RNA–Protein interactions for RNA: ENST00000534001.1

APLP2-223, Transcript of amyloid beta precursor like protein 2, humanhuman

TSL 4

Gene APLP2, Length 585 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLP2-223ENST00000534001 NISCHQ9Y2I1 1504 aa52.74■■■■■ 6.03
APLP2-223ENST00000534001 CCDC180Q9P1Z9 1646 aa47.2■■■■■ 5.15
APLP2-223ENST00000534001 ABCC9O60706 1549 aa47.01■■■■■ 5.12
APLP2-223ENST00000534001 RB1CC1Q8TDY2 1594 aa44.78■■■■■ 4.76
APLP2-223ENST00000534001 NACADO15069 1562 aa44.56■■■■■ 4.72
APLP2-223ENST00000534001 DCAF8L2P0C7V8 631 aa44.17■■■■■ 4.66
APLP2-223ENST00000534001 MYO15BQ96JP2 1530 aa44.08■■■■■ 4.65
APLP2-223ENST00000534001 DNAJC5BQ9UF47 199 aa44.05■■■■■ 4.64
APLP2-223ENST00000534001 UNC13AQ9UPW8 1703 aa43.9■■■■■ 4.62
APLP2-223ENST00000534001 ZCCHC6Q5VYS8 1495 aaKnown RBP43.79■■■■■ 4.6
APLP2-223ENST00000534001 PABPN1Q86U42 306 aaKnown RBP eCLIP43.77■■■■■ 4.6
APLP2-223ENST00000534001 BICRAQ9NZM4 1560 aa43.66■■■■■ 4.58
APLP2-223ENST00000534001 DCAF1Q9Y4B6 1507 aa43.58■■■■■ 4.57
APLP2-223ENST00000534001 SCRIBQ14160 1630 aa43.03■■■■■ 4.48
APLP2-223ENST00000534001 SHROOM4Q9ULL8 1493 aa42.95■■■■■ 4.47
APLP2-223ENST00000534001 CC2D2AQ9P2K1 1620 aa42.49■■■■■ 4.39
APLP2-223ENST00000534001 EIF4G1Q04637 1599 aaKnown RBP42.48■■■■■ 4.39
APLP2-223ENST00000534001 CECR2Q9BXF3 1484 aa42.31■■■■■ 4.36
APLP2-223ENST00000534001 NCAPD3P42695 1498 aa41.18■■■■■ 4.18
APLP2-223ENST00000534001 SMARCA4P51532 1647 aa41.1■■■■■ 4.17
APLP2-223ENST00000534001 ATAD2BQ9ULI0 1458 aa41.09■■■■■ 4.17
APLP2-223ENST00000534001 SMARCA2P51531 1590 aa40.91■■■■■ 4.14
APLP2-223ENST00000534001 HMGXB3Q12766 1538 aa40.89■■■■■ 4.14
APLP2-223ENST00000534001 BAZ1AQ9NRL2 1556 aaPredicted RBP40.86■■■■■ 4.13
APLP2-223ENST00000534001 PEG3Q9GZU2 1588 aa40.74■■■■■ 4.11
APLP2-223ENST00000534001 MROH2BQ7Z745 1585 aa40.68■■■■■ 4.1
APLP2-223ENST00000534001 BAZ1BQ9UIG0 1483 aaKnown RBP40.63■■■■■ 4.09
APLP2-223ENST00000534001 NESP48681 1621 aa40.51■■■■■ 4.08
APLP2-223ENST00000534001 ERCC6Q03468 1493 aa40.45■■■■■ 4.07
APLP2-223ENST00000534001 CUX2O14529 1486 aa40.41■■■■■ 4.06
APLP2-223ENST00000534001 DNAJC5Q9H3Z4 198 aa40.17■■■■■ 4.02
APLP2-223ENST00000534001 LAMC3Q9Y6N6 1575 aa40.17■■■■■ 4.02
APLP2-223ENST00000534001 WIZO95785 1651 aa40.17■■■■■ 4.02
APLP2-223ENST00000534001 THOC2Q8NI27 1593 aaKnown RBP40.08■■■■■ 4.01
APLP2-223ENST00000534001 KIF21AQ7Z4S6 1674 aa39.96■■■■□ 3.99
APLP2-223ENST00000534001 CADPSQ9ULU8 1353 aa39.9■■■■□ 3.98
APLP2-223ENST00000534001 RSF1Q96T23 1441 aaPredicted RBP39.89■■■■□ 3.98
APLP2-223ENST00000534001 PDS5BQ9NTI5 1447 aa39.87■■■■□ 3.97
APLP2-223ENST00000534001 TOP2AP11388 1531 aaKnown RBP39.65■■■■□ 3.94
APLP2-223ENST00000534001 MRC2Q9UBG0 1479 aa39.58■■■■□ 3.93
APLP2-223ENST00000534001 WDR62O43379 1518 aa39.54■■■■□ 3.92
APLP2-223ENST00000534001 CFTRP13569 1480 aa39.53■■■■□ 3.92
APLP2-223ENST00000534001 FANCD2Q9BXW9 1451 aa39.44■■■■□ 3.9
APLP2-223ENST00000534001 CEP164Q9UPV0 1460 aa39.43■■■■□ 3.9
APLP2-223ENST00000534001 CCDC88BA6NC98 1476 aa39.22■■■■□ 3.87
APLP2-223ENST00000534001 URB2Q14146 1524 aaKnown RBP39.19■■■■□ 3.86
APLP2-223ENST00000534001 PRDM2Q13029 1718 aa39.11■■■■□ 3.85
APLP2-223ENST00000534001 TOPBP1Q92547 1522 aa38.75■■■■□ 3.79
APLP2-223ENST00000534001 ZNF608Q9ULD9 1512 aaPredicted RBP38.67■■■■□ 3.78
APLP2-223ENST00000534001 IFT140Q96RY7 1462 aa38.66■■■■□ 3.78
APLP2-223ENST00000534001 DNMBPQ6XZF7 1577 aa38.61■■■■□ 3.77
APLP2-223ENST00000534001 ABCC8Q09428 1581 aa38.56■■■■□ 3.76
APLP2-223ENST00000534001 OSCARQ8IYS5 282 aa38.5■■■■□ 3.75
APLP2-223ENST00000534001 TARBP1Q13395 1621 aaKnown RBP38.45■■■■□ 3.75
APLP2-223ENST00000534001 EIF4G3O43432 1585 aaKnown RBP38.43■■■■□ 3.74
APLP2-223ENST00000534001 POLA1P09884 1462 aaPredicted RBP38.39■■■■□ 3.74
APLP2-223ENST00000534001 TRIM41Q8WV44 630 aa38.37■■■■□ 3.73
APLP2-223ENST00000534001 AQRO60306 1485 aaKnown RBP eCLIP38.28■■■■□ 3.721e-8■■■■■ 32.3
APLP2-223ENST00000534001 RAD54L2Q9Y4B4 1467 aa38.24■■■■□ 3.71
APLP2-223ENST00000534001 CUX1P39880 1505 aa38.2■■■■□ 3.71
APLP2-223ENST00000534001 FGD5Q6ZNL6 1462 aa38.15■■■■□ 3.7
APLP2-223ENST00000534001 SOGA1O94964 1423 aa38.13■■■■□ 3.7
APLP2-223ENST00000534001 RIMBP3CA6NJZ7 1639 aa38.12■■■■□ 3.69
APLP2-223ENST00000534001 RIMBP3BA6NNM3 1639 aa38.12■■■■□ 3.69
APLP2-223ENST00000534001 RIMBP3Q9UFD9 1639 aa38.12■■■■□ 3.69
APLP2-223ENST00000534001 CHD1O14646 1710 aa38.09■■■■□ 3.69
APLP2-223ENST00000534001 SUPT5HO00267 1087 aaKnown RBP38.08■■■■□ 3.69
APLP2-223ENST00000534001 TDRD9Q8NDG6 1382 aaKnown RBP38.06■■■■□ 3.68
APLP2-223ENST00000534001 ARHGEF11O15085 1522 aa38.02■■■■□ 3.68
APLP2-223ENST00000534001 WDR97A6NE52 1622 aa37.97■■■■□ 3.67
APLP2-223ENST00000534001 SNAPC4Q5SXM2 1469 aa37.9■■■■□ 3.66
APLP2-223ENST00000534001 FBLN2P98095 1184 aa37.81■■■■□ 3.64
APLP2-223ENST00000534001 GRIN2BQ13224 1484 aa37.78■■■■□ 3.64
APLP2-223ENST00000534001 MAGI1Q96QZ7 1491 aaPredicted RBP37.77■■■■□ 3.64
APLP2-223ENST00000534001 ABCA10Q8WWZ4 1543 aa37.74■■■■□ 3.63
APLP2-223ENST00000534001 CLASP1Q7Z460 1538 aa37.72■■■■□ 3.63
APLP2-223ENST00000534001 ARAP1Q96P48 1450 aa37.71■■■■□ 3.63
APLP2-223ENST00000534001 ABCA5Q8WWZ7 1642 aa37.7■■■■□ 3.63
APLP2-223ENST00000534001 GAPVD1Q14C86 1478 aa37.68■■■■□ 3.62
APLP2-223ENST00000534001 PBRM1Q86U86 1689 aa37.68■■■■□ 3.62
APLP2-223ENST00000534001 SYNJ2O15056 1496 aa37.65■■■■□ 3.62
APLP2-223ENST00000534001 BIVM-ERCC5R4GMW8 1640 aa37.61■■■■□ 3.61
APLP2-223ENST00000534001 CYB5RLQ6IPT4 315 aa37.61■■■■□ 3.61
APLP2-223ENST00000534001 SYNJ1O43426 1573 aa37.6■■■■□ 3.61
APLP2-223ENST00000534001 TOP2BQ02880 1626 aa37.6■■■■□ 3.61
APLP2-223ENST00000534001 CHMP7Q8WUX9 453 aaPredicted RBP37.59■■■■□ 3.61
APLP2-223ENST00000534001 WRNQ14191 1432 aaPredicted RBP eCLIP37.54■■■■□ 3.61e-6■■■■■ 58.5
APLP2-223ENST00000534001 ADAMTS12P58397 1594 aa37.38■■■■□ 3.58
APLP2-223ENST00000534001 GRIN2AQ12879 1464 aa37.33■■■■□ 3.57
APLP2-223ENST00000534001 NUP160Q12769 1436 aa37.26■■■■□ 3.55
APLP2-223ENST00000534001 CEP170Q5SW79 1584 aa37.25■■■■□ 3.55
APLP2-223ENST00000534001 ERICH3Q5RHP9 1530 aa37.23■■■■□ 3.55
APLP2-223ENST00000534001 FHAD1B1AJZ9 1412 aa37.21■■■■□ 3.55
APLP2-223ENST00000534001 ERCC6L2Q5T890 1561 aa37.19■■■■□ 3.54
APLP2-223ENST00000534001 SHROOM2Q13796 1616 aa37.08■■■■□ 3.53
APLP2-223ENST00000534001 TRHP20396 242 aaPredicted RBP37.02■■■■□ 3.52
APLP2-223ENST00000534001 RUSC2Q8N2Y8 1516 aa36.86■■■■□ 3.49
APLP2-223ENST00000534001 IGF1RP08069 1367 aa36.84■■■■□ 3.49
APLP2-223ENST00000534001 PRG4Q92954 1404 aaPredicted RBP36.79■■■■□ 3.48
APLP2-223ENST00000534001 KIF27Q86VH2 1401 aa36.76■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms