Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CDH23Q9H251 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC26.26■■□□□ 1.79
CDH23Q9H251 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CDH23Q9H251 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CDH23Q9H251 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CDH23Q9H251 AL117332.1-201ENST00000622628 974 ntBASIC26.25■■□□□ 1.79
CDH23Q9H251 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC26.24■■□□□ 1.79
CDH23Q9H251 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC26.24■■□□□ 1.79
CDH23Q9H251 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC26.24■■□□□ 1.79
CDH23Q9H251 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC26.24■■□□□ 1.79
CDH23Q9H251 AC135279.3-201ENST00000610945 1311 ntBASIC26.24■■□□□ 1.79
CDH23Q9H251 RPP21-222ENST00000433076 577 ntTSL 2 BASIC26.24■■□□□ 1.79
CDH23Q9H251 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CDH23Q9H251 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC26.23■■□□□ 1.79
CDH23Q9H251 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CDH23Q9H251 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC26.23■■□□□ 1.79
CDH23Q9H251 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC26.23■■□□□ 1.79
CDH23Q9H251 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.23■■□□□ 1.79
CDH23Q9H251 EBPL-204ENST00000378272 766 ntTSL 3 BASIC26.23■■□□□ 1.79
CDH23Q9H251 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
CDH23Q9H251 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
CDH23Q9H251 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC26.22■■□□□ 1.79
CDH23Q9H251 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
CDH23Q9H251 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC26.21■■□□□ 1.79
CDH23Q9H251 RPS2P7-201ENST00000447334 885 ntBASIC26.21■■□□□ 1.79
CDH23Q9H251 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CDH23Q9H251 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC26.21■■□□□ 1.79
CDH23Q9H251 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC26.21■■□□□ 1.79
CDH23Q9H251 TSPY9P-201ENST00000440215 945 ntBASIC26.21■■□□□ 1.79
CDH23Q9H251 TSPY11P-201ENST00000442607 1045 ntBASIC26.21■■□□□ 1.79
CDH23Q9H251 AC022616.5-201ENST00000518796 181 ntBASIC26.21■■□□□ 1.79
CDH23Q9H251 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CDH23Q9H251 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
CDH23Q9H251 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CDH23Q9H251 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC26.2■■□□□ 1.78
CDH23Q9H251 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC26.2■■□□□ 1.78
CDH23Q9H251 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
CDH23Q9H251 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CDH23Q9H251 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CDH23Q9H251 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
CDH23Q9H251 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
CDH23Q9H251 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
CDH23Q9H251 AC021242.3-201ENST00000607598 1377 ntBASIC26.19■■□□□ 1.78
CDH23Q9H251 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC26.19■■□□□ 1.78
CDH23Q9H251 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
CDH23Q9H251 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CDH23Q9H251 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC26.18■■□□□ 1.78
CDH23Q9H251 SRR-208ENST00000576848 588 ntTSL 4 BASIC26.18■■□□□ 1.78
CDH23Q9H251 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
CDH23Q9H251 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC26.18■■□□□ 1.78
CDH23Q9H251 AC092028.1-203ENST00000608262 953 ntBASIC26.18■■□□□ 1.78
CDH23Q9H251 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CDH23Q9H251 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC26.17■■□□□ 1.78
CDH23Q9H251 AL512631.2-201ENST00000604634 923 ntBASIC26.17■■□□□ 1.78
CDH23Q9H251 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
CDH23Q9H251 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC26.17■■□□□ 1.78
CDH23Q9H251 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CDH23Q9H251 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC26.17■■□□□ 1.78
CDH23Q9H251 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC26.17■■□□□ 1.78
CDH23Q9H251 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CDH23Q9H251 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CDH23Q9H251 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CDH23Q9H251 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC26.16■■□□□ 1.78
CDH23Q9H251 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.16■■□□□ 1.78
CDH23Q9H251 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CDH23Q9H251 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC26.15■■□□□ 1.78
CDH23Q9H251 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC26.15■■□□□ 1.78
CDH23Q9H251 AL139393.2-201ENST00000608721 2025 ntBASIC26.15■■□□□ 1.78
CDH23Q9H251 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC26.15■■□□□ 1.78
CDH23Q9H251 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC26.15■■□□□ 1.78
CDH23Q9H251 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
CDH23Q9H251 TK2-202ENST00000417693 1046 ntTSL 2 BASIC26.14■■□□□ 1.78
CDH23Q9H251 MIR3621-201ENST00000580529 85 ntBASIC26.14■■□□□ 1.78
CDH23Q9H251 AL031432.3-201ENST00000607698 485 ntBASIC26.14■■□□□ 1.78
CDH23Q9H251 AC137630.3-201ENST00000607245 391 ntBASIC26.14■■□□□ 1.77
CDH23Q9H251 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
CDH23Q9H251 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC26.13■■□□□ 1.77
CDH23Q9H251 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
CDH23Q9H251 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CDH23Q9H251 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
CDH23Q9H251 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CDH23Q9H251 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CDH23Q9H251 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC26.12■■□□□ 1.77
CDH23Q9H251 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC26.12■■□□□ 1.77
CDH23Q9H251 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
CDH23Q9H251 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CDH23Q9H251 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CDH23Q9H251 SUDS3P1-201ENST00000505831 966 ntBASIC26.11■■□□□ 1.77
CDH23Q9H251 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
CDH23Q9H251 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CDH23Q9H251 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CDH23Q9H251 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC26.1■■□□□ 1.77
CDH23Q9H251 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC26.1■■□□□ 1.77
CDH23Q9H251 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CDH23Q9H251 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
CDH23Q9H251 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC26.09■■□□□ 1.77
CDH23Q9H251 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CDH23Q9H251 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CDH23Q9H251 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CDH23Q9H251 QDPR-206ENST00000508623 601 ntTSL 3 BASIC26.09■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms