Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC17.76■□□□□ 0.43
SNAI2O43623 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC17.76■□□□□ 0.43
SNAI2O43623 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNAI2O43623 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SNAI2O43623 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNAI2O43623 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC17.75■□□□□ 0.43
SNAI2O43623 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC17.75■□□□□ 0.43
SNAI2O43623 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SNAI2O43623 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNAI2O43623 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
SNAI2O43623 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNAI2O43623 AC022211.4-201ENST00000625094 2161 ntBASIC17.74■□□□□ 0.43
SNAI2O43623 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNAI2O43623 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SNAI2O43623 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNAI2O43623 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC17.74■□□□□ 0.43
SNAI2O43623 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC17.74■□□□□ 0.43
SNAI2O43623 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC17.74■□□□□ 0.43
SNAI2O43623 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SNAI2O43623 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNAI2O43623 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SNAI2O43623 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SNAI2O43623 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNAI2O43623 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNAI2O43623 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNAI2O43623 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNAI2O43623 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SNAI2O43623 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNAI2O43623 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
SNAI2O43623 AL139125.2-201ENST00000623134 1869 ntBASIC17.73■□□□□ 0.43
SNAI2O43623 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNAI2O43623 AC138932.3-201ENST00000567634 1902 ntBASIC17.72■□□□□ 0.43
SNAI2O43623 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SNAI2O43623 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC17.72■□□□□ 0.43
SNAI2O43623 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNAI2O43623 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC17.72■□□□□ 0.43
SNAI2O43623 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SNAI2O43623 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNAI2O43623 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SNAI2O43623 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNAI2O43623 AC087741.3-201ENST00000624270 1347 ntBASIC17.72■□□□□ 0.43
SNAI2O43623 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
SNAI2O43623 PREB-202ENST00000406567 1910 ntTSL 5 BASIC17.71■□□□□ 0.43
SNAI2O43623 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNAI2O43623 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC17.71■□□□□ 0.43
SNAI2O43623 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC17.7■□□□□ 0.42
SNAI2O43623 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNAI2O43623 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SNAI2O43623 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SNAI2O43623 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SNAI2O43623 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNAI2O43623 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNAI2O43623 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNAI2O43623 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNAI2O43623 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNAI2O43623 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNAI2O43623 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNAI2O43623 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC17.69■□□□□ 0.42
SNAI2O43623 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNAI2O43623 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNAI2O43623 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC17.69■□□□□ 0.42
SNAI2O43623 AC096887.2-201ENST00000623443 1957 ntBASIC17.69■□□□□ 0.42
SNAI2O43623 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNAI2O43623 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SNAI2O43623 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNAI2O43623 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNAI2O43623 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNAI2O43623 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC17.68■□□□□ 0.42
SNAI2O43623 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC17.68■□□□□ 0.42
SNAI2O43623 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SNAI2O43623 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNAI2O43623 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNAI2O43623 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNAI2O43623 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNAI2O43623 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNAI2O43623 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC17.68■□□□□ 0.42
SNAI2O43623 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
SNAI2O43623 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNAI2O43623 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNAI2O43623 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNAI2O43623 AC044849.2-201ENST00000606596 710 ntBASIC17.67■□□□□ 0.42
SNAI2O43623 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNAI2O43623 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SNAI2O43623 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SNAI2O43623 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNAI2O43623 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC17.66■□□□□ 0.42
SNAI2O43623 TMEM202-AS1-202ENST00000565181 2325 ntBASIC17.66■□□□□ 0.42
SNAI2O43623 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNAI2O43623 CLDN5-201ENST00000403084 2357 ntBASIC17.66■□□□□ 0.42
SNAI2O43623 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SNAI2O43623 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNAI2O43623 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNAI2O43623 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNAI2O43623 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SNAI2O43623 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC17.66■□□□□ 0.42
SNAI2O43623 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC17.66■□□□□ 0.42
SNAI2O43623 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SNAI2O43623 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SNAI2O43623 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNAI2O43623 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms