Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.37■□□□□ 0.85
ALX4Q9H161 AC068473.5-201ENST00000616428 2072 ntBASIC20.37■□□□□ 0.85
ALX4Q9H161 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.37■□□□□ 0.85
ALX4Q9H161 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ALX4Q9H161 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ALX4Q9H161 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ALX4Q9H161 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.37■□□□□ 0.85
ALX4Q9H161 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ALX4Q9H161 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ALX4Q9H161 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ALX4Q9H161 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.36■□□□□ 0.85
ALX4Q9H161 AC079834.2-201ENST00000609776 1949 ntBASIC20.36■□□□□ 0.85
ALX4Q9H161 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
ALX4Q9H161 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ALX4Q9H161 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ALX4Q9H161 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ALX4Q9H161 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ALX4Q9H161 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.35■□□□□ 0.85
ALX4Q9H161 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
ALX4Q9H161 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.35■□□□□ 0.85
ALX4Q9H161 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.35■□□□□ 0.85
ALX4Q9H161 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ALX4Q9H161 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ALX4Q9H161 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.34■□□□□ 0.85
ALX4Q9H161 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
ALX4Q9H161 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.34■□□□□ 0.85
ALX4Q9H161 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ALX4Q9H161 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ALX4Q9H161 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ALX4Q9H161 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
ALX4Q9H161 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ALX4Q9H161 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ALX4Q9H161 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ALX4Q9H161 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
ALX4Q9H161 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ALX4Q9H161 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ALX4Q9H161 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ALX4Q9H161 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ALX4Q9H161 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
ALX4Q9H161 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
ALX4Q9H161 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ALX4Q9H161 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.32■□□□□ 0.84
ALX4Q9H161 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
ALX4Q9H161 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.32■□□□□ 0.84
ALX4Q9H161 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ALX4Q9H161 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ALX4Q9H161 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.31■□□□□ 0.84
ALX4Q9H161 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.31■□□□□ 0.84
ALX4Q9H161 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.31■□□□□ 0.84
ALX4Q9H161 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ALX4Q9H161 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ALX4Q9H161 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ALX4Q9H161 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.3■□□□□ 0.84
ALX4Q9H161 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ALX4Q9H161 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.3■□□□□ 0.84
ALX4Q9H161 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.3■□□□□ 0.84
ALX4Q9H161 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ALX4Q9H161 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ALX4Q9H161 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.3■□□□□ 0.84
ALX4Q9H161 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
ALX4Q9H161 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ALX4Q9H161 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.29■□□□□ 0.84
ALX4Q9H161 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ALX4Q9H161 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
ALX4Q9H161 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.29■□□□□ 0.84
ALX4Q9H161 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ALX4Q9H161 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ALX4Q9H161 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ALX4Q9H161 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.28■□□□□ 0.84
ALX4Q9H161 ABHD17AP4-201ENST00000411545 909 ntBASIC20.28■□□□□ 0.84
ALX4Q9H161 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.28■□□□□ 0.84
ALX4Q9H161 DUX4L29-201ENST00000425409 679 ntBASIC20.28■□□□□ 0.84
ALX4Q9H161 AC021231.2-201ENST00000594613 730 ntBASIC20.28■□□□□ 0.84
ALX4Q9H161 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.28■□□□□ 0.84
ALX4Q9H161 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ALX4Q9H161 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ALX4Q9H161 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ALX4Q9H161 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
ALX4Q9H161 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
ALX4Q9H161 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ALX4Q9H161 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ALX4Q9H161 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ALX4Q9H161 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
ALX4Q9H161 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ALX4Q9H161 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
ALX4Q9H161 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
ALX4Q9H161 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.27■□□□□ 0.84
ALX4Q9H161 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
ALX4Q9H161 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
ALX4Q9H161 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ALX4Q9H161 AC097639.1-201ENST00000565519 1891 ntBASIC20.26■□□□□ 0.83
ALX4Q9H161 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.26■□□□□ 0.83
ALX4Q9H161 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.26■□□□□ 0.83
ALX4Q9H161 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.26■□□□□ 0.83
ALX4Q9H161 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ALX4Q9H161 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
ALX4Q9H161 LINC00273-201ENST00000539813 1452 ntBASIC20.25■□□□□ 0.83
ALX4Q9H161 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ALX4Q9H161 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ALX4Q9H161 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms