Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SUPT3HO75486 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SUPT3HO75486 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SUPT3HO75486 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SUPT3HO75486 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SUPT3HO75486 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SUPT3HO75486 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SUPT3HO75486 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
SUPT3HO75486 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.65■■□□□ 1.38
SUPT3HO75486 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
SUPT3HO75486 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
SUPT3HO75486 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
SUPT3HO75486 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
SUPT3HO75486 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
SUPT3HO75486 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.64■■□□□ 1.37
SUPT3HO75486 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SUPT3HO75486 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SUPT3HO75486 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SUPT3HO75486 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SUPT3HO75486 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.63■■□□□ 1.37
SUPT3HO75486 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SUPT3HO75486 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SUPT3HO75486 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.63■■□□□ 1.37
SUPT3HO75486 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.62■■□□□ 1.37
SUPT3HO75486 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
SUPT3HO75486 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SUPT3HO75486 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.62■■□□□ 1.37
SUPT3HO75486 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.62■■□□□ 1.37
SUPT3HO75486 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SUPT3HO75486 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
SUPT3HO75486 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.62■■□□□ 1.37
SUPT3HO75486 MIR639-201ENST00000384974 98 ntBASIC23.61■■□□□ 1.37
SUPT3HO75486 AL157400.5-201ENST00000507624 621 ntBASIC23.61■■□□□ 1.37
SUPT3HO75486 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SUPT3HO75486 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
SUPT3HO75486 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SUPT3HO75486 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.61■■□□□ 1.37
SUPT3HO75486 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SUPT3HO75486 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SUPT3HO75486 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
SUPT3HO75486 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SUPT3HO75486 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.6■■□□□ 1.37
SUPT3HO75486 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.6■■□□□ 1.37
SUPT3HO75486 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.6■■□□□ 1.37
SUPT3HO75486 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SUPT3HO75486 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SUPT3HO75486 TPT1-202ENST00000379055 948 ntTSL 2 BASIC23.6■■□□□ 1.37
SUPT3HO75486 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.6■■□□□ 1.37
SUPT3HO75486 AC060814.1-201ENST00000554326 538 ntBASIC23.6■■□□□ 1.37
SUPT3HO75486 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SUPT3HO75486 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SUPT3HO75486 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.6■■□□□ 1.37
SUPT3HO75486 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.59■■□□□ 1.37
SUPT3HO75486 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC23.59■■□□□ 1.37
SUPT3HO75486 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SUPT3HO75486 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SUPT3HO75486 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
SUPT3HO75486 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SUPT3HO75486 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
SUPT3HO75486 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SUPT3HO75486 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
SUPT3HO75486 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SUPT3HO75486 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.58■■□□□ 1.37
SUPT3HO75486 MOB2-207ENST00000614710 705 ntTSL 5 BASIC23.58■■□□□ 1.37
SUPT3HO75486 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SUPT3HO75486 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SUPT3HO75486 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
SUPT3HO75486 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
SUPT3HO75486 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.57■■□□□ 1.36
SUPT3HO75486 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SUPT3HO75486 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SUPT3HO75486 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SUPT3HO75486 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.57■■□□□ 1.36
SUPT3HO75486 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
SUPT3HO75486 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SUPT3HO75486 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.56■■□□□ 1.36
SUPT3HO75486 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.56■■□□□ 1.36
SUPT3HO75486 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
SUPT3HO75486 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
SUPT3HO75486 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SUPT3HO75486 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SUPT3HO75486 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.55■■□□□ 1.36
SUPT3HO75486 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SUPT3HO75486 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SUPT3HO75486 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.54■■□□□ 1.36
SUPT3HO75486 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
SUPT3HO75486 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SUPT3HO75486 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SUPT3HO75486 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.54■■□□□ 1.36
SUPT3HO75486 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SUPT3HO75486 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SUPT3HO75486 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
SUPT3HO75486 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.53■■□□□ 1.36
SUPT3HO75486 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SUPT3HO75486 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.53■■□□□ 1.36
SUPT3HO75486 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SUPT3HO75486 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.52■■□□□ 1.36
SUPT3HO75486 AC025884.2-201ENST00000553429 711 ntBASIC23.52■■□□□ 1.36
SUPT3HO75486 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SUPT3HO75486 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms