Protein–RNA interactions for Protein: Q7Z4I7

LIMS2, LIM and senescent cell antigen-like-containing domain protein 2, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2Q7Z4I7 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
LIMS2Q7Z4I7 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
LIMS2Q7Z4I7 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC25.69■■□□□ 1.7
LIMS2Q7Z4I7 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
LIMS2Q7Z4I7 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC25.69■■□□□ 1.7
LIMS2Q7Z4I7 RPS2P7-201ENST00000447334 885 ntBASIC25.69■■□□□ 1.7
LIMS2Q7Z4I7 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC25.69■■□□□ 1.7
LIMS2Q7Z4I7 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
LIMS2Q7Z4I7 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
LIMS2Q7Z4I7 KRT18P10-201ENST00000388836 1287 ntBASIC25.68■■□□□ 1.7
LIMS2Q7Z4I7 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
LIMS2Q7Z4I7 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
LIMS2Q7Z4I7 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
LIMS2Q7Z4I7 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC25.68■■□□□ 1.7
LIMS2Q7Z4I7 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
LIMS2Q7Z4I7 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
LIMS2Q7Z4I7 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
LIMS2Q7Z4I7 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
LIMS2Q7Z4I7 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
LIMS2Q7Z4I7 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
LIMS2Q7Z4I7 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
LIMS2Q7Z4I7 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
LIMS2Q7Z4I7 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC25.66■■□□□ 1.7
LIMS2Q7Z4I7 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC25.66■■□□□ 1.7
LIMS2Q7Z4I7 AC074183.2-201ENST00000623112 922 ntBASIC25.66■■□□□ 1.7
LIMS2Q7Z4I7 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
LIMS2Q7Z4I7 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC25.66■■□□□ 1.7
LIMS2Q7Z4I7 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC25.66■■□□□ 1.7
LIMS2Q7Z4I7 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
LIMS2Q7Z4I7 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
LIMS2Q7Z4I7 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
LIMS2Q7Z4I7 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC25.65■■□□□ 1.7
LIMS2Q7Z4I7 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC25.65■■□□□ 1.7
LIMS2Q7Z4I7 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
LIMS2Q7Z4I7 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
LIMS2Q7Z4I7 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
LIMS2Q7Z4I7 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
LIMS2Q7Z4I7 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC25.64■■□□□ 1.7
LIMS2Q7Z4I7 PVT1_1.1-201ENST00000615125 194 ntBASIC25.64■■□□□ 1.7
LIMS2Q7Z4I7 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
LIMS2Q7Z4I7 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.69
LIMS2Q7Z4I7 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC25.63■■□□□ 1.69
LIMS2Q7Z4I7 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
LIMS2Q7Z4I7 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
LIMS2Q7Z4I7 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
LIMS2Q7Z4I7 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC25.62■■□□□ 1.69
LIMS2Q7Z4I7 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
LIMS2Q7Z4I7 AC019171.1-201ENST00000601251 1056 ntBASIC25.62■■□□□ 1.69
LIMS2Q7Z4I7 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC25.62■■□□□ 1.69
LIMS2Q7Z4I7 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
LIMS2Q7Z4I7 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
LIMS2Q7Z4I7 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
LIMS2Q7Z4I7 IDNK-201ENST00000376417 511 ntTSL 5 BASIC25.61■■□□□ 1.69
LIMS2Q7Z4I7 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
LIMS2Q7Z4I7 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
LIMS2Q7Z4I7 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
LIMS2Q7Z4I7 LONRF2P2-201ENST00000439212 571 ntBASIC25.61■■□□□ 1.69
LIMS2Q7Z4I7 HYI-210ENST00000486909 905 ntTSL 5 BASIC25.61■■□□□ 1.69
LIMS2Q7Z4I7 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
LIMS2Q7Z4I7 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
LIMS2Q7Z4I7 ERN1-208ENST00000606895 2068 ntBASIC25.6■■□□□ 1.69
LIMS2Q7Z4I7 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
LIMS2Q7Z4I7 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC25.6■■□□□ 1.69
LIMS2Q7Z4I7 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC25.6■■□□□ 1.69
LIMS2Q7Z4I7 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
LIMS2Q7Z4I7 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
LIMS2Q7Z4I7 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
LIMS2Q7Z4I7 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
LIMS2Q7Z4I7 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
LIMS2Q7Z4I7 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC25.59■■□□□ 1.69
LIMS2Q7Z4I7 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC25.59■■□□□ 1.69
LIMS2Q7Z4I7 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC25.59■■□□□ 1.69
LIMS2Q7Z4I7 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
LIMS2Q7Z4I7 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
LIMS2Q7Z4I7 AC092803.2-201ENST00000564287 1899 ntBASIC25.58■■□□□ 1.69
LIMS2Q7Z4I7 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
LIMS2Q7Z4I7 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC25.58■■□□□ 1.69
LIMS2Q7Z4I7 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC25.58■■□□□ 1.69
LIMS2Q7Z4I7 MTX2-204ENST00000443241 799 ntTSL 3 BASIC25.58■■□□□ 1.69
LIMS2Q7Z4I7 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
LIMS2Q7Z4I7 AC010980.1-201ENST00000587192 1142 ntBASIC25.58■■□□□ 1.69
LIMS2Q7Z4I7 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC25.58■■□□□ 1.69
LIMS2Q7Z4I7 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
LIMS2Q7Z4I7 AC096887.2-201ENST00000623443 1957 ntBASIC25.58■■□□□ 1.69
LIMS2Q7Z4I7 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC25.57■■□□□ 1.68
LIMS2Q7Z4I7 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
LIMS2Q7Z4I7 BEX3-202ENST00000372634 753 ntTSL 2 BASIC25.57■■□□□ 1.68
LIMS2Q7Z4I7 AC139795.1-202ENST00000500444 432 ntBASIC25.57■■□□□ 1.68
LIMS2Q7Z4I7 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
LIMS2Q7Z4I7 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC25.57■■□□□ 1.68
LIMS2Q7Z4I7 AC010501.1-201ENST00000606270 1962 ntBASIC25.56■■□□□ 1.68
LIMS2Q7Z4I7 SNAI3-AS1-204ENST00000567997 2048 ntBASIC25.56■■□□□ 1.68
LIMS2Q7Z4I7 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
LIMS2Q7Z4I7 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
LIMS2Q7Z4I7 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
LIMS2Q7Z4I7 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
LIMS2Q7Z4I7 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
LIMS2Q7Z4I7 BHLHE23-202ENST00000612929 1109 ntBASIC25.55■■□□□ 1.68
LIMS2Q7Z4I7 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
LIMS2Q7Z4I7 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.55■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms