Protein–RNA interactions for Protein: Q86XP3

DDX42, ATP-dependent RNA helicase DDX42, humanhuman

Known RBP eCLIP

Length 938 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42Q86XP3 BAZ2A-201ENST00000379441 8831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.482e-6■■□□□ 12.3
DDX42Q86XP3 BAZ2A-216ENST00000551996 849 ntTSL 511.62□□□□□ -0.552e-6■■□□□ 12.3
DDX42Q86XP3 BAZ2A-211ENST00000549884 6050 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.662e-6■■□□□ 12.3
DDX42Q86XP3 BAZ2A-214ENST00000551812 8600 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.672e-6■■□□□ 12.3
DDX42Q86XP3 PNCK-205ENST00000411968 557 ntTSL 510.37□□□□□ -0.752e-6■■□□□ 12.3
DDX42Q86XP3 EZH2-205ENST00000476773 2572 ntTSL 2 BASIC10.04□□□□□ -0.82e-6■■□□□ 12.3
DDX42Q86XP3 ANKRD11-215ENST00000568512 294 ntTSL 29.36□□□□□ -0.912e-6■■□□□ 12.3
DDX42Q86XP3 RNF213-205ENST00000558116 3768 ntTSL 29.27□□□□□ -0.932e-6■■□□□ 12.3
DDX42Q86XP3 RNF213-219ENST00000574909 298 ntTSL 38.34□□□□□ -1.072e-6■■□□□ 12.3
DDX42Q86XP3 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.092e-6■■□□□ 12.3
DDX42Q86XP3 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC23.35■■□□□ 1.335e-6■■□□□ 12.2
DDX42Q86XP3 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.92■□□□□ 0.625e-6■■□□□ 12.2
DDX42Q86XP3 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC18■□□□□ 0.475e-6■■□□□ 12.2
DDX42Q86XP3 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18■□□□□ 0.475e-6■■□□□ 12.2
DDX42Q86XP3 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.085e-6■■□□□ 12.2
DDX42Q86XP3 DNM2-210ENST00000587830 868 ntTSL 511.8□□□□□ -0.525e-6■■□□□ 12.2
DDX42Q86XP3 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.86■□□□□ 0.939e-7■■□□□ 12.1
DDX42Q86XP3 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.19■□□□□ 0.829e-7■■□□□ 12.1
DDX42Q86XP3 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.24■□□□□ 0.679e-7■■□□□ 12.1
DDX42Q86XP3 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC14.6□□□□□ -0.079e-7■■□□□ 12.1
DDX42Q86XP3 RTN4-211ENST00000438462 656 ntTSL 511.87□□□□□ -0.519e-7■■□□□ 12.1
DDX42Q86XP3 RTN4-206ENST00000394611 4161 ntTSL 1 (best) BASIC9.78□□□□□ -0.849e-7■■□□□ 12.1
DDX42Q86XP3 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.85□□□□□ -1.799e-7■■□□□ 12.1
DDX42Q86XP3 OGT-204ENST00000455587 632 ntTSL 39.1□□□□□ -0.959e-7■■□□□ 12.1
DDX42Q86XP3 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC7.21□□□□□ -1.269e-7■■□□□ 12.1
DDX42Q86XP3 OGT-210ENST00000488174 7243 ntTSL 56.62□□□□□ -1.359e-7■■□□□ 12.1
DDX42Q86XP3 RAB3GAP2-201ENST00000237724 821 ntTSL 316.41■□□□□ 0.224e-8■■□□□ 12.1
DDX42Q86XP3 RAB3GAP2-202ENST00000358951 7257 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.514e-8■■□□□ 12.1
DDX42Q86XP3 RAB3GAP2-207ENST00000478976 575 ntTSL 410.71□□□□□ -0.694e-8■■□□□ 12.1
DDX42Q86XP3 RAB3GAP2-204ENST00000474178 539 ntTSL 410.57□□□□□ -0.724e-8■■□□□ 12.1
DDX42Q86XP3 RAB3GAP2-208ENST00000484658 515 ntTSL 47.91□□□□□ -1.144e-8■■□□□ 12.1
DDX42Q86XP3 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.38■■□□□ 1.013e-10■■□□□ 12
DDX42Q86XP3 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.74■□□□□ 0.913e-10■■□□□ 12
DDX42Q86XP3 GOLGA4-209ENST00000450863 1617 ntTSL 520.54■□□□□ 0.883e-10■■□□□ 12
DDX42Q86XP3 GOLGA4-203ENST00000419177 760 ntTSL 316.94■□□□□ 0.33e-10■■□□□ 12
DDX42Q86XP3 GOLGA4-204ENST00000429018 2036 ntTSL 1 (best)16.65■□□□□ 0.263e-10■■□□□ 12
DDX42Q86XP3 GOLGA4-205ENST00000431105 568 ntTSL 315.24■□□□□ 0.033e-10■■□□□ 12
DDX42Q86XP3 GOLGA4-202ENST00000361924 7772 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.43e-10■■□□□ 12
DDX42Q86XP3 GOLGA4-201ENST00000356847 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.473e-10■■□□□ 12
DDX42Q86XP3 GOLGA4-206ENST00000435830 4152 ntTSL 1 (best)10.68□□□□□ -0.73e-10■■□□□ 12
DDX42Q86XP3 HBBP1-201ENST00000433329 439 ntBASIC8.24□□□□□ -1.098e-6■■□□□ 11.9
DDX42Q86XP3 HNRNPU-217ENST00000638952 5678 ntTSL 518.33■□□□□ 0.528e-7■■□□□ 11.8
DDX42Q86XP3 HNRNPU-228ENST00000640306 2917 ntTSL 518.18■□□□□ 0.58e-7■■□□□ 11.8
DDX42Q86XP3 HNRNPU-209ENST00000476241 4844 ntTSL 517.12■□□□□ 0.338e-7■■□□□ 11.8
DDX42Q86XP3 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.338e-7■■□□□ 11.8
DDX42Q86XP3 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.298e-7■■□□□ 11.8
DDX42Q86XP3 HNRNPU-214ENST00000638475 2698 ntTSL 515.93■□□□□ 0.148e-7■■□□□ 11.8
DDX42Q86XP3 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.058e-7■■□□□ 11.8
DDX42Q86XP3 HNRNPU-229ENST00000640440 871 ntTSL 315.24■□□□□ 0.038e-7■■□□□ 11.8
DDX42Q86XP3 HNRNPU-224ENST00000640056 2045 ntTSL 510.9□□□□□ -0.668e-7■■□□□ 11.8
DDX42Q86XP3 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.887e-6■■□□□ 11.7
DDX42Q86XP3 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.867e-6■■□□□ 11.7
DDX42Q86XP3 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.17e-6■■□□□ 11.7
DDX42Q86XP3 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.417e-6■■□□□ 11.7
DDX42Q86XP3 INTS11-223ENST00000498173 1589 ntTSL 222.48■■□□□ 1.193e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.123e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.98■■□□□ 1.113e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21■□□□□ 0.953e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-220ENST00000493534 896 ntTSL 320.66■□□□□ 0.93e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.6■□□□□ 0.893e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.33■□□□□ 0.853e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-235ENST00000527719 750 ntTSL 519.97■□□□□ 0.793e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-239ENST00000531019 549 ntTSL 419.86■□□□□ 0.773e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-230ENST00000526332 579 ntTSL 419.86■□□□□ 0.773e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-224ENST00000498476 554 ntTSL 419.86■□□□□ 0.773e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-221ENST00000496353 2428 ntTSL 219.68■□□□□ 0.743e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-215ENST00000470679 584 ntTSL 519.66■□□□□ 0.743e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-219ENST00000490853 704 ntTSL 319.62■□□□□ 0.733e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.25■□□□□ 0.673e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-218ENST00000488042 1134 ntTSL 218.67■□□□□ 0.583e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-237ENST00000530031 800 ntTSL 518.38■□□□□ 0.533e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-207ENST00000434694 1056 ntTSL 518.2■□□□□ 0.53e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.73■□□□□ 0.433e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-243ENST00000532772 1618 ntTSL 517.7■□□□□ 0.423e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-232ENST00000526904 551 ntTSL 417.68■□□□□ 0.423e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-201ENST00000323275 2450 ntTSL 1 (best)17.47■□□□□ 0.393e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.4■□□□□ 0.383e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-210ENST00000458452 2571 ntTSL 217.28■□□□□ 0.363e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-233ENST00000527098 2004 ntTSL 216.85■□□□□ 0.293e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-206ENST00000430786 849 ntTSL 516.21■□□□□ 0.193e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-236ENST00000528879 1524 ntTSL 516.02■□□□□ 0.153e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.89■□□□□ 0.133e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-226ENST00000525285 579 ntTSL 415.61■□□□□ 0.093e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC15.36■□□□□ 0.053e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-227ENST00000525603 738 ntTSL 315.26■□□□□ 0.033e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-229ENST00000526113 591 ntTSL 514.54□□□□□ -0.083e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-244ENST00000532952 773 ntTSL 314.38□□□□□ -0.113e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-231ENST00000526797 659 ntTSL 413.19□□□□□ -0.33e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-246ENST00000534345 485 ntTSL 412.6□□□□□ -0.393e-7■■□□□ 11.7
DDX42Q86XP3 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.18□□□□□ -1.746e-7■■□□□ 11.7
DDX42Q86XP3 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.732e-9■■□□□ 11.5
DDX42Q86XP3 RTN4-214ENST00000486085 955 ntTSL 38.35□□□□□ -1.078e-7■■□□□ 11.5
DDX42Q86XP3 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.258e-7■■□□□ 11.5
DDX42Q86XP3 CPZ-205ENST00000506287 906 ntTSL 322.8■■□□□ 1.245e-6■■□□□ 11.5
DDX42Q86XP3 CPZ-207ENST00000514602 692 ntTSL 222.41■■□□□ 1.185e-6■■□□□ 11.5
DDX42Q86XP3 ZSWIM8-219ENST00000604165 582 ntTSL 522.09■■□□□ 1.135e-6■■□□□ 11.5
DDX42Q86XP3 AKAP8-203ENST00000595416 557 ntTSL 321.92■■□□□ 1.15e-6■■□□□ 11.5
DDX42Q86XP3 CPZ-204ENST00000504070 583 ntTSL 420.38■□□□□ 0.855e-6■■□□□ 11.5
DDX42Q86XP3 AKAP8-205ENST00000599883 860 ntTSL 520.36■□□□□ 0.855e-6■■□□□ 11.5
DDX42Q86XP3 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.845e-6■■□□□ 11.5
Retrieved 100 of 2,477 protein–RNA pairs in 46.9 ms