Protein–RNA interactions for Protein: O75438

NDUFB1, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB1O75438 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
NDUFB1O75438 AC079834.2-201ENST00000609776 1949 ntBASIC14.26□□□□□ -0.13
NDUFB1O75438 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NDUFB1O75438 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NDUFB1O75438 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
NDUFB1O75438 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
NDUFB1O75438 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NDUFB1O75438 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFB1O75438 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFB1O75438 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFB1O75438 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC14.25□□□□□ -0.13
NDUFB1O75438 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC14.25□□□□□ -0.13
NDUFB1O75438 AP002365.1-201ENST00000603448 772 ntBASIC14.25□□□□□ -0.13
NDUFB1O75438 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFB1O75438 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFB1O75438 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
NDUFB1O75438 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC14.24□□□□□ -0.13
NDUFB1O75438 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFB1O75438 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFB1O75438 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFB1O75438 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
NDUFB1O75438 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC14.24□□□□□ -0.13
NDUFB1O75438 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFB1O75438 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFB1O75438 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFB1O75438 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFB1O75438 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
NDUFB1O75438 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC14.23□□□□□ -0.13
NDUFB1O75438 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFB1O75438 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFB1O75438 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
NDUFB1O75438 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
NDUFB1O75438 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFB1O75438 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFB1O75438 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
NDUFB1O75438 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC14.22□□□□□ -0.13
NDUFB1O75438 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFB1O75438 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFB1O75438 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFB1O75438 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
NDUFB1O75438 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC14.22□□□□□ -0.13
NDUFB1O75438 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFB1O75438 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFB1O75438 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFB1O75438 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFB1O75438 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFB1O75438 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFB1O75438 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NDUFB1O75438 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
NDUFB1O75438 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC14.21□□□□□ -0.13
NDUFB1O75438 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
NDUFB1O75438 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC14.21□□□□□ -0.13
NDUFB1O75438 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC14.21□□□□□ -0.13
NDUFB1O75438 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NDUFB1O75438 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NDUFB1O75438 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NDUFB1O75438 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
NDUFB1O75438 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NDUFB1O75438 AC133561.1-201ENST00000568600 2415 ntBASIC14.21□□□□□ -0.14
NDUFB1O75438 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
NDUFB1O75438 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NDUFB1O75438 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.14
NDUFB1O75438 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
NDUFB1O75438 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC14.2□□□□□ -0.14
NDUFB1O75438 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC14.2□□□□□ -0.14
NDUFB1O75438 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFB1O75438 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC14.2□□□□□ -0.14
NDUFB1O75438 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFB1O75438 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
NDUFB1O75438 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
NDUFB1O75438 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
NDUFB1O75438 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFB1O75438 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
NDUFB1O75438 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFB1O75438 AP004609.3-201ENST00000610705 1884 ntBASIC14.2□□□□□ -0.14
NDUFB1O75438 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
NDUFB1O75438 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC14.2□□□□□ -0.14
NDUFB1O75438 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC14.2□□□□□ -0.14
NDUFB1O75438 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
NDUFB1O75438 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFB1O75438 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
NDUFB1O75438 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC14.19□□□□□ -0.14
NDUFB1O75438 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFB1O75438 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFB1O75438 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC14.19□□□□□ -0.14
NDUFB1O75438 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC14.19□□□□□ -0.14
NDUFB1O75438 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFB1O75438 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC14.19□□□□□ -0.14
NDUFB1O75438 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFB1O75438 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
NDUFB1O75438 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFB1O75438 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFB1O75438 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFB1O75438 HCG11-201ENST00000411553 5696 ntBASIC14.18□□□□□ -0.14
NDUFB1O75438 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFB1O75438 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
NDUFB1O75438 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFB1O75438 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFB1O75438 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFB1O75438 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms