RNA–Protein interactions for RNA: ENST00000295598.9

ATP1A1-201, Transcript of ATPase Na+/K+ transporting subunit alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATP1A1, Length 3,654 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1-201ENST00000295598 NISCHQ9Y2I1 1504 aa26.03■■□□□ 1.76
ATP1A1-201ENST00000295598 SHROOM4Q9ULL8 1493 aa23.28■■□□□ 1.32
ATP1A1-201ENST00000295598 DCAF8L2P0C7V8 631 aa22.87■■□□□ 1.25
ATP1A1-201ENST00000295598 SUPT5HO00267 1087 aaKnown RBP22.85■■□□□ 1.25
ATP1A1-201ENST00000295598 ZCCHC6Q5VYS8 1495 aaKnown RBP21.92■■□□□ 1.1
ATP1A1-201ENST00000295598 CHIC1Q5VXU3 224 aa21.76■■□□□ 1.07
ATP1A1-201ENST00000295598 MYO15BQ96JP2 1530 aa21.65■■□□□ 1.06
ATP1A1-201ENST00000295598 CCDC180Q9P1Z9 1646 aa21.6■■□□□ 1.05
ATP1A1-201ENST00000295598 LOC105371045A0A1W2PR82 267 aa21.54■■□□□ 1.04
ATP1A1-201ENST00000295598 EHMT2Q96KQ7 1210 aa21.52■■□□□ 1.04
ATP1A1-201ENST00000295598 PCGF6Q9BYE7 350 aa21.49■■□□□ 1.03
ATP1A1-201ENST00000295598 FAM9AQ8IZU1 332 aaPredicted RBP21.29■■□□□ 1
ATP1A1-201ENST00000295598 PPARGC1BQ86YN6 1023 aaKnown RBP21.21■□□□□ 0.99
ATP1A1-201ENST00000295598 ABCC9O60706 1549 aa21.07■□□□□ 0.96
ATP1A1-201ENST00000295598 HRCP23327 699 aa21.06■□□□□ 0.96
ATP1A1-201ENST00000295598 SCRIBQ14160 1630 aa21.06■□□□□ 0.96
ATP1A1-201ENST00000295598 TRIM41Q8WV44 630 aa20.96■□□□□ 0.95
ATP1A1-201ENST00000295598 DCAF1Q9Y4B6 1507 aa20.86■□□□□ 0.93
ATP1A1-201ENST00000295598 RSF1Q96T23 1441 aaPredicted RBP20.82■□□□□ 0.92
ATP1A1-201ENST00000295598 TTBK1Q5TCY1 1321 aaPredicted RBP20.72■□□□□ 0.91
ATP1A1-201ENST00000295598 CECR2Q9BXF3 1484 aa20.71■□□□□ 0.91
ATP1A1-201ENST00000295598 RB1CC1Q8TDY2 1594 aa20.63■□□□□ 0.89
ATP1A1-201ENST00000295598 TRIM26Q12899 539 aaPredicted RBP20.6■□□□□ 0.89
ATP1A1-201ENST00000295598 PABPN1Q86U42 306 aaKnown RBP eCLIP20.51■□□□□ 0.87
ATP1A1-201ENST00000295598 MROH2BQ7Z745 1585 aa20.47■□□□□ 0.87
ATP1A1-201ENST00000295598 WIZO95785 1651 aa20.34■□□□□ 0.85
ATP1A1-201ENST00000295598 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.25■□□□□ 0.83
ATP1A1-201ENST00000295598 RANGAP1P46060 587 aaPredicted RBP20.25■□□□□ 0.83
ATP1A1-201ENST00000295598 NACADO15069 1562 aa20.2■□□□□ 0.82
ATP1A1-201ENST00000295598 UBTFP17480 764 aaKnown RBP20.11■□□□□ 0.81
ATP1A1-201ENST00000295598 ABCC8Q09428 1581 aa20.1■□□□□ 0.81
ATP1A1-201ENST00000295598 CCER1Q8TC90 406 aaPredicted RBP20.06■□□□□ 0.8
ATP1A1-201ENST00000295598 CCDC88BA6NC98 1476 aa20.02■□□□□ 0.8
ATP1A1-201ENST00000295598 SOGA1O94964 1423 aa19.99■□□□□ 0.79
ATP1A1-201ENST00000295598 RUSC2Q8N2Y8 1516 aa19.93■□□□□ 0.78
ATP1A1-201ENST00000295598 BAZ1AQ9NRL2 1556 aaPredicted RBP19.9■□□□□ 0.78
ATP1A1-201ENST00000295598 ZEB1P37275 1124 aaPredicted RBP19.9■□□□□ 0.78
ATP1A1-201ENST00000295598 CSRNP3Q8WYN3 585 aa19.84■□□□□ 0.77
ATP1A1-201ENST00000295598 HNRNPUL2Q1KMD3 747 aaKnown RBP19.82■□□□□ 0.76
ATP1A1-201ENST00000295598 SMARCA4P51532 1647 aa19.77■□□□□ 0.76
ATP1A1-201ENST00000295598 CEP162Q5TB80 1403 aa19.74■□□□□ 0.75
ATP1A1-201ENST00000295598 SMARCA2P51531 1590 aa19.72■□□□□ 0.75
ATP1A1-201ENST00000295598 TOP2AP11388 1531 aaKnown RBP19.72■□□□□ 0.75
ATP1A1-201ENST00000295598 UNC13AQ9UPW8 1703 aa19.65■□□□□ 0.74
ATP1A1-201ENST00000295598 SCAF1Q9H7N4 1312 aaKnown RBP19.63■□□□□ 0.73
ATP1A1-201ENST00000295598 EIF4G1Q04637 1599 aaKnown RBP19.63■□□□□ 0.73
ATP1A1-201ENST00000295598 WRNQ14191 1432 aaPredicted RBP eCLIP19.59■□□□□ 0.73
ATP1A1-201ENST00000295598 YTHDC1Q96MU7 727 aaKnown RBP19.57■□□□□ 0.72
ATP1A1-201ENST00000295598 DIEXFQ68CQ4 756 aaKnown RBP19.55■□□□□ 0.72
ATP1A1-201ENST00000295598 BICRAQ9NZM4 1560 aa19.54■□□□□ 0.72
ATP1A1-201ENST00000295598 TNIKQ9UKE5 1360 aa19.52■□□□□ 0.72
ATP1A1-201ENST00000295598 APLP2Q06481 763 aa19.52■□□□□ 0.72
ATP1A1-201ENST00000295598 NEUROD1Q13562 356 aa19.47■□□□□ 0.71
ATP1A1-201ENST00000295598 ITGAEP38570 1179 aa19.47■□□□□ 0.71
ATP1A1-201ENST00000295598 BAZ1BQ9UIG0 1483 aaKnown RBP19.43■□□□□ 0.7
ATP1A1-201ENST00000295598 ATAD2BQ9ULI0 1458 aa19.42■□□□□ 0.7
ATP1A1-201ENST00000295598 SYNJ1O43426 1573 aa19.41■□□□□ 0.7
ATP1A1-201ENST00000295598 GOLGA3Q08378 1498 aa19.41■□□□□ 0.7
ATP1A1-201ENST00000295598 CLIP1P30622 1438 aa19.4■□□□□ 0.7
ATP1A1-201ENST00000295598 RAPGEF2Q9Y4G8 1499 aa19.38■□□□□ 0.69
ATP1A1-201ENST00000295598 ATP1B4Q9UN42 357 aaPredicted RBP19.32■□□□□ 0.68
ATP1A1-201ENST00000295598 KANK4Q5T7N3 995 aaPredicted RBP19.3■□□□□ 0.68
ATP1A1-201ENST00000295598 GTF3C3Q9Y5Q9 886 aa19.3■□□□□ 0.68
ATP1A1-201ENST00000295598 ACIN1Q9UKV3 1341 aaKnown RBP19.28■□□□□ 0.68
ATP1A1-201ENST00000295598 P3H3Q8IVL6 736 aa19.27■□□□□ 0.68
ATP1A1-201ENST00000295598 EEA1Q15075 1411 aa19.26■□□□□ 0.67
ATP1A1-201ENST00000295598 ZNF316A6NFI3 1004 aaPredicted RBP19.26■□□□□ 0.67
ATP1A1-201ENST00000295598 CEP164Q9UPV0 1460 aa19.25■□□□□ 0.67
ATP1A1-201ENST00000295598 MIER1Q8N108 512 aa19.23■□□□□ 0.67
ATP1A1-201ENST00000295598 VPS8Q8N3P4 1428 aa19.14■□□□□ 0.65
ATP1A1-201ENST00000295598 CENPBP07199 599 aaPredicted RBP19.11■□□□□ 0.65
ATP1A1-201ENST00000295598 KIF21BO75037 1637 aa19.06■□□□□ 0.64
ATP1A1-201ENST00000295598 PEG3Q9GZU2 1588 aa19.05■□□□□ 0.64
ATP1A1-201ENST00000295598 FAM50AQ14320 339 aaKnown RBP18.99■□□□□ 0.63
ATP1A1-201ENST00000295598 CUX1P39880 1505 aa18.98■□□□□ 0.63
ATP1A1-201ENST00000295598 ARAP1Q96P48 1450 aa18.98■□□□□ 0.63
ATP1A1-201ENST00000295598 HIRIP3Q9BW71 556 aaPredicted RBP18.95■□□□□ 0.62
ATP1A1-201ENST00000295598 KIF27Q86VH2 1401 aa18.93■□□□□ 0.62
ATP1A1-201ENST00000295598 TOP2BQ02880 1626 aa18.93■□□□□ 0.62
ATP1A1-201ENST00000295598 CUX2O14529 1486 aa18.92■□□□□ 0.62
ATP1A1-201ENST00000295598 DNAJC5BQ9UF47 199 aa18.92■□□□□ 0.62
ATP1A1-201ENST00000295598 ARID3CA6NKF2 412 aa18.89■□□□□ 0.62
ATP1A1-201ENST00000295598 PRXQ9BXM0 1461 aa18.88■□□□□ 0.61
ATP1A1-201ENST00000295598 NCAPD3P42695 1498 aa18.87■□□□□ 0.61
ATP1A1-201ENST00000295598 SIN3AQ96ST3 1273 aa18.86■□□□□ 0.61
ATP1A1-201ENST00000295598 DHX57Q6P158 1386 aaKnown RBP18.86■□□□□ 0.61
ATP1A1-201ENST00000295598 KCNH8Q96L42 1107 aa18.83■□□□□ 0.61
ATP1A1-201ENST00000295598 IGF1RP08069 1367 aa18.83■□□□□ 0.6
ATP1A1-201ENST00000295598 ARHGAP35Q9NRY4 1499 aa18.8■□□□□ 0.6
ATP1A1-201ENST00000295598 CARMIL1Q5VZK9 1371 aa18.8■□□□□ 0.6
ATP1A1-201ENST00000295598 CFTRP13569 1480 aa18.79■□□□□ 0.6
ATP1A1-201ENST00000295598 CCNB3Q8WWL7 1395 aa18.77■□□□□ 0.6
ATP1A1-201ENST00000295598 RAD54L2Q9Y4B4 1467 aa18.76■□□□□ 0.59
ATP1A1-201ENST00000295598 CADPSQ9ULU8 1353 aa18.75■□□□□ 0.59
ATP1A1-201ENST00000295598 NESP48681 1621 aa18.74■□□□□ 0.59
ATP1A1-201ENST00000295598 FGD5Q6ZNL6 1462 aa18.72■□□□□ 0.59
ATP1A1-201ENST00000295598 BIVM-ERCC5R4GMW8 1640 aa18.71■□□□□ 0.59
ATP1A1-201ENST00000295598 RAB3GAP2Q9H2M9 1393 aa18.7■□□□□ 0.58
ATP1A1-201ENST00000295598 DDX10Q13206 875 aaKnown RBP18.7■□□□□ 0.58
ATP1A1-201ENST00000295598 FHOD3Q2V2M9 1422 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms