Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC28.99■■■□□ 2.23
DDX4Q9NQI0 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
DDX4Q9NQI0 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC28.99■■■□□ 2.23
DDX4Q9NQI0 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
DDX4Q9NQI0 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
DDX4Q9NQI0 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
DDX4Q9NQI0 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC28.98■■■□□ 2.23
DDX4Q9NQI0 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
DDX4Q9NQI0 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
DDX4Q9NQI0 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC28.97■■■□□ 2.23
DDX4Q9NQI0 MTX2-204ENST00000443241 799 ntTSL 3 BASIC28.97■■■□□ 2.23
DDX4Q9NQI0 RPS2P7-201ENST00000447334 885 ntBASIC28.97■■■□□ 2.23
DDX4Q9NQI0 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
DDX4Q9NQI0 AC103724.3-201ENST00000564481 992 ntBASIC28.97■■■□□ 2.23
DDX4Q9NQI0 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC28.97■■■□□ 2.23
DDX4Q9NQI0 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
DDX4Q9NQI0 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
DDX4Q9NQI0 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
DDX4Q9NQI0 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
DDX4Q9NQI0 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
DDX4Q9NQI0 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
DDX4Q9NQI0 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC28.96■■■□□ 2.23
DDX4Q9NQI0 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
DDX4Q9NQI0 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
DDX4Q9NQI0 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
DDX4Q9NQI0 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
DDX4Q9NQI0 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
DDX4Q9NQI0 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
DDX4Q9NQI0 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC28.94■■■□□ 2.22
DDX4Q9NQI0 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
DDX4Q9NQI0 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
DDX4Q9NQI0 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC28.93■■■□□ 2.22
DDX4Q9NQI0 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
DDX4Q9NQI0 AC019171.1-201ENST00000601251 1056 ntBASIC28.93■■■□□ 2.22
DDX4Q9NQI0 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC28.93■■■□□ 2.22
DDX4Q9NQI0 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
DDX4Q9NQI0 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC28.93■■■□□ 2.22
DDX4Q9NQI0 AC142472.1-201ENST00000612013 1741 ntBASIC28.92■■■□□ 2.22
DDX4Q9NQI0 SHF-206ENST00000560471 2499 ntTSL 5 BASIC28.92■■■□□ 2.22
DDX4Q9NQI0 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
DDX4Q9NQI0 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC28.92■■■□□ 2.22
DDX4Q9NQI0 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
DDX4Q9NQI0 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
DDX4Q9NQI0 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
DDX4Q9NQI0 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
DDX4Q9NQI0 LONRF2P2-201ENST00000439212 571 ntBASIC28.91■■■□□ 2.22
DDX4Q9NQI0 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
DDX4Q9NQI0 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
DDX4Q9NQI0 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
DDX4Q9NQI0 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC28.9■■■□□ 2.22
DDX4Q9NQI0 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC28.9■■■□□ 2.22
DDX4Q9NQI0 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
DDX4Q9NQI0 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
DDX4Q9NQI0 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC28.89■■■□□ 2.22
DDX4Q9NQI0 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC28.89■■■□□ 2.22
DDX4Q9NQI0 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC28.88■■■□□ 2.21
DDX4Q9NQI0 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC28.88■■■□□ 2.21
DDX4Q9NQI0 PRTG-204ENST00000561292 833 ntTSL 3 BASIC28.88■■■□□ 2.21
DDX4Q9NQI0 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
DDX4Q9NQI0 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
DDX4Q9NQI0 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC28.87■■■□□ 2.21
DDX4Q9NQI0 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
DDX4Q9NQI0 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
DDX4Q9NQI0 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC28.87■■■□□ 2.21
DDX4Q9NQI0 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
DDX4Q9NQI0 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC28.87■■■□□ 2.21
DDX4Q9NQI0 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC28.86■■■□□ 2.21
DDX4Q9NQI0 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC28.86■■■□□ 2.21
DDX4Q9NQI0 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC28.86■■■□□ 2.21
DDX4Q9NQI0 AL031848.2-201ENST00000607670 837 ntBASIC28.86■■■□□ 2.21
DDX4Q9NQI0 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
DDX4Q9NQI0 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC28.86■■■□□ 2.21
DDX4Q9NQI0 AC142086.6-201ENST00000621154 1765 ntBASIC28.85■■■□□ 2.21
DDX4Q9NQI0 AP004609.3-201ENST00000610705 1884 ntBASIC28.85■■■□□ 2.21
DDX4Q9NQI0 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC28.85■■■□□ 2.21
DDX4Q9NQI0 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
DDX4Q9NQI0 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
DDX4Q9NQI0 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
DDX4Q9NQI0 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC28.84■■■□□ 2.21
DDX4Q9NQI0 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC28.84■■■□□ 2.21
DDX4Q9NQI0 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC28.84■■■□□ 2.21
DDX4Q9NQI0 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
DDX4Q9NQI0 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
DDX4Q9NQI0 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC28.83■■■□□ 2.21
DDX4Q9NQI0 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
DDX4Q9NQI0 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC28.83■■■□□ 2.21
DDX4Q9NQI0 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC28.82■■■□□ 2.2
DDX4Q9NQI0 HES6-204ENST00000409182 863 ntTSL 2 BASIC28.82■■■□□ 2.2
DDX4Q9NQI0 OR2A1-AS1-204ENST00000470435 602 ntBASIC28.82■■■□□ 2.2
DDX4Q9NQI0 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC28.82■■■□□ 2.2
DDX4Q9NQI0 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
DDX4Q9NQI0 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
DDX4Q9NQI0 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC28.81■■■□□ 2.2
DDX4Q9NQI0 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC28.81■■■□□ 2.2
DDX4Q9NQI0 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC28.81■■■□□ 2.2
DDX4Q9NQI0 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
DDX4Q9NQI0 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
DDX4Q9NQI0 GUSBP5-201ENST00000418136 578 ntBASIC28.8■■■□□ 2.2
DDX4Q9NQI0 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
DDX4Q9NQI0 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC28.8■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms