Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AL359504.2-201ENST00000605506 1601 ntBASIC23.4■■□□□ 1.34
PCDHGA3Q9Y5H0 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC23.39■■□□□ 1.34
PCDHGA3Q9Y5H0 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHGA3Q9Y5H0 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHGA3Q9Y5H0 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
PCDHGA3Q9Y5H0 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.39■■□□□ 1.33
PCDHGA3Q9Y5H0 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHGA3Q9Y5H0 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHGA3Q9Y5H0 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHGA3Q9Y5H0 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHGA3Q9Y5H0 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHGA3Q9Y5H0 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHGA3Q9Y5H0 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
PCDHGA3Q9Y5H0 BEX3-202ENST00000372634 753 ntTSL 2 BASIC23.37■■□□□ 1.33
PCDHGA3Q9Y5H0 YBX1P4-201ENST00000392794 808 ntBASIC23.37■■□□□ 1.33
PCDHGA3Q9Y5H0 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHGA3Q9Y5H0 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHGA3Q9Y5H0 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHGA3Q9Y5H0 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHGA3Q9Y5H0 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.36■■□□□ 1.33
PCDHGA3Q9Y5H0 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHGA3Q9Y5H0 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHGA3Q9Y5H0 AC103834.1-201ENST00000520383 144 ntBASIC23.36■■□□□ 1.33
PCDHGA3Q9Y5H0 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.36■■□□□ 1.33
PCDHGA3Q9Y5H0 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHGA3Q9Y5H0 KRT8P33-201ENST00000508125 1423 ntBASIC23.35■■□□□ 1.33
PCDHGA3Q9Y5H0 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHGA3Q9Y5H0 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHGA3Q9Y5H0 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHGA3Q9Y5H0 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHGA3Q9Y5H0 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHGA3Q9Y5H0 WHAMMP3-201ENST00000611636 1609 ntBASIC23.34■■□□□ 1.33
PCDHGA3Q9Y5H0 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
PCDHGA3Q9Y5H0 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHGA3Q9Y5H0 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHGA3Q9Y5H0 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHGA3Q9Y5H0 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHGA3Q9Y5H0 MIR4508-201ENST00000584178 70 ntBASIC23.33■■□□□ 1.33
PCDHGA3Q9Y5H0 PVT1_1.1-201ENST00000615125 194 ntBASIC23.33■■□□□ 1.33
PCDHGA3Q9Y5H0 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.32■■□□□ 1.32
PCDHGA3Q9Y5H0 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHGA3Q9Y5H0 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC23.32■■□□□ 1.32
PCDHGA3Q9Y5H0 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC23.32■■□□□ 1.32
PCDHGA3Q9Y5H0 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC23.32■■□□□ 1.32
PCDHGA3Q9Y5H0 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHGA3Q9Y5H0 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
PCDHGA3Q9Y5H0 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHGA3Q9Y5H0 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHGA3Q9Y5H0 IDNK-201ENST00000376417 511 ntTSL 5 BASIC23.31■■□□□ 1.32
PCDHGA3Q9Y5H0 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHGA3Q9Y5H0 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHGA3Q9Y5H0 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.31■■□□□ 1.32
PCDHGA3Q9Y5H0 AC009299.2-201ENST00000482477 511 ntBASIC23.31■■□□□ 1.32
PCDHGA3Q9Y5H0 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
PCDHGA3Q9Y5H0 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
PCDHGA3Q9Y5H0 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHGA3Q9Y5H0 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHGA3Q9Y5H0 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHGA3Q9Y5H0 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.3■■□□□ 1.32
PCDHGA3Q9Y5H0 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHGA3Q9Y5H0 MTX2-204ENST00000443241 799 ntTSL 3 BASIC23.3■■□□□ 1.32
PCDHGA3Q9Y5H0 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC23.3■■□□□ 1.32
PCDHGA3Q9Y5H0 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC23.3■■□□□ 1.32
PCDHGA3Q9Y5H0 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHGA3Q9Y5H0 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHGA3Q9Y5H0 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHGA3Q9Y5H0 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHGA3Q9Y5H0 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHGA3Q9Y5H0 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHGA3Q9Y5H0 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC23.29■■□□□ 1.32
PCDHGA3Q9Y5H0 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHGA3Q9Y5H0 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.29■■□□□ 1.32
PCDHGA3Q9Y5H0 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHGA3Q9Y5H0 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHGA3Q9Y5H0 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHGA3Q9Y5H0 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC23.28■■□□□ 1.32
PCDHGA3Q9Y5H0 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHGA3Q9Y5H0 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHGA3Q9Y5H0 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.28■■□□□ 1.32
PCDHGA3Q9Y5H0 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.27■■□□□ 1.32
PCDHGA3Q9Y5H0 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHGA3Q9Y5H0 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHGA3Q9Y5H0 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHGA3Q9Y5H0 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHGA3Q9Y5H0 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHGA3Q9Y5H0 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
PCDHGA3Q9Y5H0 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.26■■□□□ 1.31
PCDHGA3Q9Y5H0 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
PCDHGA3Q9Y5H0 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHGA3Q9Y5H0 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHGA3Q9Y5H0 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC23.26■■□□□ 1.31
PCDHGA3Q9Y5H0 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
PCDHGA3Q9Y5H0 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHGA3Q9Y5H0 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHGA3Q9Y5H0 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHGA3Q9Y5H0 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHGA3Q9Y5H0 AC019171.1-201ENST00000601251 1056 ntBASIC23.25■■□□□ 1.31
PCDHGA3Q9Y5H0 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.25■■□□□ 1.31
PCDHGA3Q9Y5H0 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
PCDHGA3Q9Y5H0 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms