Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
TRIM42Q8IWZ5 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.93■■□□□ 1.42
TRIM42Q8IWZ5 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
TRIM42Q8IWZ5 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
TRIM42Q8IWZ5 RPS2-210ENST00000530225 765 ntTSL 2 BASIC23.93■■□□□ 1.42
TRIM42Q8IWZ5 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC23.93■■□□□ 1.42
TRIM42Q8IWZ5 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
TRIM42Q8IWZ5 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.93■■□□□ 1.42
TRIM42Q8IWZ5 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TRIM42Q8IWZ5 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TRIM42Q8IWZ5 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.92■■□□□ 1.42
TRIM42Q8IWZ5 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.92■■□□□ 1.42
TRIM42Q8IWZ5 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TRIM42Q8IWZ5 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
TRIM42Q8IWZ5 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TRIM42Q8IWZ5 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TRIM42Q8IWZ5 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
TRIM42Q8IWZ5 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
TRIM42Q8IWZ5 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
TRIM42Q8IWZ5 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TRIM42Q8IWZ5 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
TRIM42Q8IWZ5 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.9■■□□□ 1.42
TRIM42Q8IWZ5 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
TRIM42Q8IWZ5 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.9■■□□□ 1.42
TRIM42Q8IWZ5 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TRIM42Q8IWZ5 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
TRIM42Q8IWZ5 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.89■■□□□ 1.42
TRIM42Q8IWZ5 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.89■■□□□ 1.42
TRIM42Q8IWZ5 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.89■■□□□ 1.42
TRIM42Q8IWZ5 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.89■■□□□ 1.42
TRIM42Q8IWZ5 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
TRIM42Q8IWZ5 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TRIM42Q8IWZ5 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
TRIM42Q8IWZ5 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC23.88■■□□□ 1.41
TRIM42Q8IWZ5 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRIM42Q8IWZ5 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.88■■□□□ 1.41
TRIM42Q8IWZ5 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRIM42Q8IWZ5 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRIM42Q8IWZ5 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
TRIM42Q8IWZ5 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.88■■□□□ 1.41
TRIM42Q8IWZ5 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRIM42Q8IWZ5 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TRIM42Q8IWZ5 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRIM42Q8IWZ5 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.87■■□□□ 1.41
TRIM42Q8IWZ5 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRIM42Q8IWZ5 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRIM42Q8IWZ5 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC23.87■■□□□ 1.41
TRIM42Q8IWZ5 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.87■■□□□ 1.41
TRIM42Q8IWZ5 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TRIM42Q8IWZ5 AC096887.2-201ENST00000623443 1957 ntBASIC23.87■■□□□ 1.41
TRIM42Q8IWZ5 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRIM42Q8IWZ5 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.86■■□□□ 1.41
TRIM42Q8IWZ5 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRIM42Q8IWZ5 MLEC-202ENST00000412616 841 ntTSL 3 BASIC23.86■■□□□ 1.41
TRIM42Q8IWZ5 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.86■■□□□ 1.41
TRIM42Q8IWZ5 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRIM42Q8IWZ5 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.86■■□□□ 1.41
TRIM42Q8IWZ5 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TRIM42Q8IWZ5 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TRIM42Q8IWZ5 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TRIM42Q8IWZ5 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
TRIM42Q8IWZ5 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.85■■□□□ 1.41
TRIM42Q8IWZ5 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TRIM42Q8IWZ5 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRIM42Q8IWZ5 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.84■■□□□ 1.41
TRIM42Q8IWZ5 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.84■■□□□ 1.41
TRIM42Q8IWZ5 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.84■■□□□ 1.41
TRIM42Q8IWZ5 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
TRIM42Q8IWZ5 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TRIM42Q8IWZ5 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.84■■□□□ 1.41
TRIM42Q8IWZ5 ABHD17AP4-201ENST00000411545 909 ntBASIC23.84■■□□□ 1.41
TRIM42Q8IWZ5 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TRIM42Q8IWZ5 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.84■■□□□ 1.41
TRIM42Q8IWZ5 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRIM42Q8IWZ5 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRIM42Q8IWZ5 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TRIM42Q8IWZ5 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
TRIM42Q8IWZ5 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TRIM42Q8IWZ5 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.41
TRIM42Q8IWZ5 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
TRIM42Q8IWZ5 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
TRIM42Q8IWZ5 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
TRIM42Q8IWZ5 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
TRIM42Q8IWZ5 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
TRIM42Q8IWZ5 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
TRIM42Q8IWZ5 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
TRIM42Q8IWZ5 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM42Q8IWZ5 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
TRIM42Q8IWZ5 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM42Q8IWZ5 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM42Q8IWZ5 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM42Q8IWZ5 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM42Q8IWZ5 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM42Q8IWZ5 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC23.81■■□□□ 1.4
TRIM42Q8IWZ5 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC23.81■■□□□ 1.4
TRIM42Q8IWZ5 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC23.81■■□□□ 1.4
TRIM42Q8IWZ5 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC23.81■■□□□ 1.4
TRIM42Q8IWZ5 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM42Q8IWZ5 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM42Q8IWZ5 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms