ 1.65
RNF135Q8IUD6 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC25.37■■□□□ 1.65
RNF135Q8IUD6 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RNF135Q8IUD6 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RNF135Q8IUD6 AC092666.2-201ENST00000613287 246 ntBASIC25.36■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms