Protein–RNA interactions for Protein: Q4G0J3

LARP7, La-related protein 7, humanhuman

Known RBP eCLIP

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP7Q4G0J3 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.682e-8■■□□□ 12.5
LARP7Q4G0J3 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC25.14■■□□□ 1.622e-8■■□□□ 12.5
LARP7Q4G0J3 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.562e-8■■□□□ 12.5
LARP7Q4G0J3 VEGFA-220ENST00000519767 970 ntTSL 1 (best)24.77■■□□□ 1.562e-8■■□□□ 12.5
LARP7Q4G0J3 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC24.57■■□□□ 1.522e-8■■□□□ 12.5
LARP7Q4G0J3 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC24.57■■□□□ 1.522e-8■■□□□ 12.5
LARP7Q4G0J3 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC24.57■■□□□ 1.522e-8■■□□□ 12.5
LARP7Q4G0J3 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.522e-8■■□□□ 12.5
LARP7Q4G0J3 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.522e-8■■□□□ 12.5
LARP7Q4G0J3 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.522e-8■■□□□ 12.5
LARP7Q4G0J3 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC24.57■■□□□ 1.522e-8■■□□□ 12.5
LARP7Q4G0J3 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC24.57■■□□□ 1.522e-8■■□□□ 12.5
LARP7Q4G0J3 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.352e-8■■□□□ 12.5
LARP7Q4G0J3 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.09■□□□□ 0.812e-8■■□□□ 12.5
LARP7Q4G0J3 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.85■□□□□ 0.452e-8■■□□□ 12.5
LARP7Q4G0J3 NOP56-215ENST00000490753 640 ntTSL 29.53□□□□□ -0.881e-323■■□□□ 12.5
LARP7Q4G0J3 NOP56-205ENST00000462630 859 ntTSL 29.03□□□□□ -0.961e-323■■□□□ 12.5
LARP7Q4G0J3 NOP56-211ENST00000471023 592 ntTSL 27.48□□□□□ -1.211e-323■■□□□ 12.5
LARP7Q4G0J3 NOP56-212ENST00000480447 651 ntTSL 26.6□□□□□ -1.351e-323■■□□□ 12.5
LARP7Q4G0J3 SNHG1-216ENST00000541416 996 ntTSL 212.1□□□□□ -0.474e-12■■□□□ 12.4
LARP7Q4G0J3 SNHG1-222ENST00000545308 646 ntTSL 26.34□□□□□ -1.394e-12■■□□□ 12.4
LARP7Q4G0J3 SNHG1-207ENST00000537965 578 ntTSL 56.27□□□□□ -1.414e-12■■□□□ 12.4
LARP7Q4G0J3 ATG16L1-208ENST00000419681 644 ntTSL 515.69■□□□□ 0.16e-46■■□□□ 12.4
LARP7Q4G0J3 ATG16L1-217ENST00000492298 591 ntTSL 510.48□□□□□ -0.736e-46■■□□□ 12.4
LARP7Q4G0J3 SCARNA5-201ENST00000516201 276 ntBASIC6.28□□□□□ -1.46e-46■■□□□ 12.4
LARP7Q4G0J3 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.953e-6■■□□□ 12.3
LARP7Q4G0J3 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.873e-6■■□□□ 12.3
LARP7Q4G0J3 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.873e-6■■□□□ 12.3
LARP7Q4G0J3 APLP2-208ENST00000526330 582 ntTSL 320.47■□□□□ 0.877e-9■■□□□ 12.3
LARP7Q4G0J3 APLP2-209ENST00000527702 579 ntTSL 420.47■□□□□ 0.877e-9■■□□□ 12.3
LARP7Q4G0J3 APLP2-213ENST00000529701 573 ntTSL 520.47■□□□□ 0.877e-9■■□□□ 12.3
LARP7Q4G0J3 APLP2-223ENST00000534001 585 ntTSL 420.47■□□□□ 0.877e-9■■□□□ 12.3
LARP7Q4G0J3 APLP2-224ENST00000534582 556 ntTSL 520.47■□□□□ 0.877e-9■■□□□ 12.3
LARP7Q4G0J3 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.38■□□□□ 0.697e-9■■□□□ 12.3
LARP7Q4G0J3 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.39■□□□□ 0.537e-9■■□□□ 12.3
LARP7Q4G0J3 APLP2-219ENST00000533616 2041 ntTSL 217.89■□□□□ 0.467e-9■■□□□ 12.3
LARP7Q4G0J3 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.73■□□□□ 0.433e-6■■□□□ 12.3
LARP7Q4G0J3 APLP2-225ENST00000534761 551 ntTSL 516.39■□□□□ 0.217e-9■■□□□ 12.3
LARP7Q4G0J3 PEG3-209ENST00000599577 5052 ntAPPRIS P1 TSL 1 (best)16.27■□□□□ 0.23e-6■■□□□ 12.3
LARP7Q4G0J3 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.017e-9■■□□□ 12.3
LARP7Q4G0J3 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.83□□□□□ -0.041e-7■■□□□ 12.3
LARP7Q4G0J3 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.75□□□□□ -0.051e-7■■□□□ 12.3
LARP7Q4G0J3 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.11e-7■■□□□ 12.3
LARP7Q4G0J3 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.11e-7■■□□□ 12.3
LARP7Q4G0J3 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC14.41□□□□□ -0.11e-7■■□□□ 12.3
LARP7Q4G0J3 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.111e-7■■□□□ 12.3
LARP7Q4G0J3 PEG3-207ENST00000599534 5115 ntAPPRIS P1 TSL 1 (best)14.35□□□□□ -0.113e-6■■□□□ 12.3
LARP7Q4G0J3 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.147e-9■■□□□ 12.3
LARP7Q4G0J3 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.14□□□□□ -0.151e-7■■□□□ 12.3
LARP7Q4G0J3 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.217e-9■■□□□ 12.3
LARP7Q4G0J3 MLXIPL-202ENST00000345114 3079 ntTSL 1 (best)13.54□□□□□ -0.241e-7■■□□□ 12.3
LARP7Q4G0J3 ATP1A1-201ENST00000295598 3654 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.332e-14■■□□□ 12.3
LARP7Q4G0J3 PEG3-202ENST00000593695 4741 ntTSL 1 (best) BASIC12.84□□□□□ -0.353e-6■■□□□ 12.3
LARP7Q4G0J3 ZIM2-203ENST00000595671 2054 ntTSL 1 (best)12.38□□□□□ -0.433e-6■■□□□ 12.3
LARP7Q4G0J3 ATP1A1-211ENST00000537345 3763 ntAPPRIS ALT1 TSL 2 BASIC11.54□□□□□ -0.562e-14■■□□□ 12.3
LARP7Q4G0J3 ADGRG6-203ENST00000367608 6879 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.671e-7■■□□□ 12.3
LARP7Q4G0J3 ZIM2-207ENST00000601070 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.773e-6■■□□□ 12.3
LARP7Q4G0J3 ADGRG6-201ENST00000230173 7026 ntTSL 1 (best) BASIC9.8□□□□□ -0.841e-7■■□□□ 12.3
LARP7Q4G0J3 PEG3-201ENST00000326441 8723 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.883e-6■■□□□ 12.3
LARP7Q4G0J3 ZIM2-205ENST00000597281 2037 ntTSL 1 (best)8.93□□□□□ -0.983e-6■■□□□ 12.3
LARP7Q4G0J3 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC7.45□□□□□ -1.222e-14■■□□□ 12.3
LARP7Q4G0J3 ADGRG6-208ENST00000472054 1247 ntTSL 27.25□□□□□ -1.251e-7■■□□□ 12.3
LARP7Q4G0J3 RPS8-207ENST00000485390 1115 ntTSL 1 (best)20.59■□□□□ 0.892e-89■■□□□ 12.3
LARP7Q4G0J3 RPS8-204ENST00000470475 981 ntTSL 214.43□□□□□ -0.12e-89■■□□□ 12.3
LARP7Q4G0J3 RPS8-208ENST00000497035 694 ntTSL 314.05□□□□□ -0.162e-89■■□□□ 12.3
LARP7Q4G0J3 RPS8-202ENST00000396651 881 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.62e-89■■□□□ 12.3
LARP7Q4G0J3 RPS8-201ENST00000372209 685 ntTSL 2 BASIC10.33□□□□□ -0.762e-89■■□□□ 12.3
LARP7Q4G0J3 SNORD46-201ENST00000364043 104 ntBASIC7.38□□□□□ -1.232e-89■■□□□ 12.3
LARP7Q4G0J3 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC9.72□□□□□ -0.855e-19■■□□□ 12.3
LARP7Q4G0J3 RPL17-C18orf32-202ENST00000577910 1012 ntTSL 57.08□□□□□ -1.285e-19■■□□□ 12.3
LARP7Q4G0J3 RPL17-219ENST00000584364 523 ntTSL 24.7□□□□□ -1.665e-19■■□□□ 12.3
LARP7Q4G0J3 RPL17-214ENST00000582588 401 ntTSL 24.39□□□□□ -1.715e-19■■□□□ 12.3
LARP7Q4G0J3 SNORD58C-201ENST00000365223 64 ntBASIC2.76□□□□□ -1.975e-19■■□□□ 12.3
LARP7Q4G0J3 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.674e-17■■□□□ 12.2
LARP7Q4G0J3 RPL17-202ENST00000578532 684 ntTSL 218.54■□□□□ 0.564e-17■■□□□ 12.2
LARP7Q4G0J3 RPL17-218ENST00000583637 758 ntTSL 318.54■□□□□ 0.564e-17■■□□□ 12.2
LARP7Q4G0J3 RPL17-223ENST00000618613 856 ntAPPRIS P1 TSL 316.46■□□□□ 0.234e-17■■□□□ 12.2
LARP7Q4G0J3 RPL17-C18orf32-201ENST00000332968 948 ntTSL 5 BASIC11.66□□□□□ -0.544e-17■■□□□ 12.2
LARP7Q4G0J3 RPL17-224ENST00000618619 747 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.784e-17■■□□□ 12.2
LARP7Q4G0J3 RPL17-207ENST00000580210 705 ntTSL 2 BASIC9.5□□□□□ -0.894e-17■■□□□ 12.2
LARP7Q4G0J3 RPL17-205ENST00000579408 859 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.914e-17■■□□□ 12.2
LARP7Q4G0J3 RPL17-212ENST00000581373 584 ntTSL 2 BASIC8.46□□□□□ -1.064e-17■■□□□ 12.2
LARP7Q4G0J3 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.224e-17■■□□□ 12.2
LARP7Q4G0J3 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC27.23■■□□□ 1.951e-7■■□□□ 12.2
LARP7Q4G0J3 PTBP1-209ENST00000586481 578 ntTSL 319.28■□□□□ 0.683e-6■■□□□ 12.2
LARP7Q4G0J3 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.23■□□□□ 0.673e-6■■□□□ 12.2
LARP7Q4G0J3 SAMD1-203ENST00000541938 143 ntTSL 318.78■□□□□ 0.61e-7■■□□□ 12.2
LARP7Q4G0J3 SAMD1-201ENST00000269724 750 ntAPPRIS ALT2 TSL 518.5■□□□□ 0.551e-7■■□□□ 12.2
LARP7Q4G0J3 PTBP1-210ENST00000586944 4661 ntTSL 218.03■□□□□ 0.483e-6■■□□□ 12.2
LARP7Q4G0J3 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.193e-6■■□□□ 12.2
LARP7Q4G0J3 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.23■□□□□ 0.193e-6■■□□□ 12.2
LARP7Q4G0J3 SMIM1-202ENST00000452264 447 ntTSL 215.73■□□□□ 0.113e-26■■□□□ 12.2
LARP7Q4G0J3 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.13e-6■■□□□ 12.2
LARP7Q4G0J3 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC15.06■□□□□ 03e-6■■□□□ 12.2
LARP7Q4G0J3 PLEC-208ENST00000436759 14787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.31e-7■■□□□ 12.2
LARP7Q4G0J3 PLEC-202ENST00000345136 14803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.311e-7■■□□□ 12.2
LARP7Q4G0J3 PTBP1-214ENST00000589575 749 ntTSL 312.71□□□□□ -0.373e-6■■□□□ 12.2
LARP7Q4G0J3 PLEC-201ENST00000322810 15249 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.391e-7■■□□□ 12.2
LARP7Q4G0J3 PLEC-210ENST00000527096 13713 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.421e-7■■□□□ 12.2
LARP7Q4G0J3 PTBP1-216ENST00000590887 642 ntTSL 312.19□□□□□ -0.463e-6■■□□□ 12.2
Retrieved 100 of 2,094 protein–RNA pairs in 135.4 ms