Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC18.22■□□□□ 0.51
TCRAP04437 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TCRAP04437 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TCRAP04437 LINC01124-201ENST00000409786 2117 ntBASIC18.21■□□□□ 0.51
TCRAP04437 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TCRAP04437 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TCRAP04437 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TCRAP04437 AP003733.4-201ENST00000623785 1697 ntBASIC18.21■□□□□ 0.51
TCRAP04437 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TCRAP04437 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
TCRAP04437 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
TCRAP04437 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TCRAP04437 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TCRAP04437 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TCRAP04437 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
TCRAP04437 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TCRAP04437 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TCRAP04437 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TCRAP04437 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TCRAP04437 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TCRAP04437 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC18.19■□□□□ 0.5
TCRAP04437 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC18.19■□□□□ 0.5
TCRAP04437 AC021231.2-201ENST00000594613 730 ntBASIC18.19■□□□□ 0.5
TCRAP04437 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
TCRAP04437 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TCRAP04437 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TCRAP04437 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TCRAP04437 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TCRAP04437 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TCRAP04437 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TCRAP04437 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TCRAP04437 BOD1-206ENST00000480951 814 ntTSL 2 BASIC18.18■□□□□ 0.5
TCRAP04437 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TCRAP04437 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TCRAP04437 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC18.18■□□□□ 0.5
TCRAP04437 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TCRAP04437 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC18.17■□□□□ 0.5
TCRAP04437 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TCRAP04437 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC18.17■□□□□ 0.5
TCRAP04437 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TCRAP04437 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TCRAP04437 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TCRAP04437 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
TCRAP04437 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TCRAP04437 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
TCRAP04437 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TCRAP04437 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TCRAP04437 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TCRAP04437 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TCRAP04437 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TCRAP04437 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TCRAP04437 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TCRAP04437 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TCRAP04437 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TCRAP04437 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TCRAP04437 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC18.16■□□□□ 0.5
TCRAP04437 NRG1-221ENST00000614767 762 ntTSL 5 BASIC18.16■□□□□ 0.5
TCRAP04437 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TCRAP04437 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
TCRAP04437 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TCRAP04437 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TCRAP04437 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC18.15■□□□□ 0.5
TCRAP04437 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TCRAP04437 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TCRAP04437 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TCRAP04437 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TCRAP04437 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TCRAP04437 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TCRAP04437 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.15■□□□□ 0.5
TCRAP04437 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TCRAP04437 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TCRAP04437 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TCRAP04437 DUX4L29-201ENST00000425409 679 ntBASIC18.14■□□□□ 0.49
TCRAP04437 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
TCRAP04437 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TCRAP04437 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TCRAP04437 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TCRAP04437 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
TCRAP04437 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TCRAP04437 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TCRAP04437 AC133561.1-201ENST00000568600 2415 ntBASIC18.13■□□□□ 0.49
TCRAP04437 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TCRAP04437 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TCRAP04437 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TCRAP04437 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC18.12■□□□□ 0.49
TCRAP04437 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
TCRAP04437 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TCRAP04437 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.12■□□□□ 0.49
TCRAP04437 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TCRAP04437 AL162393.1-201ENST00000437852 946 ntBASIC18.11■□□□□ 0.49
TCRAP04437 CHML-204ENST00000638121 920 ntTSL 2 BASIC18.11■□□□□ 0.49
TCRAP04437 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TCRAP04437 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TCRAP04437 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TCRAP04437 AC097639.1-201ENST00000565519 1891 ntBASIC18.11■□□□□ 0.49
TCRAP04437 AC012676.1-201ENST00000574705 1949 ntBASIC18.11■□□□□ 0.49
TCRAP04437 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TCRAP04437 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TCRAP04437 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TCRAP04437 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms