Protein–RNA interactions for Protein: Q5VVS0

C1orf140, Putative uncharacterized protein C1orf140, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf140Q5VVS0 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
C1orf140Q5VVS0 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
C1orf140Q5VVS0 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
C1orf140Q5VVS0 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
C1orf140Q5VVS0 HSD17B1P1-201ENST00000590052 955 ntBASIC21.71■■□□□ 1.07
C1orf140Q5VVS0 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
C1orf140Q5VVS0 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
C1orf140Q5VVS0 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.7■■□□□ 1.06
C1orf140Q5VVS0 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
C1orf140Q5VVS0 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
C1orf140Q5VVS0 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
C1orf140Q5VVS0 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
C1orf140Q5VVS0 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
C1orf140Q5VVS0 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
C1orf140Q5VVS0 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.69■■□□□ 1.06
C1orf140Q5VVS0 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
C1orf140Q5VVS0 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.69■■□□□ 1.06
C1orf140Q5VVS0 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
C1orf140Q5VVS0 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
C1orf140Q5VVS0 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
C1orf140Q5VVS0 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.68■■□□□ 1.06
C1orf140Q5VVS0 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
C1orf140Q5VVS0 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
C1orf140Q5VVS0 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
C1orf140Q5VVS0 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.68■■□□□ 1.06
C1orf140Q5VVS0 AC026202.3-201ENST00000600805 1127 ntBASIC21.68■■□□□ 1.06
C1orf140Q5VVS0 RAP2CP1-202ENST00000605179 643 ntBASIC21.68■■□□□ 1.06
C1orf140Q5VVS0 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.68■■□□□ 1.06
C1orf140Q5VVS0 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
C1orf140Q5VVS0 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
C1orf140Q5VVS0 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.68■■□□□ 1.06
C1orf140Q5VVS0 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
C1orf140Q5VVS0 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
C1orf140Q5VVS0 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
C1orf140Q5VVS0 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
C1orf140Q5VVS0 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
C1orf140Q5VVS0 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
C1orf140Q5VVS0 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.66■■□□□ 1.06
C1orf140Q5VVS0 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
C1orf140Q5VVS0 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
C1orf140Q5VVS0 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
C1orf140Q5VVS0 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
C1orf140Q5VVS0 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
C1orf140Q5VVS0 AC020928.2-201ENST00000588717 2197 ntBASIC21.65■■□□□ 1.06
C1orf140Q5VVS0 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
C1orf140Q5VVS0 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
C1orf140Q5VVS0 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
C1orf140Q5VVS0 RARRES2P2-201ENST00000394842 485 ntBASIC21.65■■□□□ 1.06
C1orf140Q5VVS0 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
C1orf140Q5VVS0 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
C1orf140Q5VVS0 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
C1orf140Q5VVS0 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
C1orf140Q5VVS0 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
C1orf140Q5VVS0 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
C1orf140Q5VVS0 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.63■■□□□ 1.05
C1orf140Q5VVS0 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.63■■□□□ 1.05
C1orf140Q5VVS0 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
C1orf140Q5VVS0 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
C1orf140Q5VVS0 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
C1orf140Q5VVS0 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
C1orf140Q5VVS0 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
C1orf140Q5VVS0 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
C1orf140Q5VVS0 AC009831.1-201ENST00000580420 1582 ntBASIC21.62■■□□□ 1.05
C1orf140Q5VVS0 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
C1orf140Q5VVS0 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
C1orf140Q5VVS0 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
C1orf140Q5VVS0 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.62■■□□□ 1.05
C1orf140Q5VVS0 AC133552.2-201ENST00000619106 1032 ntBASIC21.62■■□□□ 1.05
C1orf140Q5VVS0 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.62■■□□□ 1.05
C1orf140Q5VVS0 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
C1orf140Q5VVS0 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
C1orf140Q5VVS0 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
C1orf140Q5VVS0 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.61■■□□□ 1.05
C1orf140Q5VVS0 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.61■■□□□ 1.05
C1orf140Q5VVS0 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
C1orf140Q5VVS0 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.61■■□□□ 1.05
C1orf140Q5VVS0 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
C1orf140Q5VVS0 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
C1orf140Q5VVS0 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
C1orf140Q5VVS0 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
C1orf140Q5VVS0 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.6■■□□□ 1.05
C1orf140Q5VVS0 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
C1orf140Q5VVS0 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
C1orf140Q5VVS0 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
C1orf140Q5VVS0 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
C1orf140Q5VVS0 AC097639.1-201ENST00000565519 1891 ntBASIC21.59■■□□□ 1.05
C1orf140Q5VVS0 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.59■■□□□ 1.05
C1orf140Q5VVS0 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
C1orf140Q5VVS0 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
C1orf140Q5VVS0 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.58■■□□□ 1.05
C1orf140Q5VVS0 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
C1orf140Q5VVS0 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.58■■□□□ 1.04
C1orf140Q5VVS0 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
C1orf140Q5VVS0 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
C1orf140Q5VVS0 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
C1orf140Q5VVS0 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
C1orf140Q5VVS0 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
C1orf140Q5VVS0 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
C1orf140Q5VVS0 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
C1orf140Q5VVS0 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms