RNA–Protein interactions for RNA: ENST00000269724.5

SAMD1-201, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene SAMD1, Length 750 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-201ENST00000269724 NISCHQ9Y2I1 1504 aa46.39■■■■■ 5.02
SAMD1-201ENST00000269724 CCDC180Q9P1Z9 1646 aa41.26■■■■■ 4.2
SAMD1-201ENST00000269724 ABCC9O60706 1549 aa40.1■■■■■ 4.01
SAMD1-201ENST00000269724 NACADO15069 1562 aa38.75■■■■□ 3.79
SAMD1-201ENST00000269724 RB1CC1Q8TDY2 1594 aa38.74■■■■□ 3.79
SAMD1-201ENST00000269724 ZCCHC6Q5VYS8 1495 aaKnown RBP38.67■■■■□ 3.78
SAMD1-201ENST00000269724 MYO15BQ96JP2 1530 aa38.63■■■■□ 3.77
SAMD1-201ENST00000269724 DCAF8L2P0C7V8 631 aa38.57■■■■□ 3.76
SAMD1-201ENST00000269724 DCAF1Q9Y4B6 1507 aa38.48■■■■□ 3.75
SAMD1-201ENST00000269724 UNC13AQ9UPW8 1703 aa37.83■■■■□ 3.65
SAMD1-201ENST00000269724 SCRIBQ14160 1630 aa37.53■■■■□ 3.6
SAMD1-201ENST00000269724 BICRAQ9NZM4 1560 aa37.52■■■■□ 3.6
SAMD1-201ENST00000269724 PABPN1Q86U42 306 aaKnown RBP eCLIP37.45■■■■□ 3.59
SAMD1-201ENST00000269724 SHROOM4Q9ULL8 1493 aa37.27■■■■□ 3.56
SAMD1-201ENST00000269724 DNAJC5BQ9UF47 199 aa36.67■■■■□ 3.46
SAMD1-201ENST00000269724 EIF4G1Q04637 1599 aaKnown RBP36.53■■■■□ 3.44
SAMD1-201ENST00000269724 CC2D2AQ9P2K1 1620 aa36.34■■■■□ 3.41
SAMD1-201ENST00000269724 CECR2Q9BXF3 1484 aa36.06■■■■□ 3.36
SAMD1-201ENST00000269724 BAZ1AQ9NRL2 1556 aaPredicted RBP35.98■■■■□ 3.35
SAMD1-201ENST00000269724 SMARCA4P51532 1647 aa35.97■■■■□ 3.35
SAMD1-201ENST00000269724 SMARCA2P51531 1590 aa35.75■■■■□ 3.31
SAMD1-201ENST00000269724 NCAPD3P42695 1498 aa35.74■■■■□ 3.31
SAMD1-201ENST00000269724 ATAD2BQ9ULI0 1458 aa35.73■■■■□ 3.31
SAMD1-201ENST00000269724 MROH2BQ7Z745 1585 aa35.71■■■■□ 3.31
SAMD1-201ENST00000269724 PEG3Q9GZU2 1588 aa35.68■■■■□ 3.3
SAMD1-201ENST00000269724 HMGXB3Q12766 1538 aa35.58■■■■□ 3.29
SAMD1-201ENST00000269724 BAZ1BQ9UIG0 1483 aaKnown RBP35.44■■■■□ 3.26
SAMD1-201ENST00000269724 RSF1Q96T23 1441 aaPredicted RBP35.36■■■■□ 3.25
SAMD1-201ENST00000269724 WIZO95785 1651 aa35.33■■■■□ 3.25
SAMD1-201ENST00000269724 TOP2AP11388 1531 aaKnown RBP35.01■■■■□ 3.2
SAMD1-201ENST00000269724 LAMC3Q9Y6N6 1575 aa34.79■■■■□ 3.16
SAMD1-201ENST00000269724 NESP48681 1621 aa34.73■■■■□ 3.15
SAMD1-201ENST00000269724 CADPSQ9ULU8 1353 aa34.67■■■■□ 3.14
SAMD1-201ENST00000269724 ERCC6Q03468 1493 aa34.59■■■■□ 3.13
SAMD1-201ENST00000269724 CCDC88BA6NC98 1476 aa34.56■■■■□ 3.12
SAMD1-201ENST00000269724 PDS5BQ9NTI5 1447 aa34.54■■■■□ 3.12
SAMD1-201ENST00000269724 CFTRP13569 1480 aa34.51■■■■□ 3.11
SAMD1-201ENST00000269724 SUPT5HO00267 1087 aaKnown RBP34.45■■■■□ 3.11
SAMD1-201ENST00000269724 KIF21AQ7Z4S6 1674 aa34.38■■■■□ 3.09
SAMD1-201ENST00000269724 PRDM2Q13029 1718 aa34.3■■■■□ 3.08
SAMD1-201ENST00000269724 CUX2O14529 1486 aa34.26■■■■□ 3.07
SAMD1-201ENST00000269724 FANCD2Q9BXW9 1451 aa34.26■■■■□ 3.07
SAMD1-201ENST00000269724 THOC2Q8NI27 1593 aaKnown RBP34.25■■■■□ 3.07
SAMD1-201ENST00000269724 CEP164Q9UPV0 1460 aa34.21■■■■□ 3.07
SAMD1-201ENST00000269724 MRC2Q9UBG0 1479 aa34.14■■■■□ 3.06
SAMD1-201ENST00000269724 WDR62O43379 1518 aa34.04■■■■□ 3.04
SAMD1-201ENST00000269724 URB2Q14146 1524 aaKnown RBP33.89■■■■□ 3.02
SAMD1-201ENST00000269724 ABCC8Q09428 1581 aa33.82■■■■□ 3
SAMD1-201ENST00000269724 TOPBP1Q92547 1522 aa33.73■■■□□ 2.99
SAMD1-201ENST00000269724 DNMBPQ6XZF7 1577 aa33.72■■■□□ 2.99
SAMD1-201ENST00000269724 IFT140Q96RY7 1462 aa33.51■■■□□ 2.96
SAMD1-201ENST00000269724 CUX1P39880 1505 aa33.5■■■□□ 2.95
SAMD1-201ENST00000269724 POLA1P09884 1462 aaPredicted RBP33.44■■■□□ 2.94
SAMD1-201ENST00000269724 TARBP1Q13395 1621 aaKnown RBP33.37■■■□□ 2.93
SAMD1-201ENST00000269724 FGD5Q6ZNL6 1462 aa33.37■■■□□ 2.93
SAMD1-201ENST00000269724 WRNQ14191 1432 aaPredicted RBP eCLIP33.35■■■□□ 2.934e-8■■■□□ 18.1
SAMD1-201ENST00000269724 SOGA1O94964 1423 aa33.31■■■□□ 2.92
SAMD1-201ENST00000269724 TOP2BQ02880 1626 aa33.29■■■□□ 2.92
SAMD1-201ENST00000269724 BIVM-ERCC5R4GMW8 1640 aa33.29■■■□□ 2.92
SAMD1-201ENST00000269724 ZNF608Q9ULD9 1512 aaPredicted RBP33.28■■■□□ 2.92
SAMD1-201ENST00000269724 RAD54L2Q9Y4B4 1467 aa33.24■■■□□ 2.91
SAMD1-201ENST00000269724 SYNJ1O43426 1573 aa33.23■■■□□ 2.91
SAMD1-201ENST00000269724 WDR97A6NE52 1622 aa33.21■■■□□ 2.91
SAMD1-201ENST00000269724 EIF4G3O43432 1585 aaKnown RBP33.2■■■□□ 2.91
SAMD1-201ENST00000269724 AQRO60306 1485 aaKnown RBP eCLIP33.11■■■□□ 2.89
SAMD1-201ENST00000269724 ABCA10Q8WWZ4 1543 aa33.1■■■□□ 2.89
SAMD1-201ENST00000269724 TDRD9Q8NDG6 1382 aaKnown RBP33.06■■■□□ 2.88
SAMD1-201ENST00000269724 DNAJC5Q9H3Z4 198 aa33.02■■■□□ 2.88
SAMD1-201ENST00000269724 ABCA5Q8WWZ7 1642 aa32.95■■■□□ 2.86
SAMD1-201ENST00000269724 GRIN2BQ13224 1484 aa32.93■■■□□ 2.86
SAMD1-201ENST00000269724 GAPVD1Q14C86 1478 aa32.93■■■□□ 2.86
SAMD1-201ENST00000269724 PBRM1Q86U86 1689 aa32.86■■■□□ 2.85
SAMD1-201ENST00000269724 MAGI1Q96QZ7 1491 aaPredicted RBP32.86■■■□□ 2.85
SAMD1-201ENST00000269724 SNAPC4Q5SXM2 1469 aa32.82■■■□□ 2.84
SAMD1-201ENST00000269724 OSCARQ8IYS5 282 aa32.82■■■□□ 2.84
SAMD1-201ENST00000269724 CHD1O14646 1710 aa32.75■■■□□ 2.83
SAMD1-201ENST00000269724 ERICH3Q5RHP9 1530 aa32.73■■■□□ 2.83
SAMD1-201ENST00000269724 SYNJ2O15056 1496 aa32.71■■■□□ 2.83
SAMD1-201ENST00000269724 KIF27Q86VH2 1401 aa32.67■■■□□ 2.82
SAMD1-201ENST00000269724 FBLN2P98095 1184 aa32.65■■■□□ 2.82
SAMD1-201ENST00000269724 CHMP7Q8WUX9 453 aaPredicted RBP32.65■■■□□ 2.82
SAMD1-201ENST00000269724 TRIM41Q8WV44 630 aa32.61■■■□□ 2.81
SAMD1-201ENST00000269724 ADAMTS12P58397 1594 aa32.61■■■□□ 2.81
SAMD1-201ENST00000269724 FHAD1B1AJZ9 1412 aa32.58■■■□□ 2.81
SAMD1-201ENST00000269724 GRIN2AQ12879 1464 aa32.49■■■□□ 2.79
SAMD1-201ENST00000269724 IGF1RP08069 1367 aa32.49■■■□□ 2.79
SAMD1-201ENST00000269724 CUL7Q14999 1698 aa32.46■■■□□ 2.79
SAMD1-201ENST00000269724 CLASP1Q7Z460 1538 aa32.42■■■□□ 2.78
SAMD1-201ENST00000269724 NUP160Q12769 1436 aa32.36■■■□□ 2.77
SAMD1-201ENST00000269724 CEP170Q5SW79 1584 aa32.31■■■□□ 2.76
SAMD1-201ENST00000269724 RUSC2Q8N2Y8 1516 aa32.3■■■□□ 2.76
SAMD1-201ENST00000269724 CARMIL1Q5VZK9 1371 aa32.3■■■□□ 2.76
SAMD1-201ENST00000269724 ARHGEF11O15085 1522 aa32.27■■■□□ 2.76
SAMD1-201ENST00000269724 CHIC1Q5VXU3 224 aa32.27■■■□□ 2.76
SAMD1-201ENST00000269724 RIMBP3CA6NJZ7 1639 aa32.26■■■□□ 2.76
SAMD1-201ENST00000269724 RIMBP3BA6NNM3 1639 aa32.26■■■□□ 2.76
SAMD1-201ENST00000269724 RIMBP3Q9UFD9 1639 aa32.26■■■□□ 2.76
SAMD1-201ENST00000269724 EEA1Q15075 1411 aa32.17■■■□□ 2.74
SAMD1-201ENST00000269724 RAPGEF2Q9Y4G8 1499 aa32.14■■■□□ 2.74
SAMD1-201ENST00000269724 SHROOM2Q13796 1616 aa32.12■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms