Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 KRT125P-201ENST00000546827 989 ntBASIC30.18■■■□□ 2.42
SLX4Q8IY92 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC30.18■■■□□ 2.42
SLX4Q8IY92 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
SLX4Q8IY92 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
SLX4Q8IY92 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
SLX4Q8IY92 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC30.17■■■□□ 2.42
SLX4Q8IY92 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC30.16■■■□□ 2.42
SLX4Q8IY92 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC30.16■■■□□ 2.42
SLX4Q8IY92 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC30.16■■■□□ 2.42
SLX4Q8IY92 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC30.15■■■□□ 2.42
SLX4Q8IY92 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
SLX4Q8IY92 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
SLX4Q8IY92 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC30.15■■■□□ 2.42
SLX4Q8IY92 AC131281.2-201ENST00000520478 145 ntBASIC30.15■■■□□ 2.42
SLX4Q8IY92 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
SLX4Q8IY92 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
SLX4Q8IY92 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC30.14■■■□□ 2.42
SLX4Q8IY92 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC30.14■■■□□ 2.42
SLX4Q8IY92 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC30.14■■■□□ 2.42
SLX4Q8IY92 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
SLX4Q8IY92 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
SLX4Q8IY92 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC30.14■■■□□ 2.41
SLX4Q8IY92 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
SLX4Q8IY92 AC022616.5-201ENST00000518796 181 ntBASIC30.12■■■□□ 2.41
SLX4Q8IY92 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC30.12■■■□□ 2.41
SLX4Q8IY92 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC30.12■■■□□ 2.41
SLX4Q8IY92 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC30.12■■■□□ 2.41
SLX4Q8IY92 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
SLX4Q8IY92 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC30.12■■■□□ 2.41
SLX4Q8IY92 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC30.12■■■□□ 2.41
SLX4Q8IY92 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
SLX4Q8IY92 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
SLX4Q8IY92 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
SLX4Q8IY92 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC30.1■■■□□ 2.41
SLX4Q8IY92 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC30.1■■■□□ 2.41
SLX4Q8IY92 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC30.1■■■□□ 2.41
SLX4Q8IY92 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC30.09■■■□□ 2.41
SLX4Q8IY92 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
SLX4Q8IY92 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC30.09■■■□□ 2.41
SLX4Q8IY92 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC30.08■■■□□ 2.41
SLX4Q8IY92 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
SLX4Q8IY92 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC30.08■■■□□ 2.41
SLX4Q8IY92 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
SLX4Q8IY92 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC30.06■■■□□ 2.4
SLX4Q8IY92 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC30.06■■■□□ 2.4
SLX4Q8IY92 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC30.05■■■□□ 2.4
SLX4Q8IY92 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC30.05■■■□□ 2.4
SLX4Q8IY92 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC30.04■■■□□ 2.4
SLX4Q8IY92 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
SLX4Q8IY92 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC30.04■■■□□ 2.4
SLX4Q8IY92 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
SLX4Q8IY92 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
SLX4Q8IY92 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
SLX4Q8IY92 KRT18P24-201ENST00000344739 1156 ntBASIC30.03■■■□□ 2.4
SLX4Q8IY92 AC137630.3-201ENST00000607245 391 ntBASIC30.03■■■□□ 2.4
SLX4Q8IY92 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
SLX4Q8IY92 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
SLX4Q8IY92 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC30.02■■■□□ 2.4
SLX4Q8IY92 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC30.02■■■□□ 2.4
SLX4Q8IY92 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
SLX4Q8IY92 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
SLX4Q8IY92 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC30.02■■■□□ 2.4
SLX4Q8IY92 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
SLX4Q8IY92 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC30.01■■■□□ 2.4
SLX4Q8IY92 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC30.01■■■□□ 2.4
SLX4Q8IY92 TRIR-202ENST00000588213 841 ntTSL 3 BASIC30.01■■■□□ 2.4
SLX4Q8IY92 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC30.01■■■□□ 2.39
SLX4Q8IY92 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
SLX4Q8IY92 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC30.01■■■□□ 2.39
SLX4Q8IY92 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC30.01■■■□□ 2.39
SLX4Q8IY92 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
SLX4Q8IY92 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
SLX4Q8IY92 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC30■■■□□ 2.39
SLX4Q8IY92 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
SLX4Q8IY92 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC29.99■■■□□ 2.39
SLX4Q8IY92 AC021242.3-201ENST00000607598 1377 ntBASIC29.99■■■□□ 2.39
SLX4Q8IY92 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
SLX4Q8IY92 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC29.98■■■□□ 2.39
SLX4Q8IY92 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
SLX4Q8IY92 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC29.98■■■□□ 2.39
SLX4Q8IY92 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
SLX4Q8IY92 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC29.98■■■□□ 2.39
SLX4Q8IY92 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC29.98■■■□□ 2.39
SLX4Q8IY92 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC29.98■■■□□ 2.39
SLX4Q8IY92 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
SLX4Q8IY92 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
SLX4Q8IY92 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC29.97■■■□□ 2.39
SLX4Q8IY92 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC29.97■■■□□ 2.39
SLX4Q8IY92 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
SLX4Q8IY92 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC29.96■■■□□ 2.39
SLX4Q8IY92 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
SLX4Q8IY92 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC29.96■■■□□ 2.39
SLX4Q8IY92 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
SLX4Q8IY92 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC29.96■■■□□ 2.39
SLX4Q8IY92 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC29.96■■■□□ 2.39
SLX4Q8IY92 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
SLX4Q8IY92 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
SLX4Q8IY92 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
SLX4Q8IY92 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC29.95■■■□□ 2.39
SLX4Q8IY92 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC29.95■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms