Protein–RNA interactions for Protein: Q8N556

AFAP1, Actin filament-associated protein 1, humanhuman

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AFAP1Q8N556 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC37.06■■■■□ 3.52
AFAP1Q8N556 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC37.05■■■■□ 3.52
AFAP1Q8N556 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC37.05■■■■□ 3.52
AFAP1Q8N556 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC37.05■■■■□ 3.52
AFAP1Q8N556 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC37.05■■■■□ 3.52
AFAP1Q8N556 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC37.05■■■■□ 3.52
AFAP1Q8N556 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC37.04■■■■□ 3.52
AFAP1Q8N556 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC37.04■■■■□ 3.52
AFAP1Q8N556 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC37.03■■■■□ 3.52
AFAP1Q8N556 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC37.02■■■■□ 3.52
AFAP1Q8N556 BX664725.1-201ENST00000438252 379 ntBASIC37.02■■■■□ 3.52
AFAP1Q8N556 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC37.02■■■■□ 3.52
AFAP1Q8N556 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC37.02■■■■□ 3.52
AFAP1Q8N556 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC37.01■■■■□ 3.52
AFAP1Q8N556 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC37■■■■□ 3.51
AFAP1Q8N556 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC37■■■■□ 3.51
AFAP1Q8N556 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC36.99■■■■□ 3.51
AFAP1Q8N556 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC36.99■■■■□ 3.51
AFAP1Q8N556 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC36.99■■■■□ 3.51
AFAP1Q8N556 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC36.99■■■■□ 3.51
AFAP1Q8N556 KRT16P3-201ENST00000439127 1283 ntBASIC36.99■■■■□ 3.51
AFAP1Q8N556 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC36.98■■■■□ 3.51
AFAP1Q8N556 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC36.98■■■■□ 3.51
AFAP1Q8N556 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC36.97■■■■□ 3.51
AFAP1Q8N556 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC36.97■■■■□ 3.51
AFAP1Q8N556 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC36.96■■■■□ 3.51
AFAP1Q8N556 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC36.96■■■■□ 3.51
AFAP1Q8N556 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC36.95■■■■□ 3.51
AFAP1Q8N556 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC36.95■■■■□ 3.51
AFAP1Q8N556 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC36.94■■■■□ 3.5
AFAP1Q8N556 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC36.94■■■■□ 3.5
AFAP1Q8N556 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC36.94■■■■□ 3.5
AFAP1Q8N556 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC36.94■■■■□ 3.5
AFAP1Q8N556 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC36.93■■■■□ 3.5
AFAP1Q8N556 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC36.93■■■■□ 3.5
AFAP1Q8N556 KRT18P24-201ENST00000344739 1156 ntBASIC36.93■■■■□ 3.5
AFAP1Q8N556 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC36.92■■■■□ 3.5
AFAP1Q8N556 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC36.92■■■■□ 3.5
AFAP1Q8N556 AC022616.5-201ENST00000518796 181 ntBASIC36.92■■■■□ 3.5
AFAP1Q8N556 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC36.92■■■■□ 3.5
AFAP1Q8N556 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC36.91■■■■□ 3.5
AFAP1Q8N556 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC36.91■■■■□ 3.5
AFAP1Q8N556 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC36.9■■■■□ 3.5
AFAP1Q8N556 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC36.9■■■■□ 3.5
AFAP1Q8N556 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC36.9■■■■□ 3.5
AFAP1Q8N556 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC36.89■■■■□ 3.5
AFAP1Q8N556 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC36.89■■■■□ 3.5
AFAP1Q8N556 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC36.89■■■■□ 3.5
AFAP1Q8N556 AC137630.3-201ENST00000607245 391 ntBASIC36.89■■■■□ 3.5
AFAP1Q8N556 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC36.89■■■■□ 3.5
AFAP1Q8N556 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC36.88■■■■□ 3.49
AFAP1Q8N556 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC36.88■■■■□ 3.49
AFAP1Q8N556 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC36.88■■■■□ 3.49
AFAP1Q8N556 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC36.88■■■■□ 3.49
AFAP1Q8N556 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC36.87■■■■□ 3.49
AFAP1Q8N556 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC36.87■■■■□ 3.49
AFAP1Q8N556 AL139246.5-201ENST00000606645 996 ntBASIC36.87■■■■□ 3.49
AFAP1Q8N556 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC36.86■■■■□ 3.49
AFAP1Q8N556 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC36.86■■■■□ 3.49
AFAP1Q8N556 TSPY9P-201ENST00000440215 945 ntBASIC36.86■■■■□ 3.49
AFAP1Q8N556 TSPY11P-201ENST00000442607 1045 ntBASIC36.86■■■■□ 3.49
AFAP1Q8N556 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC36.86■■■■□ 3.49
AFAP1Q8N556 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC36.86■■■■□ 3.49
AFAP1Q8N556 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC36.86■■■■□ 3.49
AFAP1Q8N556 RALB-208ENST00000631312 311 ntTSL 5 BASIC36.86■■■■□ 3.49
AFAP1Q8N556 AC021242.3-201ENST00000607598 1377 ntBASIC36.86■■■■□ 3.49
AFAP1Q8N556 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC36.85■■■■□ 3.49
AFAP1Q8N556 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC36.85■■■■□ 3.49
AFAP1Q8N556 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC36.85■■■■□ 3.49
AFAP1Q8N556 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC36.84■■■■□ 3.49
AFAP1Q8N556 AC131281.2-201ENST00000520478 145 ntBASIC36.83■■■■□ 3.49
AFAP1Q8N556 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC36.83■■■■□ 3.49
AFAP1Q8N556 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC36.82■■■■□ 3.49
AFAP1Q8N556 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC36.82■■■■□ 3.49
AFAP1Q8N556 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC36.82■■■■□ 3.49
AFAP1Q8N556 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC36.82■■■■□ 3.48
AFAP1Q8N556 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC36.82■■■■□ 3.48
AFAP1Q8N556 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC36.82■■■■□ 3.48
AFAP1Q8N556 TRIR-202ENST00000588213 841 ntTSL 3 BASIC36.82■■■■□ 3.48
AFAP1Q8N556 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC36.82■■■■□ 3.48
AFAP1Q8N556 NALT1-201ENST00000429224 738 ntTSL 5 BASIC36.81■■■■□ 3.48
AFAP1Q8N556 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC36.81■■■■□ 3.48
AFAP1Q8N556 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC36.81■■■■□ 3.48
AFAP1Q8N556 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC36.8■■■■□ 3.48
AFAP1Q8N556 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC36.8■■■■□ 3.48
AFAP1Q8N556 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC36.8■■■■□ 3.48
AFAP1Q8N556 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC36.8■■■■□ 3.48
AFAP1Q8N556 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC36.8■■■■□ 3.48
AFAP1Q8N556 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC36.8■■■■□ 3.48
AFAP1Q8N556 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC36.8■■■■□ 3.48
AFAP1Q8N556 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC36.79■■■■□ 3.48
AFAP1Q8N556 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC36.79■■■■□ 3.48
AFAP1Q8N556 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC36.79■■■■□ 3.48
AFAP1Q8N556 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC36.78■■■■□ 3.48
AFAP1Q8N556 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC36.78■■■■□ 3.48
AFAP1Q8N556 AC120024.1-201ENST00000562672 995 ntBASIC36.78■■■■□ 3.48
AFAP1Q8N556 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC36.78■■■■□ 3.48
AFAP1Q8N556 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC36.78■■■■□ 3.48
AFAP1Q8N556 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC36.77■■■■□ 3.48
AFAP1Q8N556 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC36.77■■■■□ 3.48
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms