Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
LYSMD4Q5XG99 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.92■■□□□ 1.42
LYSMD4Q5XG99 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.92■■□□□ 1.42
LYSMD4Q5XG99 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.92■■□□□ 1.42
LYSMD4Q5XG99 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
LYSMD4Q5XG99 AC021242.3-201ENST00000607598 1377 ntBASIC23.91■■□□□ 1.42
LYSMD4Q5XG99 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.91■■□□□ 1.42
LYSMD4Q5XG99 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
LYSMD4Q5XG99 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
LYSMD4Q5XG99 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
LYSMD4Q5XG99 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
LYSMD4Q5XG99 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
LYSMD4Q5XG99 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.9■■□□□ 1.42
LYSMD4Q5XG99 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
LYSMD4Q5XG99 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
LYSMD4Q5XG99 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC23.9■■□□□ 1.42
LYSMD4Q5XG99 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
LYSMD4Q5XG99 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
LYSMD4Q5XG99 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.89■■□□□ 1.42
LYSMD4Q5XG99 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
LYSMD4Q5XG99 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
LYSMD4Q5XG99 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.89■■□□□ 1.41
LYSMD4Q5XG99 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
LYSMD4Q5XG99 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.88■■□□□ 1.41
LYSMD4Q5XG99 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.88■■□□□ 1.41
LYSMD4Q5XG99 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC23.88■■□□□ 1.41
LYSMD4Q5XG99 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.88■■□□□ 1.41
LYSMD4Q5XG99 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
LYSMD4Q5XG99 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
LYSMD4Q5XG99 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
LYSMD4Q5XG99 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
LYSMD4Q5XG99 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
LYSMD4Q5XG99 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
LYSMD4Q5XG99 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
LYSMD4Q5XG99 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
LYSMD4Q5XG99 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
LYSMD4Q5XG99 MIR638-201ENST00000385237 100 ntBASIC23.87■■□□□ 1.41
LYSMD4Q5XG99 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
LYSMD4Q5XG99 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
LYSMD4Q5XG99 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC23.86■■□□□ 1.41
LYSMD4Q5XG99 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
LYSMD4Q5XG99 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.86■■□□□ 1.41
LYSMD4Q5XG99 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
LYSMD4Q5XG99 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
LYSMD4Q5XG99 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
LYSMD4Q5XG99 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.85■■□□□ 1.41
LYSMD4Q5XG99 AC092028.1-203ENST00000608262 953 ntBASIC23.85■■□□□ 1.41
LYSMD4Q5XG99 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.85■■□□□ 1.41
LYSMD4Q5XG99 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
LYSMD4Q5XG99 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
LYSMD4Q5XG99 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
LYSMD4Q5XG99 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
LYSMD4Q5XG99 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.84■■□□□ 1.41
LYSMD4Q5XG99 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.84■■□□□ 1.41
LYSMD4Q5XG99 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.84■■□□□ 1.41
LYSMD4Q5XG99 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC23.84■■□□□ 1.41
LYSMD4Q5XG99 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
LYSMD4Q5XG99 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
LYSMD4Q5XG99 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC23.83■■□□□ 1.41
LYSMD4Q5XG99 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
LYSMD4Q5XG99 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
LYSMD4Q5XG99 AL139246.5-201ENST00000606645 996 ntBASIC23.83■■□□□ 1.41
LYSMD4Q5XG99 RALB-208ENST00000631312 311 ntTSL 5 BASIC23.83■■□□□ 1.41
LYSMD4Q5XG99 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
LYSMD4Q5XG99 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
LYSMD4Q5XG99 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC23.82■■□□□ 1.4
LYSMD4Q5XG99 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.82■■□□□ 1.4
LYSMD4Q5XG99 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC23.82■■□□□ 1.4
LYSMD4Q5XG99 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LYSMD4Q5XG99 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
LYSMD4Q5XG99 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
LYSMD4Q5XG99 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
LYSMD4Q5XG99 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
LYSMD4Q5XG99 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.81■■□□□ 1.4
LYSMD4Q5XG99 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC23.81■■□□□ 1.4
LYSMD4Q5XG99 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.81■■□□□ 1.4
LYSMD4Q5XG99 AC131281.2-201ENST00000520478 145 ntBASIC23.81■■□□□ 1.4
LYSMD4Q5XG99 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
LYSMD4Q5XG99 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.81■■□□□ 1.4
LYSMD4Q5XG99 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LYSMD4Q5XG99 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.81■■□□□ 1.4
LYSMD4Q5XG99 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LYSMD4Q5XG99 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC23.8■■□□□ 1.4
LYSMD4Q5XG99 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LYSMD4Q5XG99 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LYSMD4Q5XG99 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.8■■□□□ 1.4
LYSMD4Q5XG99 BX255925.1-201ENST00000566954 1854 ntBASIC23.8■■□□□ 1.4
LYSMD4Q5XG99 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.8■■□□□ 1.4
LYSMD4Q5XG99 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LYSMD4Q5XG99 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LYSMD4Q5XG99 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
LYSMD4Q5XG99 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.79■■□□□ 1.4
LYSMD4Q5XG99 MIR4281-201ENST00000580852 62 ntBASIC23.79■■□□□ 1.4
LYSMD4Q5XG99 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LYSMD4Q5XG99 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
LYSMD4Q5XG99 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LYSMD4Q5XG99 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LYSMD4Q5XG99 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC23.78■■□□□ 1.4
LYSMD4Q5XG99 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
LYSMD4Q5XG99 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms