Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HCFC1P51610 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HCFC1P51610 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HCFC1P51610 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
HCFC1P51610 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HCFC1P51610 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
HCFC1P51610 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HCFC1P51610 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.19■□□□□ 0.98
HCFC1P51610 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HCFC1P51610 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.18■□□□□ 0.98
HCFC1P51610 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HCFC1P51610 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HCFC1P51610 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
HCFC1P51610 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HCFC1P51610 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HCFC1P51610 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HCFC1P51610 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HCFC1P51610 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HCFC1P51610 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HCFC1P51610 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
HCFC1P51610 AC008406.3-201ENST00000620001 1374 ntBASIC21.17■□□□□ 0.98
HCFC1P51610 KRT18P10-201ENST00000388836 1287 ntBASIC21.17■□□□□ 0.98
HCFC1P51610 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.17■□□□□ 0.98
HCFC1P51610 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HCFC1P51610 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
HCFC1P51610 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HCFC1P51610 AC131281.2-201ENST00000520478 145 ntBASIC21.16■□□□□ 0.98
HCFC1P51610 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HCFC1P51610 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HCFC1P51610 AL449106.1-201ENST00000608517 1980 ntBASIC21.16■□□□□ 0.98
HCFC1P51610 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.16■□□□□ 0.98
HCFC1P51610 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HCFC1P51610 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HCFC1P51610 DRD5P2-201ENST00000421395 2012 ntBASIC21.15■□□□□ 0.98
HCFC1P51610 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
HCFC1P51610 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HCFC1P51610 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.15■□□□□ 0.98
HCFC1P51610 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.15■□□□□ 0.98
HCFC1P51610 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HCFC1P51610 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HCFC1P51610 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HCFC1P51610 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HCFC1P51610 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.14■□□□□ 0.98
HCFC1P51610 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HCFC1P51610 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HCFC1P51610 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
HCFC1P51610 LONRF2P2-201ENST00000439212 571 ntBASIC21.14■□□□□ 0.97
HCFC1P51610 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
HCFC1P51610 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.13■□□□□ 0.97
HCFC1P51610 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HCFC1P51610 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HCFC1P51610 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
HCFC1P51610 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HCFC1P51610 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HCFC1P51610 KRT18P24-201ENST00000344739 1156 ntBASIC21.12■□□□□ 0.97
HCFC1P51610 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.12■□□□□ 0.97
HCFC1P51610 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
HCFC1P51610 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.12■□□□□ 0.97
HCFC1P51610 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.12■□□□□ 0.97
HCFC1P51610 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HCFC1P51610 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
HCFC1P51610 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.12■□□□□ 0.97
HCFC1P51610 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HCFC1P51610 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
HCFC1P51610 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HCFC1P51610 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.11■□□□□ 0.97
HCFC1P51610 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.11■□□□□ 0.97
HCFC1P51610 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HCFC1P51610 AC137630.3-201ENST00000607245 391 ntBASIC21.11■□□□□ 0.97
HCFC1P51610 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
HCFC1P51610 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.1■□□□□ 0.97
HCFC1P51610 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HCFC1P51610 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
HCFC1P51610 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HCFC1P51610 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
HCFC1P51610 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HCFC1P51610 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
HCFC1P51610 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
HCFC1P51610 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.09■□□□□ 0.97
HCFC1P51610 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
HCFC1P51610 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
HCFC1P51610 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
HCFC1P51610 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HCFC1P51610 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
HCFC1P51610 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.97
HCFC1P51610 MIR4281-201ENST00000580852 62 ntBASIC21.08■□□□□ 0.97
HCFC1P51610 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
HCFC1P51610 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
HCFC1P51610 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HCFC1P51610 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HCFC1P51610 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HCFC1P51610 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.07■□□□□ 0.96
HCFC1P51610 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.07■□□□□ 0.96
HCFC1P51610 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
HCFC1P51610 MIR935-201ENST00000401179 91 ntBASIC21.07■□□□□ 0.96
HCFC1P51610 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.07■□□□□ 0.96
HCFC1P51610 LINC01003-201ENST00000564834 1764 ntBASIC21.07■□□□□ 0.96
HCFC1P51610 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HCFC1P51610 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
HCFC1P51610 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms