RNA–Protein interactions for RNA: ENST00000579408.5

RPL17-205, Transcript of ribosomal protein L17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL17, Length 859 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL17-205ENST00000579408 NISCHQ9Y2I1 1504 aa23.62■■□□□ 1.37
RPL17-205ENST00000579408 AEBP2Q6ZN18 517 aaPredicted RBP21.01■□□□□ 0.95
RPL17-205ENST00000579408 CCDC180Q9P1Z9 1646 aa20.96■□□□□ 0.95
RPL17-205ENST00000579408 ABCC9O60706 1549 aa20.68■□□□□ 0.9
RPL17-205ENST00000579408 CHIC1Q5VXU3 224 aa19.95■□□□□ 0.78
RPL17-205ENST00000579408 RB1CC1Q8TDY2 1594 aa19.81■□□□□ 0.76
RPL17-205ENST00000579408 DCAF8L2P0C7V8 631 aa19.77■□□□□ 0.76
RPL17-205ENST00000579408 NACADO15069 1562 aa19.77■□□□□ 0.76
RPL17-205ENST00000579408 ZCCHC6Q5VYS8 1495 aaKnown RBP19.67■□□□□ 0.74
RPL17-205ENST00000579408 MYO15BQ96JP2 1530 aa19.65■□□□□ 0.74
RPL17-205ENST00000579408 DCAF1Q9Y4B6 1507 aa19.53■□□□□ 0.72
RPL17-205ENST00000579408 PABPN1Q86U42 306 aaKnown RBP eCLIP19.33■□□□□ 0.68
RPL17-205ENST00000579408 UNC13AQ9UPW8 1703 aa19.28■□□□□ 0.68
RPL17-205ENST00000579408 BICRAQ9NZM4 1560 aa19.24■□□□□ 0.67
RPL17-205ENST00000579408 SCRIBQ14160 1630 aa19.16■□□□□ 0.66
RPL17-205ENST00000579408 DNAJC5BQ9UF47 199 aa19.11■□□□□ 0.65
RPL17-205ENST00000579408 SHROOM4Q9ULL8 1493 aa19.03■□□□□ 0.64
RPL17-205ENST00000579408 EIF4G1Q04637 1599 aaKnown RBP18.74■□□□□ 0.59
RPL17-205ENST00000579408 CC2D2AQ9P2K1 1620 aa18.67■□□□□ 0.58
RPL17-205ENST00000579408 CECR2Q9BXF3 1484 aa18.58■□□□□ 0.57
RPL17-205ENST00000579408 SMARCA4P51532 1647 aa18.31■□□□□ 0.52
RPL17-205ENST00000579408 BAZ1AQ9NRL2 1556 aaPredicted RBP18.3■□□□□ 0.52
RPL17-205ENST00000579408 NCAPD3P42695 1498 aa18.29■□□□□ 0.52
RPL17-205ENST00000579408 ATAD2BQ9ULI0 1458 aa18.28■□□□□ 0.52
RPL17-205ENST00000579408 SMARCA2P51531 1590 aa18.21■□□□□ 0.51
RPL17-205ENST00000579408 MROH2BQ7Z745 1585 aa18.21■□□□□ 0.51
RPL17-205ENST00000579408 HMGXB3Q12766 1538 aa18.16■□□□□ 0.5
RPL17-205ENST00000579408 PEG3Q9GZU2 1588 aa18.16■□□□□ 0.5
RPL17-205ENST00000579408 BAZ1BQ9UIG0 1483 aaKnown RBP18.11■□□□□ 0.49
RPL17-205ENST00000579408 RSF1Q96T23 1441 aaPredicted RBP17.98■□□□□ 0.47
RPL17-205ENST00000579408 WIZO95785 1651 aa17.96■□□□□ 0.47
RPL17-205ENST00000579408 NESP48681 1621 aa17.87■□□□□ 0.45
RPL17-205ENST00000579408 SENP3Q9H4L4 574 aaPredicted RBP17.84■□□□□ 0.45
RPL17-205ENST00000579408 ERCC6Q03468 1493 aa17.81■□□□□ 0.44
RPL17-205ENST00000579408 TOP2AP11388 1531 aaKnown RBP17.79■□□□□ 0.44
RPL17-205ENST00000579408 LAMC3Q9Y6N6 1575 aa17.78■□□□□ 0.44
RPL17-205ENST00000579408 CADPSQ9ULU8 1353 aa17.75■□□□□ 0.43
RPL17-205ENST00000579408 PHF23Q9BUL5 403 aaPredicted RBP17.69■□□□□ 0.42
RPL17-205ENST00000579408 PDS5BQ9NTI5 1447 aa17.68■□□□□ 0.42
RPL17-205ENST00000579408 CUX2O14529 1486 aa17.66■□□□□ 0.42
RPL17-205ENST00000579408 CFTRP13569 1480 aa17.63■□□□□ 0.41
RPL17-205ENST00000579408 CCDC88BA6NC98 1476 aa17.6■□□□□ 0.41
RPL17-205ENST00000579408 THOC2Q8NI27 1593 aaKnown RBP17.59■□□□□ 0.41
RPL17-205ENST00000579408 KIF21AQ7Z4S6 1674 aa17.58■□□□□ 0.41
RPL17-205ENST00000579408 FANCD2Q9BXW9 1451 aa17.54■□□□□ 0.4
RPL17-205ENST00000579408 MRC2Q9UBG0 1479 aa17.51■□□□□ 0.39
RPL17-205ENST00000579408 CEP164Q9UPV0 1460 aa17.51■□□□□ 0.39
RPL17-205ENST00000579408 WDR62O43379 1518 aa17.45■□□□□ 0.38
RPL17-205ENST00000579408 SUPT5HO00267 1087 aaKnown RBP17.44■□□□□ 0.38
RPL17-205ENST00000579408 URB2Q14146 1524 aaKnown RBP17.37■□□□□ 0.37
RPL17-205ENST00000579408 PRDM2Q13029 1718 aa17.34■□□□□ 0.37
RPL17-205ENST00000579408 DNAJC5Q9H3Z4 198 aa17.25■□□□□ 0.35
RPL17-205ENST00000579408 TOPBP1Q92547 1522 aa17.24■□□□□ 0.35
RPL17-205ENST00000579408 ABCC8Q09428 1581 aa17.21■□□□□ 0.35
RPL17-205ENST00000579408 DNMBPQ6XZF7 1577 aa17.19■□□□□ 0.34
RPL17-205ENST00000579408 IFT140Q96RY7 1462 aa17.15■□□□□ 0.34
RPL17-205ENST00000579408 ZNF608Q9ULD9 1512 aaPredicted RBP17.11■□□□□ 0.33
RPL17-205ENST00000579408 POLA1P09884 1462 aaPredicted RBP17.1■□□□□ 0.33
RPL17-205ENST00000579408 CUX1P39880 1505 aa17.08■□□□□ 0.32
RPL17-205ENST00000579408 TARBP1Q13395 1621 aaKnown RBP17.04■□□□□ 0.32
RPL17-205ENST00000579408 FGD5Q6ZNL6 1462 aa17.04■□□□□ 0.32
RPL17-205ENST00000579408 RAD54L2Q9Y4B4 1467 aa17.03■□□□□ 0.32
RPL17-205ENST00000579408 SOGA1O94964 1423 aa17.03■□□□□ 0.32
RPL17-205ENST00000579408 AQRO60306 1485 aaKnown RBP eCLIP16.99■□□□□ 0.311e-9■■■■□ 21.2
RPL17-205ENST00000579408 EIF4G3O43432 1585 aaKnown RBP16.99■□□□□ 0.31
RPL17-205ENST00000579408 TDRD9Q8NDG6 1382 aaKnown RBP16.96■□□□□ 0.31
RPL17-205ENST00000579408 WRNQ14191 1432 aaPredicted RBP eCLIP16.95■□□□□ 0.35e-6■■■■■ 29.2
RPL17-205ENST00000579408 OSCARQ8IYS5 282 aa16.92■□□□□ 0.3
RPL17-205ENST00000579408 SYNJ1O43426 1573 aa16.89■□□□□ 0.29
RPL17-205ENST00000579408 TOP2BQ02880 1626 aa16.88■□□□□ 0.29
RPL17-205ENST00000579408 WDR97A6NE52 1622 aa16.88■□□□□ 0.29
RPL17-205ENST00000579408 ABCA10Q8WWZ4 1543 aa16.87■□□□□ 0.29
RPL17-205ENST00000579408 BIVM-ERCC5R4GMW8 1640 aa16.86■□□□□ 0.29
RPL17-205ENST00000579408 GRIN2BQ13224 1484 aa16.83■□□□□ 0.28
RPL17-205ENST00000579408 SNAPC4Q5SXM2 1469 aa16.83■□□□□ 0.28
RPL17-205ENST00000579408 GAPVD1Q14C86 1478 aa16.81■□□□□ 0.28
RPL17-205ENST00000579408 FBLN2P98095 1184 aa16.79■□□□□ 0.28
RPL17-205ENST00000579408 MAGI1Q96QZ7 1491 aaPredicted RBP16.79■□□□□ 0.28
RPL17-205ENST00000579408 ABCA5Q8WWZ7 1642 aa16.78■□□□□ 0.28
RPL17-205ENST00000579408 CHMP7Q8WUX9 453 aaPredicted RBP16.74■□□□□ 0.27
RPL17-205ENST00000579408 CHD1O14646 1710 aa16.73■□□□□ 0.27
RPL17-205ENST00000579408 SYNJ2O15056 1496 aa16.73■□□□□ 0.27
RPL17-205ENST00000579408 PBRM1Q86U86 1689 aa16.71■□□□□ 0.27
RPL17-205ENST00000579408 FOXD1Q16676 465 aa16.69■□□□□ 0.26
RPL17-205ENST00000579408 ARHGEF11O15085 1522 aa16.65■□□□□ 0.26
RPL17-205ENST00000579408 ERICH3Q5RHP9 1530 aa16.65■□□□□ 0.26
RPL17-205ENST00000579408 TRIM41Q8WV44 630 aa16.64■□□□□ 0.25
RPL17-205ENST00000579408 ADAMTS12P58397 1594 aa16.64■□□□□ 0.25
RPL17-205ENST00000579408 CLASP1Q7Z460 1538 aa16.63■□□□□ 0.25
RPL17-205ENST00000579408 RIMBP3CA6NJZ7 1639 aa16.63■□□□□ 0.25
RPL17-205ENST00000579408 RIMBP3BA6NNM3 1639 aa16.63■□□□□ 0.25
RPL17-205ENST00000579408 RIMBP3Q9UFD9 1639 aa16.63■□□□□ 0.25
RPL17-205ENST00000579408 FHAD1B1AJZ9 1412 aa16.62■□□□□ 0.25
RPL17-205ENST00000579408 GRIN2AQ12879 1464 aa16.61■□□□□ 0.25
RPL17-205ENST00000579408 KIF27Q86VH2 1401 aa16.59■□□□□ 0.25
RPL17-205ENST00000579408 NUP160Q12769 1436 aa16.56■□□□□ 0.24
RPL17-205ENST00000579408 IGF1RP08069 1367 aa16.56■□□□□ 0.24
RPL17-205ENST00000579408 CEP170Q5SW79 1584 aa16.53■□□□□ 0.24
RPL17-205ENST00000579408 ARAP1Q96P48 1450 aa16.52■□□□□ 0.23
RPL17-205ENST00000579408 CYB5RLQ6IPT4 315 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms