Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC17.76■□□□□ 0.43
SNAI2O43623 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC17.76■□□□□ 0.43
SNAI2O43623 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNAI2O43623 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SNAI2O43623 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNAI2O43623 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC17.75■□□□□ 0.43
SNAI2O43623 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC17.75■□□□□ 0.43
SNAI2O43623 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SNAI2O43623 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNAI2O43623 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
SNAI2O43623 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNAI2O43623 AC022211.4-201ENST00000625094 2161 ntBASIC17.74■□□□□ 0.43
SNAI2O43623 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNAI2O43623 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SNAI2O43623 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNAI2O43623 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC17.74■□□□□ 0.43
SNAI2O43623 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC17.74■□□□□ 0.43
SNAI2O43623 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC17.74■□□□□ 0.43
SNAI2O43623 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SNAI2O43623 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNAI2O43623 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SNAI2O43623 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SNAI2O43623 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNAI2O43623 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNAI2O43623 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNAI2O43623 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNAI2O43623 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SNAI2O43623 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNAI2O43623 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
SNAI2O43623 AL139125.2-201ENST00000623134 1869 ntBASIC17.73■□□□□ 0.43
SNAI2O43623 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNAI2O43623 AC138932.3-201ENST00000567634 1902 ntBASIC17.72■□□□□ 0.43
SNAI2O43623 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SNAI2O43623 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC17.72■□□□□ 0.43
SNAI2O43623 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNAI2O43623 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC17.72■□□□□ 0.43
SNAI2O43623 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SNAI2O43623 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNAI2O43623 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SNAI2O43623 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNAI2O43623 AC087741.3-201ENST00000624270 1347 ntBASIC17.72■□□□□ 0.43
SNAI2O43623 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
SNAI2O43623 PREB-202ENST00000406567 1910 ntTSL 5 BASIC17.71■□□□□ 0.43
SNAI2O43623 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNAI2O43623 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC17.71■□□□□ 0.43
SNAI2O43623 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC17.7■□□□□ 0.42
SNAI2O43623 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNAI2O43623 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SNAI2O43623 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SNAI2O43623 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SNAI2O43623 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNAI2O43623 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNAI2O43623 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNAI2O43623 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNAI2O43623 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNAI2O43623 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNAI2O43623 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNAI2O43623 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC17.69■□□□□ 0.42
SNAI2O43623 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNAI2O43623 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNAI2O43623 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC17.69■□□□□ 0.42
SNAI2O43623 AC096887.2-201ENST00000623443 1957 ntBASIC17.69■□□□□ 0.42
SNAI2O43623 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNAI2O43623 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SNAI2O43623 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNAI2O43623 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNAI2O43623 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNAI2O43623 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC17.68■□□□□ 0.42
SNAI2O43623 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC17.68■□□□□ 0.42
SNAI2O43623 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SNAI2O43623 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNAI2O43623 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNAI2O43623 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNAI2O43623 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNAI2O43623 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNAI2O43623 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC17.68■□□□□ 0.42
SNAI2O43623 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
SNAI2O43623 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNAI2O43623 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNAI2O43623 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNAI2O43623 AC044849.2-201ENST00000606596 710 ntBASIC17.67■□□□□ 0.42
SNAI2O43623 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNAI2O43623 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SNAI2O43623 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SNAI2O43623 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNAI2O43623 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC17.66■□□□□ 0.42
SNAI2O43623 TMEM202-AS1-202ENST00000565181 2325 ntBASIC17.66■□□□□ 0.42
SNAI2O43623 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNAI2O43623 CLDN5-201ENST00000403084 2357 ntBASIC17.66■□□□□ 0.42
SNAI2O43623 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SNAI2O43623 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNAI2O43623 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNAI2O43623 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNAI2O43623 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SNAI2O43623 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC17.66■□□□□ 0.42
SNAI2O43623 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC17.66■□□□□ 0.42
SNAI2O43623 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SNAI2O43623 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SNAI2O43623 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNAI2O43623 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms