Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
RNF2Q99496 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF2Q99496 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.07■□□□□ 0.64
RNF2Q99496 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF2Q99496 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF2Q99496 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
RNF2Q99496 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.06■□□□□ 0.64
RNF2Q99496 PVT1-219ENST00000523427 938 ntTSL 3 BASIC19.06■□□□□ 0.64
RNF2Q99496 MIR3648-2-201ENST00000581792 180 ntBASIC19.06■□□□□ 0.64
RNF2Q99496 MIR3648-1-201ENST00000615959 180 ntBASIC19.06■□□□□ 0.64
RNF2Q99496 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.06■□□□□ 0.64
RNF2Q99496 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF2Q99496 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
RNF2Q99496 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.05■□□□□ 0.64
RNF2Q99496 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RNF2Q99496 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF2Q99496 AC010501.1-201ENST00000606270 1962 ntBASIC19.04■□□□□ 0.64
RNF2Q99496 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF2Q99496 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF2Q99496 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RNF2Q99496 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF2Q99496 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.04■□□□□ 0.64
RNF2Q99496 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF2Q99496 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF2Q99496 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF2Q99496 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.03■□□□□ 0.64
RNF2Q99496 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.02■□□□□ 0.64
RNF2Q99496 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
RNF2Q99496 AC142381.3-201ENST00000568208 1670 ntBASIC19.02■□□□□ 0.64
RNF2Q99496 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.02■□□□□ 0.64
RNF2Q99496 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF2Q99496 AC008813.1-201ENST00000536597 885 ntBASIC19.02■□□□□ 0.64
RNF2Q99496 AC016575.1-201ENST00000607026 382 ntBASIC19.02■□□□□ 0.64
RNF2Q99496 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RNF2Q99496 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.63
RNF2Q99496 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC19.02■□□□□ 0.63
RNF2Q99496 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RNF2Q99496 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF2Q99496 ERN1-208ENST00000606895 2068 ntBASIC19.01■□□□□ 0.63
RNF2Q99496 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF2Q99496 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RNF2Q99496 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.01■□□□□ 0.63
RNF2Q99496 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF2Q99496 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF2Q99496 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
RNF2Q99496 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF2Q99496 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF2Q99496 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF2Q99496 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF2Q99496 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF2Q99496 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF2Q99496 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF2Q99496 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC18.99■□□□□ 0.63
RNF2Q99496 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF2Q99496 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
RNF2Q99496 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF2Q99496 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF2Q99496 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF2Q99496 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF2Q99496 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF2Q99496 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF2Q99496 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RNF2Q99496 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF2Q99496 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
RNF2Q99496 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
RNF2Q99496 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
RNF2Q99496 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF2Q99496 HLA-V-202ENST00000446817 847 ntBASIC18.96■□□□□ 0.63
RNF2Q99496 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF2Q99496 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RNF2Q99496 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF2Q99496 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF2Q99496 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
RNF2Q99496 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNF2Q99496 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC18.95■□□□□ 0.62
RNF2Q99496 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC18.95■□□□□ 0.62
RNF2Q99496 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF2Q99496 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF2Q99496 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
RNF2Q99496 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNF2Q99496 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RNF2Q99496 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF2Q99496 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF2Q99496 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF2Q99496 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC18.94■□□□□ 0.62
RNF2Q99496 METRNL-202ENST00000570778 967 ntTSL 5 BASIC18.94■□□□□ 0.62
RNF2Q99496 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RNF2Q99496 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF2Q99496 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF2Q99496 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RNF2Q99496 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF2Q99496 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF2Q99496 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF2Q99496 MIR219A2-201ENST00000608502 1504 ntBASIC18.93■□□□□ 0.62
RNF2Q99496 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF2Q99496 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF2Q99496 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF2Q99496 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF2Q99496 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC18.92■□□□□ 0.62
RNF2Q99496 CHST11-203ENST00000547956 936 ntTSL 2 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms