Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AP004833.2-201ENST00000532228 1454 ntBASIC28.92■■■□□ 2.22
FOXN1O15353 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC28.92■■■□□ 2.22
FOXN1O15353 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
FOXN1O15353 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC28.91■■■□□ 2.22
FOXN1O15353 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC28.91■■■□□ 2.22
FOXN1O15353 AC133561.4-201ENST00000566112 224 ntBASIC28.91■■■□□ 2.22
FOXN1O15353 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC28.91■■■□□ 2.22
FOXN1O15353 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC28.9■■■□□ 2.22
FOXN1O15353 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
FOXN1O15353 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
FOXN1O15353 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
FOXN1O15353 TSPY9P-201ENST00000440215 945 ntBASIC28.9■■■□□ 2.22
FOXN1O15353 TSPY11P-201ENST00000442607 1045 ntBASIC28.9■■■□□ 2.22
FOXN1O15353 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC28.9■■■□□ 2.22
FOXN1O15353 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
FOXN1O15353 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC28.88■■■□□ 2.21
FOXN1O15353 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC28.88■■■□□ 2.21
FOXN1O15353 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC28.88■■■□□ 2.21
FOXN1O15353 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
FOXN1O15353 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
FOXN1O15353 AC135279.3-201ENST00000610945 1311 ntBASIC28.88■■■□□ 2.21
FOXN1O15353 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC28.87■■■□□ 2.21
FOXN1O15353 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC28.87■■■□□ 2.21
FOXN1O15353 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC28.87■■■□□ 2.21
FOXN1O15353 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
FOXN1O15353 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC28.87■■■□□ 2.21
FOXN1O15353 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
FOXN1O15353 AC100797.4-201ENST00000631653 1827 ntBASIC28.86■■■□□ 2.21
FOXN1O15353 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC28.86■■■□□ 2.21
FOXN1O15353 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
FOXN1O15353 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC28.86■■■□□ 2.21
FOXN1O15353 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC28.85■■■□□ 2.21
FOXN1O15353 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC28.85■■■□□ 2.21
FOXN1O15353 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC28.84■■■□□ 2.21
FOXN1O15353 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
FOXN1O15353 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC28.84■■■□□ 2.21
FOXN1O15353 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC28.84■■■□□ 2.21
FOXN1O15353 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC28.84■■■□□ 2.21
FOXN1O15353 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
FOXN1O15353 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC28.84■■■□□ 2.21
FOXN1O15353 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC28.84■■■□□ 2.21
FOXN1O15353 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
FOXN1O15353 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC28.83■■■□□ 2.21
FOXN1O15353 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
FOXN1O15353 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC28.83■■■□□ 2.21
FOXN1O15353 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
FOXN1O15353 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC28.83■■■□□ 2.21
FOXN1O15353 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC28.82■■■□□ 2.2
FOXN1O15353 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC28.82■■■□□ 2.2
FOXN1O15353 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC28.82■■■□□ 2.2
FOXN1O15353 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC28.82■■■□□ 2.2
FOXN1O15353 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
FOXN1O15353 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
FOXN1O15353 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC28.81■■■□□ 2.2
FOXN1O15353 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
FOXN1O15353 MEST-211ENST00000437945 1455 ntTSL 5 BASIC28.81■■■□□ 2.2
FOXN1O15353 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
FOXN1O15353 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
FOXN1O15353 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
FOXN1O15353 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
FOXN1O15353 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC28.81■■■□□ 2.2
FOXN1O15353 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
FOXN1O15353 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC28.81■■■□□ 2.2
FOXN1O15353 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
FOXN1O15353 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC28.81■■■□□ 2.2
FOXN1O15353 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC28.81■■■□□ 2.2
FOXN1O15353 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
FOXN1O15353 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC28.8■■■□□ 2.2
FOXN1O15353 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
FOXN1O15353 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
FOXN1O15353 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
FOXN1O15353 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
FOXN1O15353 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
FOXN1O15353 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC28.8■■■□□ 2.2
FOXN1O15353 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC28.8■■■□□ 2.2
FOXN1O15353 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC28.79■■■□□ 2.2
FOXN1O15353 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC28.79■■■□□ 2.2
FOXN1O15353 PARL-206ENST00000435888 1098 ntTSL 5 BASIC28.79■■■□□ 2.2
FOXN1O15353 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC28.78■■■□□ 2.2
FOXN1O15353 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
FOXN1O15353 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
FOXN1O15353 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
FOXN1O15353 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC28.76■■■□□ 2.2
FOXN1O15353 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
FOXN1O15353 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
FOXN1O15353 LGR4-203ENST00000480977 492 ntTSL 2 BASIC28.76■■■□□ 2.19
FOXN1O15353 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
FOXN1O15353 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC28.76■■■□□ 2.19
FOXN1O15353 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
FOXN1O15353 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC28.75■■■□□ 2.19
FOXN1O15353 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
FOXN1O15353 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC28.75■■■□□ 2.19
FOXN1O15353 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC28.75■■■□□ 2.19
FOXN1O15353 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
FOXN1O15353 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
FOXN1O15353 PROC-203ENST00000409048 1586 ntTSL 5 BASIC28.75■■■□□ 2.19
FOXN1O15353 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC28.75■■■□□ 2.19
FOXN1O15353 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
FOXN1O15353 AC087393.1-201ENST00000582896 145 ntBASIC28.74■■■□□ 2.19
FOXN1O15353 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC28.74■■■□□ 2.19
Retrieved 100 of 98,524 protein–RNA pairs in 1297.5 ms