RNA–Protein interactions for RNA: ENST00000537345.5

ATP1A1-211, Transcript of ATPase Na+/K+ transporting subunit alpha 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene ATP1A1, Length 3,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1-211ENST00000537345 NISCHQ9Y2I1 1504 aa24.3■■□□□ 1.48
ATP1A1-211ENST00000537345 CCDC180Q9P1Z9 1646 aa20.85■□□□□ 0.93
ATP1A1-211ENST00000537345 ZCCHC6Q5VYS8 1495 aaKnown RBP20.57■□□□□ 0.88
ATP1A1-211ENST00000537345 SHROOM4Q9ULL8 1493 aa20.32■□□□□ 0.84
ATP1A1-211ENST00000537345 DCAF1Q9Y4B6 1507 aa20.04■□□□□ 0.8
ATP1A1-211ENST00000537345 SUPT5HO00267 1087 aaKnown RBP19.94■□□□□ 0.78
ATP1A1-211ENST00000537345 DCAF8L2P0C7V8 631 aa19.75■□□□□ 0.75
ATP1A1-211ENST00000537345 MYO15BQ96JP2 1530 aa19.53■□□□□ 0.72
ATP1A1-211ENST00000537345 ABCC9O60706 1549 aa19.39■□□□□ 0.7
ATP1A1-211ENST00000537345 SCRIBQ14160 1630 aa19.35■□□□□ 0.69
ATP1A1-211ENST00000537345 CHIC1Q5VXU3 224 aa19.33■□□□□ 0.68
ATP1A1-211ENST00000537345 NACADO15069 1562 aa19.22■□□□□ 0.67
ATP1A1-211ENST00000537345 RSF1Q96T23 1441 aaPredicted RBP19.12■□□□□ 0.65
ATP1A1-211ENST00000537345 PCGF6Q9BYE7 350 aa19.01■□□□□ 0.63
ATP1A1-211ENST00000537345 LOC105371045A0A1W2PR82 267 aa18.94■□□□□ 0.62
ATP1A1-211ENST00000537345 RB1CC1Q8TDY2 1594 aa18.94■□□□□ 0.62
ATP1A1-211ENST00000537345 CECR2Q9BXF3 1484 aa18.91■□□□□ 0.62
ATP1A1-211ENST00000537345 PPARGC1BQ86YN6 1023 aaKnown RBP18.88■□□□□ 0.61
ATP1A1-211ENST00000537345 HRCP23327 699 aa18.87■□□□□ 0.61
ATP1A1-211ENST00000537345 MROH2BQ7Z745 1585 aa18.86■□□□□ 0.61
ATP1A1-211ENST00000537345 UNC13AQ9UPW8 1703 aa18.8■□□□□ 0.6
ATP1A1-211ENST00000537345 WIZO95785 1651 aa18.78■□□□□ 0.6
ATP1A1-211ENST00000537345 BAZ1AQ9NRL2 1556 aaPredicted RBP18.69■□□□□ 0.58
ATP1A1-211ENST00000537345 EHMT2Q96KQ7 1210 aa18.64■□□□□ 0.57
ATP1A1-211ENST00000537345 EIF4G1Q04637 1599 aaKnown RBP18.61■□□□□ 0.57
ATP1A1-211ENST00000537345 SMARCA4P51532 1647 aa18.57■□□□□ 0.56
ATP1A1-211ENST00000537345 FAM9AQ8IZU1 332 aaPredicted RBP18.53■□□□□ 0.56
ATP1A1-211ENST00000537345 BICRAQ9NZM4 1560 aa18.5■□□□□ 0.55
ATP1A1-211ENST00000537345 TOP2AP11388 1531 aaKnown RBP18.49■□□□□ 0.55
ATP1A1-211ENST00000537345 TRIM41Q8WV44 630 aa18.49■□□□□ 0.55
ATP1A1-211ENST00000537345 SMARCA2P51531 1590 aa18.4■□□□□ 0.54
ATP1A1-211ENST00000537345 CCDC88BA6NC98 1476 aa18.35■□□□□ 0.53
ATP1A1-211ENST00000537345 PEG3Q9GZU2 1588 aa18.31■□□□□ 0.52
ATP1A1-211ENST00000537345 TRIM26Q12899 539 aaPredicted RBP18.29■□□□□ 0.52
ATP1A1-211ENST00000537345 ABCC8Q09428 1581 aa18.24■□□□□ 0.51
ATP1A1-211ENST00000537345 PABPN1Q86U42 306 aaKnown RBP eCLIP18.22■□□□□ 0.51
ATP1A1-211ENST00000537345 ATAD2BQ9ULI0 1458 aa18.07■□□□□ 0.48
ATP1A1-211ENST00000537345 TTBK1Q5TCY1 1321 aaPredicted RBP18.01■□□□□ 0.47
ATP1A1-211ENST00000537345 SOGA1O94964 1423 aa18■□□□□ 0.47
ATP1A1-211ENST00000537345 BAZ1BQ9UIG0 1483 aaKnown RBP17.96■□□□□ 0.46
ATP1A1-211ENST00000537345 RUSC2Q8N2Y8 1516 aa17.95■□□□□ 0.46
ATP1A1-211ENST00000537345 SYNJ1O43426 1573 aa17.94■□□□□ 0.46
ATP1A1-211ENST00000537345 WRNQ14191 1432 aaPredicted RBP eCLIP17.91■□□□□ 0.46
ATP1A1-211ENST00000537345 EEA1Q15075 1411 aa17.9■□□□□ 0.46
ATP1A1-211ENST00000537345 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.86■□□□□ 0.45
ATP1A1-211ENST00000537345 TNIKQ9UKE5 1360 aa17.83■□□□□ 0.44
ATP1A1-211ENST00000537345 CEP162Q5TB80 1403 aa17.82■□□□□ 0.44
ATP1A1-211ENST00000537345 HMGXB3Q12766 1538 aa17.8■□□□□ 0.44
ATP1A1-211ENST00000537345 CSRNP3Q8WYN3 585 aa17.79■□□□□ 0.44
ATP1A1-211ENST00000537345 KIF21BO75037 1637 aa17.77■□□□□ 0.43
ATP1A1-211ENST00000537345 NCAPD3P42695 1498 aa17.76■□□□□ 0.43
ATP1A1-211ENST00000537345 TOP2BQ02880 1626 aa17.75■□□□□ 0.43
ATP1A1-211ENST00000537345 GOLGA3Q08378 1498 aa17.75■□□□□ 0.43
ATP1A1-211ENST00000537345 BIVM-ERCC5R4GMW8 1640 aa17.74■□□□□ 0.43
ATP1A1-211ENST00000537345 ZEB1P37275 1124 aaPredicted RBP17.73■□□□□ 0.43
ATP1A1-211ENST00000537345 CEP164Q9UPV0 1460 aa17.67■□□□□ 0.42
ATP1A1-211ENST00000537345 SCAF1Q9H7N4 1312 aaKnown RBP17.67■□□□□ 0.42
ATP1A1-211ENST00000537345 CCER1Q8TC90 406 aaPredicted RBP17.66■□□□□ 0.42
ATP1A1-211ENST00000537345 PRDM2Q13029 1718 aa17.59■□□□□ 0.41
ATP1A1-211ENST00000537345 RAPGEF2Q9Y4G8 1499 aa17.59■□□□□ 0.41
ATP1A1-211ENST00000537345 CUX1P39880 1505 aa17.58■□□□□ 0.41
ATP1A1-211ENST00000537345 CFTRP13569 1480 aa17.58■□□□□ 0.41
ATP1A1-211ENST00000537345 UBTFP17480 764 aaKnown RBP17.58■□□□□ 0.4
ATP1A1-211ENST00000537345 PRXQ9BXM0 1461 aa17.5■□□□□ 0.39
ATP1A1-211ENST00000537345 CLIP1P30622 1438 aa17.49■□□□□ 0.39
ATP1A1-211ENST00000537345 ERICH3Q5RHP9 1530 aa17.49■□□□□ 0.39
ATP1A1-211ENST00000537345 RANGAP1P46060 587 aaPredicted RBP17.49■□□□□ 0.39
ATP1A1-211ENST00000537345 VPS8Q8N3P4 1428 aa17.45■□□□□ 0.38
ATP1A1-211ENST00000537345 NEUROD1Q13562 356 aa17.42■□□□□ 0.38
ATP1A1-211ENST00000537345 CC2D2AQ9P2K1 1620 aa17.4■□□□□ 0.38
ATP1A1-211ENST00000537345 DIEXFQ68CQ4 756 aaKnown RBP17.36■□□□□ 0.37
ATP1A1-211ENST00000537345 ARAP1Q96P48 1450 aa17.35■□□□□ 0.37
ATP1A1-211ENST00000537345 HNRNPUL2Q1KMD3 747 aaKnown RBP17.35■□□□□ 0.37
ATP1A1-211ENST00000537345 KIF27Q86VH2 1401 aa17.34■□□□□ 0.37
ATP1A1-211ENST00000537345 CADPSQ9ULU8 1353 aa17.34■□□□□ 0.37
ATP1A1-211ENST00000537345 ACIN1Q9UKV3 1341 aaKnown RBP17.28■□□□□ 0.36
ATP1A1-211ENST00000537345 YTHDC1Q96MU7 727 aaKnown RBP17.26■□□□□ 0.35
ATP1A1-211ENST00000537345 FGD5Q6ZNL6 1462 aa17.24■□□□□ 0.35
ATP1A1-211ENST00000537345 GTF3C3Q9Y5Q9 886 aa17.24■□□□□ 0.35
ATP1A1-211ENST00000537345 ARHGAP35Q9NRY4 1499 aa17.21■□□□□ 0.35
ATP1A1-211ENST00000537345 IGF1RP08069 1367 aa17.21■□□□□ 0.35
ATP1A1-211ENST00000537345 CUX2O14529 1486 aa17.21■□□□□ 0.35
ATP1A1-211ENST00000537345 FANCD2Q9BXW9 1451 aa17.18■□□□□ 0.34
ATP1A1-211ENST00000537345 DNMBPQ6XZF7 1577 aa17.15■□□□□ 0.34
ATP1A1-211ENST00000537345 PELP1Q8IZL8 1130 aaKnown RBP17.14■□□□□ 0.34
ATP1A1-211ENST00000537345 NESP48681 1621 aa17.12■□□□□ 0.33
ATP1A1-211ENST00000537345 KANK4Q5T7N3 995 aaPredicted RBP17.11■□□□□ 0.33
ATP1A1-211ENST00000537345 ZNF316A6NFI3 1004 aaPredicted RBP17.1■□□□□ 0.33
ATP1A1-211ENST00000537345 TOPBP1Q92547 1522 aa17.09■□□□□ 0.33
ATP1A1-211ENST00000537345 APLP2Q06481 763 aa17.09■□□□□ 0.33
ATP1A1-211ENST00000537345 ABCA10Q8WWZ4 1543 aa17.08■□□□□ 0.33
ATP1A1-211ENST00000537345 CARMIL1Q5VZK9 1371 aa17.08■□□□□ 0.32
ATP1A1-211ENST00000537345 WDR97A6NE52 1622 aa17.08■□□□□ 0.32
ATP1A1-211ENST00000537345 MIER1Q8N108 512 aa17.08■□□□□ 0.32
ATP1A1-211ENST00000537345 RRBP1Q9P2E9 1410 aaKnown RBP17.07■□□□□ 0.32
ATP1A1-211ENST00000537345 POLA1P09884 1462 aaPredicted RBP17.07■□□□□ 0.32
ATP1A1-211ENST00000537345 RAD54L2Q9Y4B4 1467 aa17.06■□□□□ 0.32
ATP1A1-211ENST00000537345 LAMC3Q9Y6N6 1575 aa17.05■□□□□ 0.32
ATP1A1-211ENST00000537345 MAP3K1Q13233 1512 aa17.02■□□□□ 0.32
ATP1A1-211ENST00000537345 CENPBP07199 599 aaPredicted RBP17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms