RNA–Protein interactions for RNA: ENST00000516201.1

SCARNA5-201, small Cajal body-specific RNA 5, humanhuman

BASIC

Gene SCARNA5, Length 276 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA5-201ENST00000516201 NISCHQ9Y2I1 1504 aa15.78■□□□□ 0.12
SCARNA5-201ENST00000516201 CCDC180Q9P1Z9 1646 aa13.99□□□□□ -0.17
SCARNA5-201ENST00000516201 ABCC9O60706 1549 aa13.29□□□□□ -0.28
SCARNA5-201ENST00000516201 ZCCHC6Q5VYS8 1495 aaKnown RBP13.23□□□□□ -0.29
SCARNA5-201ENST00000516201 DCAF1Q9Y4B6 1507 aa13.15□□□□□ -0.3
SCARNA5-201ENST00000516201 MYO15BQ96JP2 1530 aa13.13□□□□□ -0.31
SCARNA5-201ENST00000516201 NACADO15069 1562 aa13.07□□□□□ -0.32
SCARNA5-201ENST00000516201 RB1CC1Q8TDY2 1594 aa12.98□□□□□ -0.33
SCARNA5-201ENST00000516201 DCAF8L2P0C7V8 631 aa12.82□□□□□ -0.36
SCARNA5-201ENST00000516201 UNC13AQ9UPW8 1703 aa12.74□□□□□ -0.37
SCARNA5-201ENST00000516201 SCRIBQ14160 1630 aa12.66□□□□□ -0.38
SCARNA5-201ENST00000516201 BICRAQ9NZM4 1560 aa12.62□□□□□ -0.39
SCARNA5-201ENST00000516201 SHROOM4Q9ULL8 1493 aa12.58□□□□□ -0.4
SCARNA5-201ENST00000516201 PABPN1Q86U42 306 aaKnown RBP eCLIP12.41□□□□□ -0.42
SCARNA5-201ENST00000516201 EIF4G1Q04637 1599 aaKnown RBP12.23□□□□□ -0.45
SCARNA5-201ENST00000516201 CECR2Q9BXF3 1484 aa12.22□□□□□ -0.45
SCARNA5-201ENST00000516201 BAZ1AQ9NRL2 1556 aaPredicted RBP12.22□□□□□ -0.45
SCARNA5-201ENST00000516201 SMARCA4P51532 1647 aa12.2□□□□□ -0.46
SCARNA5-201ENST00000516201 MROH2BQ7Z745 1585 aa12.14□□□□□ -0.47
SCARNA5-201ENST00000516201 PEG3Q9GZU2 1588 aa12.14□□□□□ -0.47
SCARNA5-201ENST00000516201 CC2D2AQ9P2K1 1620 aa12.1□□□□□ -0.47
SCARNA5-201ENST00000516201 RSF1Q96T23 1441 aaPredicted RBP12.1□□□□□ -0.47
SCARNA5-201ENST00000516201 SMARCA2P51531 1590 aa12.07□□□□□ -0.48
SCARNA5-201ENST00000516201 ATAD2BQ9ULI0 1458 aa12.06□□□□□ -0.48
SCARNA5-201ENST00000516201 NCAPD3P42695 1498 aa12.04□□□□□ -0.48
SCARNA5-201ENST00000516201 HMGXB3Q12766 1538 aa12.03□□□□□ -0.48
SCARNA5-201ENST00000516201 WIZO95785 1651 aa12.01□□□□□ -0.49
SCARNA5-201ENST00000516201 DNAJC5BQ9UF47 199 aa11.98□□□□□ -0.49
SCARNA5-201ENST00000516201 TOP2AP11388 1531 aaKnown RBP11.95□□□□□ -0.5
SCARNA5-201ENST00000516201 BAZ1BQ9UIG0 1483 aaKnown RBP11.94□□□□□ -0.5
SCARNA5-201ENST00000516201 SUPT5HO00267 1087 aaKnown RBP11.79□□□□□ -0.52
SCARNA5-201ENST00000516201 CCDC88BA6NC98 1476 aa11.76□□□□□ -0.53
SCARNA5-201ENST00000516201 CFTRP13569 1480 aa11.68□□□□□ -0.54
SCARNA5-201ENST00000516201 LAMC3Q9Y6N6 1575 aa11.67□□□□□ -0.54
SCARNA5-201ENST00000516201 PRDM2Q13029 1718 aa11.67□□□□□ -0.54
SCARNA5-201ENST00000516201 CADPSQ9ULU8 1353 aa11.66□□□□□ -0.54
SCARNA5-201ENST00000516201 NESP48681 1621 aa11.6□□□□□ -0.55
SCARNA5-201ENST00000516201 PDS5BQ9NTI5 1447 aa11.54□□□□□ -0.56
SCARNA5-201ENST00000516201 KIF21AQ7Z4S6 1674 aa11.52□□□□□ -0.57
SCARNA5-201ENST00000516201 FANCD2Q9BXW9 1451 aa11.51□□□□□ -0.57
SCARNA5-201ENST00000516201 CEP164Q9UPV0 1460 aa11.48□□□□□ -0.57
SCARNA5-201ENST00000516201 THOC2Q8NI27 1593 aaKnown RBP11.45□□□□□ -0.58
SCARNA5-201ENST00000516201 WDR62O43379 1518 aa11.43□□□□□ -0.58
SCARNA5-201ENST00000516201 ERCC6Q03468 1493 aa11.43□□□□□ -0.58
SCARNA5-201ENST00000516201 MRC2Q9UBG0 1479 aa11.43□□□□□ -0.58
SCARNA5-201ENST00000516201 ABCC8Q09428 1581 aa11.41□□□□□ -0.58
SCARNA5-201ENST00000516201 DNMBPQ6XZF7 1577 aa11.41□□□□□ -0.58
SCARNA5-201ENST00000516201 URB2Q14146 1524 aaKnown RBP11.4□□□□□ -0.58
SCARNA5-201ENST00000516201 BIVM-ERCC5R4GMW8 1640 aa11.39□□□□□ -0.59
SCARNA5-201ENST00000516201 CUX1P39880 1505 aa11.39□□□□□ -0.59
SCARNA5-201ENST00000516201 TOPBP1Q92547 1522 aa11.38□□□□□ -0.59
SCARNA5-201ENST00000516201 TOP2BQ02880 1626 aa11.38□□□□□ -0.59
SCARNA5-201ENST00000516201 WRNQ14191 1432 aaPredicted RBP eCLIP11.37□□□□□ -0.59
SCARNA5-201ENST00000516201 SYNJ1O43426 1573 aa11.36□□□□□ -0.59
SCARNA5-201ENST00000516201 CUX2O14529 1486 aa11.32□□□□□ -0.6
SCARNA5-201ENST00000516201 POLA1P09884 1462 aaPredicted RBP11.3□□□□□ -0.6
SCARNA5-201ENST00000516201 FGD5Q6ZNL6 1462 aa11.29□□□□□ -0.6
SCARNA5-201ENST00000516201 WDR97A6NE52 1622 aa11.27□□□□□ -0.61
SCARNA5-201ENST00000516201 TARBP1Q13395 1621 aaKnown RBP11.27□□□□□ -0.61
SCARNA5-201ENST00000516201 IFT140Q96RY7 1462 aa11.25□□□□□ -0.61
SCARNA5-201ENST00000516201 CHIC1Q5VXU3 224 aa11.24□□□□□ -0.61
SCARNA5-201ENST00000516201 ABCA10Q8WWZ4 1543 aa11.24□□□□□ -0.61
SCARNA5-201ENST00000516201 SOGA1O94964 1423 aa11.2□□□□□ -0.62
SCARNA5-201ENST00000516201 RAD54L2Q9Y4B4 1467 aa11.19□□□□□ -0.62
SCARNA5-201ENST00000516201 ABCA5Q8WWZ7 1642 aa11.19□□□□□ -0.62
SCARNA5-201ENST00000516201 TRIM41Q8WV44 630 aa11.16□□□□□ -0.62
SCARNA5-201ENST00000516201 EIF4G3O43432 1585 aaKnown RBP11.15□□□□□ -0.62
SCARNA5-201ENST00000516201 ZNF608Q9ULD9 1512 aaPredicted RBP11.14□□□□□ -0.63
SCARNA5-201ENST00000516201 KIF27Q86VH2 1401 aa11.11□□□□□ -0.63
SCARNA5-201ENST00000516201 GAPVD1Q14C86 1478 aa11.11□□□□□ -0.63
SCARNA5-201ENST00000516201 PBRM1Q86U86 1689 aa11.11□□□□□ -0.63
SCARNA5-201ENST00000516201 EEA1Q15075 1411 aa11.1□□□□□ -0.63
SCARNA5-201ENST00000516201 ERICH3Q5RHP9 1530 aa11.1□□□□□ -0.63
SCARNA5-201ENST00000516201 GRIN2BQ13224 1484 aa11.09□□□□□ -0.63
SCARNA5-201ENST00000516201 TDRD9Q8NDG6 1382 aaKnown RBP11.09□□□□□ -0.63
SCARNA5-201ENST00000516201 AQRO60306 1485 aaKnown RBP eCLIP11.08□□□□□ -0.64
SCARNA5-201ENST00000516201 MAGI1Q96QZ7 1491 aaPredicted RBP11.06□□□□□ -0.64
SCARNA5-201ENST00000516201 RUSC2Q8N2Y8 1516 aa11.06□□□□□ -0.64
SCARNA5-201ENST00000516201 CUL7Q14999 1698 aa11.05□□□□□ -0.64
SCARNA5-201ENST00000516201 ADAMTS12P58397 1594 aa11.05□□□□□ -0.64
SCARNA5-201ENST00000516201 IGF1RP08069 1367 aa11.04□□□□□ -0.64
SCARNA5-201ENST00000516201 SNAPC4Q5SXM2 1469 aa11.02□□□□□ -0.65
SCARNA5-201ENST00000516201 PRXQ9BXM0 1461 aa11.02□□□□□ -0.65
SCARNA5-201ENST00000516201 FHAD1B1AJZ9 1412 aa11.01□□□□□ -0.65
SCARNA5-201ENST00000516201 SYNJ2O15056 1496 aa11□□□□□ -0.65
SCARNA5-201ENST00000516201 KIF21BO75037 1637 aa10.99□□□□□ -0.65
SCARNA5-201ENST00000516201 CHD1O14646 1710 aa10.96□□□□□ -0.65
SCARNA5-201ENST00000516201 CARMIL1Q5VZK9 1371 aa10.96□□□□□ -0.65
SCARNA5-201ENST00000516201 CSRNP3Q8WYN3 585 aa10.96□□□□□ -0.65
SCARNA5-201ENST00000516201 GRIN2AQ12879 1464 aa10.95□□□□□ -0.66
SCARNA5-201ENST00000516201 RAPGEF2Q9Y4G8 1499 aa10.95□□□□□ -0.66
SCARNA5-201ENST00000516201 NUP160Q12769 1436 aa10.93□□□□□ -0.66
SCARNA5-201ENST00000516201 GOLGA3Q08378 1498 aa10.89□□□□□ -0.67
SCARNA5-201ENST00000516201 CEP170Q5SW79 1584 aa10.89□□□□□ -0.67
SCARNA5-201ENST00000516201 CLASP1Q7Z460 1538 aa10.88□□□□□ -0.67
SCARNA5-201ENST00000516201 CTTNBP2Q8WZ74 1663 aa10.87□□□□□ -0.67
SCARNA5-201ENST00000516201 CHMP7Q8WUX9 453 aaPredicted RBP10.86□□□□□ -0.67
SCARNA5-201ENST00000516201 KIAA0586Q9BVV6 1533 aa10.85□□□□□ -0.67
SCARNA5-201ENST00000516201 FAM9AQ8IZU1 332 aaPredicted RBP10.85□□□□□ -0.67
SCARNA5-201ENST00000516201 SHROOM2Q13796 1616 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms