RNA–Protein interactions for RNA: ENST00000452264.1

SMIM1-202, Transcript of small integral membrane protein 1 (Vel blood group), humanhuman

TSL 2

Gene SMIM1, Length 447 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM1-202ENST00000452264 NISCHQ9Y2I1 1504 aa40.98■■■■■ 4.15
SMIM1-202ENST00000452264 ABCC9O60706 1549 aa37.89■■■■□ 3.66
SMIM1-202ENST00000452264 CCDC180Q9P1Z9 1646 aa37.12■■■■□ 3.53
SMIM1-202ENST00000452264 DNAJC5BQ9UF47 199 aa36.24■■■■□ 3.39
SMIM1-202ENST00000452264 RB1CC1Q8TDY2 1594 aa35.71■■■■□ 3.31
SMIM1-202ENST00000452264 NACADO15069 1562 aa35.27■■■■□ 3.24
SMIM1-202ENST00000452264 PABPN1Q86U42 306 aaKnown RBP eCLIP35.15■■■■□ 3.22
SMIM1-202ENST00000452264 UNC13AQ9UPW8 1703 aa34.95■■■■□ 3.19
SMIM1-202ENST00000452264 DCAF8L2P0C7V8 631 aa34.92■■■■□ 3.18
SMIM1-202ENST00000452264 BICRAQ9NZM4 1560 aa34.71■■■■□ 3.15
SMIM1-202ENST00000452264 MYO15BQ96JP2 1530 aa34.51■■■■□ 3.12
SMIM1-202ENST00000452264 CECR2Q9BXF3 1484 aa34.21■■■■□ 3.07
SMIM1-202ENST00000452264 CC2D2AQ9P2K1 1620 aa34.19■■■■□ 3.06
SMIM1-202ENST00000452264 SHROOM4Q9ULL8 1493 aa34.13■■■■□ 3.05
SMIM1-202ENST00000452264 EIF4G1Q04637 1599 aaKnown RBP33.92■■■■□ 3.02
SMIM1-202ENST00000452264 DNAJC5Q9H3Z4 198 aa33.84■■■■□ 3.01
SMIM1-202ENST00000452264 ZCCHC6Q5VYS8 1495 aaKnown RBP33.79■■■■□ 3
SMIM1-202ENST00000452264 DCAF1Q9Y4B6 1507 aa33.79■■■■□ 3
SMIM1-202ENST00000452264 SCRIBQ14160 1630 aa33.78■■■■□ 3
SMIM1-202ENST00000452264 CUX2O14529 1486 aa32.96■■■□□ 2.87
SMIM1-202ENST00000452264 ERCC6Q03468 1493 aa32.76■■■□□ 2.84
SMIM1-202ENST00000452264 NCAPD3P42695 1498 aa32.57■■■□□ 2.8
SMIM1-202ENST00000452264 ATAD2BQ9ULI0 1458 aa32.37■■■□□ 2.77
SMIM1-202ENST00000452264 NESP48681 1621 aa32.33■■■□□ 2.77
SMIM1-202ENST00000452264 HMGXB3Q12766 1538 aa32.26■■■□□ 2.75
SMIM1-202ENST00000452264 SMARCA2P51531 1590 aa32.23■■■□□ 2.75
SMIM1-202ENST00000452264 THOC2Q8NI27 1593 aaKnown RBP32.16■■■□□ 2.74
SMIM1-202ENST00000452264 SMARCA4P51532 1647 aa32.15■■■□□ 2.74
SMIM1-202ENST00000452264 TRIM41Q8WV44 630 aa32.05■■■□□ 2.72
SMIM1-202ENST00000452264 BAZ1BQ9UIG0 1483 aaKnown RBP32.01■■■□□ 2.71
SMIM1-202ENST00000452264 LAMC3Q9Y6N6 1575 aa31.96■■■□□ 2.71
SMIM1-202ENST00000452264 KIF21AQ7Z4S6 1674 aa31.9■■■□□ 2.7
SMIM1-202ENST00000452264 BAZ1AQ9NRL2 1556 aaPredicted RBP31.85■■■□□ 2.69
SMIM1-202ENST00000452264 PEG3Q9GZU2 1588 aa31.83■■■□□ 2.69
SMIM1-202ENST00000452264 PDS5BQ9NTI5 1447 aa31.8■■■□□ 2.68
SMIM1-202ENST00000452264 MRC2Q9UBG0 1479 aa31.58■■■□□ 2.65
SMIM1-202ENST00000452264 MROH2BQ7Z745 1585 aa31.57■■■□□ 2.64
SMIM1-202ENST00000452264 CADPSQ9ULU8 1353 aa31.54■■■□□ 2.64
SMIM1-202ENST00000452264 WDR62O43379 1518 aa31.54■■■□□ 2.64
SMIM1-202ENST00000452264 OSCARQ8IYS5 282 aa31.32■■■□□ 2.6
SMIM1-202ENST00000452264 CEP164Q9UPV0 1460 aa31.29■■■□□ 2.6
SMIM1-202ENST00000452264 FANCD2Q9BXW9 1451 aa31.19■■■□□ 2.58
SMIM1-202ENST00000452264 WIZO95785 1651 aa31.16■■■□□ 2.58
SMIM1-202ENST00000452264 RIMBP3CA6NJZ7 1639 aa31.03■■■□□ 2.56
SMIM1-202ENST00000452264 RIMBP3BA6NNM3 1639 aa31.03■■■□□ 2.56
SMIM1-202ENST00000452264 RIMBP3Q9UFD9 1639 aa31.03■■■□□ 2.56
SMIM1-202ENST00000452264 CFTRP13569 1480 aa31.01■■■□□ 2.56
SMIM1-202ENST00000452264 URB2Q14146 1524 aaKnown RBP30.99■■■□□ 2.55
SMIM1-202ENST00000452264 ARHGEF11O15085 1522 aa30.84■■■□□ 2.53
SMIM1-202ENST00000452264 ZNF608Q9ULD9 1512 aaPredicted RBP30.74■■■□□ 2.51
SMIM1-202ENST00000452264 TOP2AP11388 1531 aaKnown RBP30.7■■■□□ 2.51
SMIM1-202ENST00000452264 IFT140Q96RY7 1462 aa30.7■■■□□ 2.5
SMIM1-202ENST00000452264 PRDM2Q13029 1718 aa30.69■■■□□ 2.5
SMIM1-202ENST00000452264 CYB5RLQ6IPT4 315 aa30.66■■■□□ 2.5
SMIM1-202ENST00000452264 RSF1Q96T23 1441 aaPredicted RBP30.62■■■□□ 2.49
SMIM1-202ENST00000452264 TRHP20396 242 aaPredicted RBP30.56■■■□□ 2.48
SMIM1-202ENST00000452264 EIF4G3O43432 1585 aaKnown RBP30.54■■■□□ 2.48
SMIM1-202ENST00000452264 TOPBP1Q92547 1522 aa30.52■■■□□ 2.48
SMIM1-202ENST00000452264 ARAP1Q96P48 1450 aa30.49■■■□□ 2.47
SMIM1-202ENST00000452264 CHD1O14646 1710 aa30.48■■■□□ 2.47
SMIM1-202ENST00000452264 ABCC8Q09428 1581 aa30.38■■■□□ 2.45
SMIM1-202ENST00000452264 CCDC88BA6NC98 1476 aa30.37■■■□□ 2.45
SMIM1-202ENST00000452264 AQRO60306 1485 aaKnown RBP eCLIP30.37■■■□□ 2.455e-7■■■■■ 28.4
SMIM1-202ENST00000452264 DNMBPQ6XZF7 1577 aa30.34■■■□□ 2.45
SMIM1-202ENST00000452264 TARBP1Q13395 1621 aaKnown RBP30.32■■■□□ 2.44
SMIM1-202ENST00000452264 FBLN2P98095 1184 aa30.31■■■□□ 2.44
SMIM1-202ENST00000452264 AEBP2Q6ZN18 517 aaPredicted RBP30.25■■■□□ 2.43
SMIM1-202ENST00000452264 POLA1P09884 1462 aaPredicted RBP30.16■■■□□ 2.42
SMIM1-202ENST00000452264 CLASP1Q7Z460 1538 aa30.09■■■□□ 2.41
SMIM1-202ENST00000452264 RAD54L2Q9Y4B4 1467 aa30.07■■■□□ 2.4
SMIM1-202ENST00000452264 TDRD9Q8NDG6 1382 aaKnown RBP30.04■■■□□ 2.4
SMIM1-202ENST00000452264 SNAPC4Q5SXM2 1469 aa30.03■■■□□ 2.4
SMIM1-202ENST00000452264 SYNJ1O43426 1573 aa29.99■■■□□ 2.39
SMIM1-202ENST00000452264 SOGA1O94964 1423 aa29.99■■■□□ 2.39
SMIM1-202ENST00000452264 CHMP7Q8WUX9 453 aaPredicted RBP29.95■■■□□ 2.39
SMIM1-202ENST00000452264 WDR97A6NE52 1622 aa29.93■■■□□ 2.38
SMIM1-202ENST00000452264 MAGI1Q96QZ7 1491 aaPredicted RBP29.91■■■□□ 2.38
SMIM1-202ENST00000452264 FGD5Q6ZNL6 1462 aa29.86■■■□□ 2.37
SMIM1-202ENST00000452264 SYNJ2O15056 1496 aa29.82■■■□□ 2.36
SMIM1-202ENST00000452264 GRIN2BQ13224 1484 aa29.82■■■□□ 2.36
SMIM1-202ENST00000452264 GAPVD1Q14C86 1478 aa29.82■■■□□ 2.36
SMIM1-202ENST00000452264 CUX1P39880 1505 aa29.71■■■□□ 2.35
SMIM1-202ENST00000452264 PBRM1Q86U86 1689 aa29.69■■■□□ 2.34
SMIM1-202ENST00000452264 ERCC6L2Q5T890 1561 aa29.58■■■□□ 2.33
SMIM1-202ENST00000452264 ABCA5Q8WWZ7 1642 aa29.51■■■□□ 2.31
SMIM1-202ENST00000452264 ABCA10Q8WWZ4 1543 aa29.47■■■□□ 2.31
SMIM1-202ENST00000452264 CEP170Q5SW79 1584 aa29.45■■■□□ 2.31
SMIM1-202ENST00000452264 GRIN2AQ12879 1464 aa29.44■■■□□ 2.3
SMIM1-202ENST00000452264 KIF13AQ9H1H9 1805 aa29.43■■■□□ 2.3
SMIM1-202ENST00000452264 NUP160Q12769 1436 aa29.38■■■□□ 2.29
SMIM1-202ENST00000452264 SHROOM2Q13796 1616 aa29.35■■■□□ 2.29
SMIM1-202ENST00000452264 ADAMTS12P58397 1594 aa29.35■■■□□ 2.29
SMIM1-202ENST00000452264 FHAD1B1AJZ9 1412 aa29.2■■■□□ 2.27
SMIM1-202ENST00000452264 WRNQ14191 1432 aaPredicted RBP eCLIP29.19■■■□□ 2.26
SMIM1-202ENST00000452264 PRG4Q92954 1404 aaPredicted RBP29.16■■■□□ 2.26
SMIM1-202ENST00000452264 FAM69CQ0P6D2 419 aa29.15■■■□□ 2.26
SMIM1-202ENST00000452264 ABCC10Q5T3U5 1492 aa29.14■■■□□ 2.26
SMIM1-202ENST00000452264 ERICH3Q5RHP9 1530 aa29.08■■■□□ 2.25
SMIM1-202ENST00000452264 KDM4FA0A1W2PPD8 638 aa29.07■■■□□ 2.24
SMIM1-202ENST00000452264 JPH4Q96JJ6 628 aa29.07■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms