RNA–Protein interactions for RNA: ENST00000369496.8

ATP1A1-203, Transcript of ATPase Na+/K+ transporting subunit alpha 1, humanhuman

TSL 2 BASIC

Gene ATP1A1, Length 3,572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1-203ENST00000369496 NISCHQ9Y2I1 1504 aa13.64□□□□□ -0.23
ATP1A1-203ENST00000369496 CCDC180Q9P1Z9 1646 aa11.93□□□□□ -0.5
ATP1A1-203ENST00000369496 HRCP23327 699 aa11.7□□□□□ -0.54
ATP1A1-203ENST00000369496 PELP1Q8IZL8 1130 aaKnown RBP11.67□□□□□ -0.54
ATP1A1-203ENST00000369496 ABCC9O60706 1549 aa11.65□□□□□ -0.54
ATP1A1-203ENST00000369496 PPARGC1BQ86YN6 1023 aaKnown RBP11.55□□□□□ -0.56
ATP1A1-203ENST00000369496 DCAF8L2P0C7V8 631 aa11.53□□□□□ -0.56
ATP1A1-203ENST00000369496 ZCCHC6Q5VYS8 1495 aaKnown RBP11.52□□□□□ -0.57
ATP1A1-203ENST00000369496 PCGF6Q9BYE7 350 aa11.47□□□□□ -0.57
ATP1A1-203ENST00000369496 MYT1Q01538 1121 aa11.28□□□□□ -0.6
ATP1A1-203ENST00000369496 DCAF1Q9Y4B6 1507 aa11.27□□□□□ -0.61
ATP1A1-203ENST00000369496 MYO15BQ96JP2 1530 aa11.27□□□□□ -0.61
ATP1A1-203ENST00000369496 SUPT5HO00267 1087 aaKnown RBP11.25□□□□□ -0.61
ATP1A1-203ENST00000369496 SCAF1Q9H7N4 1312 aaKnown RBP11.23□□□□□ -0.61
ATP1A1-203ENST00000369496 NACADO15069 1562 aa11.18□□□□□ -0.62
ATP1A1-203ENST00000369496 RB1CC1Q8TDY2 1594 aa11.16□□□□□ -0.62
ATP1A1-203ENST00000369496 SHROOM4Q9ULL8 1493 aa11.15□□□□□ -0.62
ATP1A1-203ENST00000369496 SCRIBQ14160 1630 aa11.08□□□□□ -0.64
ATP1A1-203ENST00000369496 CHIC1Q5VXU3 224 aa11.05□□□□□ -0.64
ATP1A1-203ENST00000369496 PABPN1Q86U42 306 aaKnown RBP eCLIP10.98□□□□□ -0.65
ATP1A1-203ENST00000369496 UNC13AQ9UPW8 1703 aa10.96□□□□□ -0.66
ATP1A1-203ENST00000369496 TRIM26Q12899 539 aaPredicted RBP10.92□□□□□ -0.66
ATP1A1-203ENST00000369496 ZEB1P37275 1124 aaPredicted RBP10.91□□□□□ -0.66
ATP1A1-203ENST00000369496 ACIN1Q9UKV3 1341 aaKnown RBP10.89□□□□□ -0.67
ATP1A1-203ENST00000369496 GTF3C3Q9Y5Q9 886 aa10.87□□□□□ -0.67
ATP1A1-203ENST00000369496 LOC105371045A0A1W2PR82 267 aa10.87□□□□□ -0.67
ATP1A1-203ENST00000369496 NEUROD1Q13562 356 aa10.87□□□□□ -0.67
ATP1A1-203ENST00000369496 BICRAQ9NZM4 1560 aa10.86□□□□□ -0.67
ATP1A1-203ENST00000369496 DNAJC5BQ9UF47 199 aa10.85□□□□□ -0.67
ATP1A1-203ENST00000369496 CENPBP07199 599 aaPredicted RBP10.78□□□□□ -0.68
ATP1A1-203ENST00000369496 EIF4G1Q04637 1599 aaKnown RBP10.7□□□□□ -0.7
ATP1A1-203ENST00000369496 CECR2Q9BXF3 1484 aa10.68□□□□□ -0.7
ATP1A1-203ENST00000369496 RSF1Q96T23 1441 aaPredicted RBP10.67□□□□□ -0.7
ATP1A1-203ENST00000369496 DIEXFQ68CQ4 756 aaKnown RBP10.61□□□□□ -0.71
ATP1A1-203ENST00000369496 YTHDC1Q96MU7 727 aaKnown RBP10.61□□□□□ -0.71
ATP1A1-203ENST00000369496 TTBK1Q5TCY1 1321 aaPredicted RBP10.59□□□□□ -0.71
ATP1A1-203ENST00000369496 BCL11AQ9H165 835 aa10.59□□□□□ -0.71
ATP1A1-203ENST00000369496 DNAJC5Q9H3Z4 198 aa10.59□□□□□ -0.71
ATP1A1-203ENST00000369496 MROH2BQ7Z745 1585 aa10.57□□□□□ -0.72
ATP1A1-203ENST00000369496 CCER1Q8TC90 406 aaPredicted RBP10.54□□□□□ -0.72
ATP1A1-203ENST00000369496 SMARCA4P51532 1647 aa10.54□□□□□ -0.72
ATP1A1-203ENST00000369496 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.54□□□□□ -0.72
ATP1A1-203ENST00000369496 BAZ1AQ9NRL2 1556 aaPredicted RBP10.54□□□□□ -0.72
ATP1A1-203ENST00000369496 EHMT2Q96KQ7 1210 aa10.52□□□□□ -0.72
ATP1A1-203ENST00000369496 FAM9AQ8IZU1 332 aaPredicted RBP10.49□□□□□ -0.73
ATP1A1-203ENST00000369496 WIZO95785 1651 aa10.48□□□□□ -0.73
ATP1A1-203ENST00000369496 CC2D2AQ9P2K1 1620 aa10.47□□□□□ -0.73
ATP1A1-203ENST00000369496 ATAD2BQ9ULI0 1458 aa10.43□□□□□ -0.74
ATP1A1-203ENST00000369496 ANP32EQ9BTT0 268 aa10.4□□□□□ -0.74
ATP1A1-203ENST00000369496 WRNQ14191 1432 aaPredicted RBP eCLIP10.39□□□□□ -0.75
ATP1A1-203ENST00000369496 SMARCA2P51531 1590 aa10.38□□□□□ -0.75
ATP1A1-203ENST00000369496 BAZ1BQ9UIG0 1483 aaKnown RBP10.37□□□□□ -0.75
ATP1A1-203ENST00000369496 PEG3Q9GZU2 1588 aa10.35□□□□□ -0.75
ATP1A1-203ENST00000369496 NCAPD3P42695 1498 aa10.33□□□□□ -0.76
ATP1A1-203ENST00000369496 CSRNP3Q8WYN3 585 aa10.33□□□□□ -0.76
ATP1A1-203ENST00000369496 PRKCSHP14314 528 aaPredicted RBP10.31□□□□□ -0.76
ATP1A1-203ENST00000369496 TOP2AP11388 1531 aaKnown RBP10.31□□□□□ -0.76
ATP1A1-203ENST00000369496 ZNF316A6NFI3 1004 aaPredicted RBP10.31□□□□□ -0.76
ATP1A1-203ENST00000369496 TRIM41Q8WV44 630 aa10.3□□□□□ -0.76
ATP1A1-203ENST00000369496 MIER1Q8N108 512 aa10.3□□□□□ -0.76
ATP1A1-203ENST00000369496 HMGXB3Q12766 1538 aa10.29□□□□□ -0.76
ATP1A1-203ENST00000369496 CUX2O14529 1486 aa10.25□□□□□ -0.77
ATP1A1-203ENST00000369496 TSHZ2Q9NRE2 1034 aa10.25□□□□□ -0.77
ATP1A1-203ENST00000369496 CCDC88BA6NC98 1476 aa10.24□□□□□ -0.77
ATP1A1-203ENST00000369496 SUPT16HQ9Y5B9 1047 aaKnown RBP10.23□□□□□ -0.77
ATP1A1-203ENST00000369496 KIF21BO75037 1637 aa10.16□□□□□ -0.78
ATP1A1-203ENST00000369496 NESP48681 1621 aa10.15□□□□□ -0.78
ATP1A1-203ENST00000369496 EEA1Q15075 1411 aa10.15□□□□□ -0.78
ATP1A1-203ENST00000369496 TNIKQ9UKE5 1360 aa10.15□□□□□ -0.79
ATP1A1-203ENST00000369496 ABCC8Q09428 1581 aa10.15□□□□□ -0.79
ATP1A1-203ENST00000369496 BCANQ96GW7 911 aa10.14□□□□□ -0.79
ATP1A1-203ENST00000369496 CEP162Q5TB80 1403 aa10.12□□□□□ -0.79
ATP1A1-203ENST00000369496 CLSPNQ9HAW4 1339 aa10.1□□□□□ -0.79
ATP1A1-203ENST00000369496 CADPSQ9ULU8 1353 aa10.09□□□□□ -0.79
ATP1A1-203ENST00000369496 ERICH6Q7L0X2 663 aa10.09□□□□□ -0.79
ATP1A1-203ENST00000369496 CFTRP13569 1480 aa10.06□□□□□ -0.8
ATP1A1-203ENST00000369496 SOGA1O94964 1423 aa10.05□□□□□ -0.8
ATP1A1-203ENST00000369496 RUSC2Q8N2Y8 1516 aa10.03□□□□□ -0.8
ATP1A1-203ENST00000369496 SYNJ1O43426 1573 aa10.03□□□□□ -0.8
ATP1A1-203ENST00000369496 GOLGA3Q08378 1498 aa10.02□□□□□ -0.81
ATP1A1-203ENST00000369496 LAMC3Q9Y6N6 1575 aa10.02□□□□□ -0.81
ATP1A1-203ENST00000369496 RBM19Q9Y4C8 960 aaKnown RBP10.01□□□□□ -0.81
ATP1A1-203ENST00000369496 FANCD2Q9BXW9 1451 aa10□□□□□ -0.81
ATP1A1-203ENST00000369496 HNRNPUL2Q1KMD3 747 aaKnown RBP10□□□□□ -0.81
ATP1A1-203ENST00000369496 BIVM-ERCC5R4GMW8 1640 aa10□□□□□ -0.81
ATP1A1-203ENST00000369496 ERCC6Q03468 1493 aa9.99□□□□□ -0.81
ATP1A1-203ENST00000369496 FKBP8Q14318 412 aa9.99□□□□□ -0.81
ATP1A1-203ENST00000369496 KIF21AQ7Z4S6 1674 aa9.98□□□□□ -0.81
ATP1A1-203ENST00000369496 PDS5BQ9NTI5 1447 aa9.98□□□□□ -0.81
ATP1A1-203ENST00000369496 CEP164Q9UPV0 1460 aa9.95□□□□□ -0.82
ATP1A1-203ENST00000369496 PRDM2Q13029 1718 aa9.95□□□□□ -0.82
ATP1A1-203ENST00000369496 ITGAEP38570 1179 aa9.94□□□□□ -0.82
ATP1A1-203ENST00000369496 TOP2BQ02880 1626 aa9.94□□□□□ -0.82
ATP1A1-203ENST00000369496 NEFLP07196 543 aa9.94□□□□□ -0.82
ATP1A1-203ENST00000369496 ANO8Q9HCE9 1232 aaPredicted RBP9.93□□□□□ -0.82
ATP1A1-203ENST00000369496 ERICH3Q5RHP9 1530 aa9.93□□□□□ -0.82
ATP1A1-203ENST00000369496 VPS8Q8N3P4 1428 aa9.92□□□□□ -0.82
ATP1A1-203ENST00000369496 THOC2Q8NI27 1593 aaKnown RBP9.92□□□□□ -0.82
ATP1A1-203ENST00000369496 MSH5O43196 834 aa9.9□□□□□ -0.82
ATP1A1-203ENST00000369496 CLIP1P30622 1438 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms