Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC23.24■■□□□ 1.31
CHD8Q9HCK8 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC23.23■■□□□ 1.31
CHD8Q9HCK8 AC097381.1-201ENST00000429019 1296 ntBASIC23.23■■□□□ 1.31
CHD8Q9HCK8 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CHD8Q9HCK8 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
CHD8Q9HCK8 KRT18P24-201ENST00000344739 1156 ntBASIC23.23■■□□□ 1.31
CHD8Q9HCK8 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CHD8Q9HCK8 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
CHD8Q9HCK8 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CHD8Q9HCK8 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CHD8Q9HCK8 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.22■■□□□ 1.31
CHD8Q9HCK8 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CHD8Q9HCK8 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CHD8Q9HCK8 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC23.21■■□□□ 1.31
CHD8Q9HCK8 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CHD8Q9HCK8 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
CHD8Q9HCK8 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.2■■□□□ 1.31
CHD8Q9HCK8 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CHD8Q9HCK8 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC23.2■■□□□ 1.3
CHD8Q9HCK8 PLD4-205ENST00000553861 667 ntTSL 2 BASIC23.2■■□□□ 1.3
CHD8Q9HCK8 RARRES2P11-201ENST00000635158 484 ntBASIC23.2■■□□□ 1.3
CHD8Q9HCK8 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.2■■□□□ 1.3
CHD8Q9HCK8 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CHD8Q9HCK8 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC23.19■■□□□ 1.3
CHD8Q9HCK8 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CHD8Q9HCK8 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CHD8Q9HCK8 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.19■■□□□ 1.3
CHD8Q9HCK8 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC23.19■■□□□ 1.3
CHD8Q9HCK8 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.19■■□□□ 1.3
CHD8Q9HCK8 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.18■■□□□ 1.3
CHD8Q9HCK8 AL356740.2-201ENST00000601559 647 ntBASIC23.18■■□□□ 1.3
CHD8Q9HCK8 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CHD8Q9HCK8 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CHD8Q9HCK8 PBX2P1-201ENST00000493219 1291 ntBASIC23.18■■□□□ 1.3
CHD8Q9HCK8 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC23.18■■□□□ 1.3
CHD8Q9HCK8 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CHD8Q9HCK8 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.18■■□□□ 1.3
CHD8Q9HCK8 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CHD8Q9HCK8 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CHD8Q9HCK8 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CHD8Q9HCK8 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CHD8Q9HCK8 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.16■■□□□ 1.3
CHD8Q9HCK8 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
CHD8Q9HCK8 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CHD8Q9HCK8 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CHD8Q9HCK8 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CHD8Q9HCK8 HYI-206ENST00000372434 1025 ntTSL 5 BASIC23.15■■□□□ 1.3
CHD8Q9HCK8 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC23.15■■□□□ 1.3
CHD8Q9HCK8 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC23.14■■□□□ 1.3
CHD8Q9HCK8 MIR6724-1-201ENST00000616420 92 ntBASIC23.14■■□□□ 1.3
CHD8Q9HCK8 MIR6724-2-201ENST00000616483 92 ntBASIC23.14■■□□□ 1.3
CHD8Q9HCK8 MIR6724-4-201ENST00000617390 92 ntBASIC23.14■■□□□ 1.3
CHD8Q9HCK8 MIR6724-3-201ENST00000622482 92 ntBASIC23.14■■□□□ 1.3
CHD8Q9HCK8 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.14■■□□□ 1.3
CHD8Q9HCK8 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.14■■□□□ 1.29
CHD8Q9HCK8 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC23.14■■□□□ 1.29
CHD8Q9HCK8 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CHD8Q9HCK8 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CHD8Q9HCK8 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.13■■□□□ 1.29
CHD8Q9HCK8 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CHD8Q9HCK8 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.13■■□□□ 1.29
CHD8Q9HCK8 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC23.12■■□□□ 1.29
CHD8Q9HCK8 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
CHD8Q9HCK8 AC105265.2-201ENST00000467189 838 ntBASIC23.12■■□□□ 1.29
CHD8Q9HCK8 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CHD8Q9HCK8 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
CHD8Q9HCK8 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CHD8Q9HCK8 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.12■■□□□ 1.29
CHD8Q9HCK8 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.11■■□□□ 1.29
CHD8Q9HCK8 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC23.11■■□□□ 1.29
CHD8Q9HCK8 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
CHD8Q9HCK8 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC23.11■■□□□ 1.29
CHD8Q9HCK8 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CHD8Q9HCK8 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.1■■□□□ 1.29
CHD8Q9HCK8 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.1■■□□□ 1.29
CHD8Q9HCK8 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CHD8Q9HCK8 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC23.1■■□□□ 1.29
CHD8Q9HCK8 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CHD8Q9HCK8 AC010997.5-201ENST00000609182 354 ntBASIC23.1■■□□□ 1.29
CHD8Q9HCK8 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
CHD8Q9HCK8 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC23.09■■□□□ 1.29
CHD8Q9HCK8 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC23.08■■□□□ 1.29
CHD8Q9HCK8 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CHD8Q9HCK8 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
CHD8Q9HCK8 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CHD8Q9HCK8 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.08■■□□□ 1.29
CHD8Q9HCK8 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.08■■□□□ 1.29
CHD8Q9HCK8 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CHD8Q9HCK8 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CHD8Q9HCK8 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
CHD8Q9HCK8 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
CHD8Q9HCK8 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.08■■□□□ 1.29
CHD8Q9HCK8 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.07■■□□□ 1.28
CHD8Q9HCK8 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.07■■□□□ 1.28
CHD8Q9HCK8 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CHD8Q9HCK8 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC23.07■■□□□ 1.28
CHD8Q9HCK8 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CHD8Q9HCK8 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC23.07■■□□□ 1.28
CHD8Q9HCK8 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
CHD8Q9HCK8 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms