RNA–Protein interactions for RNA: ENST00000484658.1

RAB3GAP2-208, Transcript of RAB3 GTPase activating non-catalytic protein subunit 2, humanhuman

TSL 4

Gene RAB3GAP2, Length 515 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP2-208ENST00000484658 AEBP2Q6ZN18 517 aaPredicted RBP19.67■□□□□ 0.74
RAB3GAP2-208ENST00000484658 CHIC1Q5VXU3 224 aa19.6■□□□□ 0.73
RAB3GAP2-208ENST00000484658 NISCHQ9Y2I1 1504 aa19.53■□□□□ 0.72
RAB3GAP2-208ENST00000484658 ABCC9O60706 1549 aa18.33■□□□□ 0.53
RAB3GAP2-208ENST00000484658 CCDC180Q9P1Z9 1646 aa17.87■□□□□ 0.45
RAB3GAP2-208ENST00000484658 DNAJC5BQ9UF47 199 aa17.77■□□□□ 0.44
RAB3GAP2-208ENST00000484658 PHF23Q9BUL5 403 aaPredicted RBP17.35■□□□□ 0.37
RAB3GAP2-208ENST00000484658 RB1CC1Q8TDY2 1594 aa17.25■□□□□ 0.35
RAB3GAP2-208ENST00000484658 NACADO15069 1562 aa17.01■□□□□ 0.31
RAB3GAP2-208ENST00000484658 UNC13AQ9UPW8 1703 aa16.93■□□□□ 0.3
RAB3GAP2-208ENST00000484658 PABPN1Q86U42 306 aaKnown RBP eCLIP16.92■□□□□ 0.3
RAB3GAP2-208ENST00000484658 DNAJC5Q9H3Z4 198 aa16.81■□□□□ 0.28
RAB3GAP2-208ENST00000484658 BICRAQ9NZM4 1560 aa16.8■□□□□ 0.28
RAB3GAP2-208ENST00000484658 MYO15BQ96JP2 1530 aa16.61■□□□□ 0.25
RAB3GAP2-208ENST00000484658 CECR2Q9BXF3 1484 aa16.61■□□□□ 0.25
RAB3GAP2-208ENST00000484658 CC2D2AQ9P2K1 1620 aa16.6■□□□□ 0.25
RAB3GAP2-208ENST00000484658 DCAF8L2P0C7V8 631 aa16.59■□□□□ 0.25
RAB3GAP2-208ENST00000484658 SENP3Q9H4L4 574 aaPredicted RBP16.59■□□□□ 0.25
RAB3GAP2-208ENST00000484658 SHROOM4Q9ULL8 1493 aa16.54■□□□□ 0.24
RAB3GAP2-208ENST00000484658 EIF4G1Q04637 1599 aaKnown RBP16.41■□□□□ 0.22
RAB3GAP2-208ENST00000484658 DCAF1Q9Y4B6 1507 aa16.15■□□□□ 0.18
RAB3GAP2-208ENST00000484658 CUX2O14529 1486 aa16.13■□□□□ 0.17
RAB3GAP2-208ENST00000484658 SCRIBQ14160 1630 aa16.12■□□□□ 0.17
RAB3GAP2-208ENST00000484658 PLPPR3Q6T4P5 718 aa16.1■□□□□ 0.17
RAB3GAP2-208ENST00000484658 ZCCHC6Q5VYS8 1495 aaKnown RBP16.05■□□□□ 0.16
RAB3GAP2-208ENST00000484658 ERCC6Q03468 1493 aa15.85■□□□□ 0.13
RAB3GAP2-208ENST00000484658 TRIM41Q8WV44 630 aa15.7■□□□□ 0.1
RAB3GAP2-208ENST00000484658 NCAPD3P42695 1498 aa15.7■□□□□ 0.1
RAB3GAP2-208ENST00000484658 THOC2Q8NI27 1593 aaKnown RBP15.62■□□□□ 0.09
RAB3GAP2-208ENST00000484658 NESP48681 1621 aa15.58■□□□□ 0.09
RAB3GAP2-208ENST00000484658 HMGXB3Q12766 1538 aa15.53■□□□□ 0.08
RAB3GAP2-208ENST00000484658 ATAD2BQ9ULI0 1458 aa15.53■□□□□ 0.08
RAB3GAP2-208ENST00000484658 FOXD1Q16676 465 aa15.52■□□□□ 0.08
RAB3GAP2-208ENST00000484658 SMARCA2P51531 1590 aa15.46■□□□□ 0.07
RAB3GAP2-208ENST00000484658 LAMC3Q9Y6N6 1575 aa15.45■□□□□ 0.06
RAB3GAP2-208ENST00000484658 KIF21AQ7Z4S6 1674 aa15.43■□□□□ 0.06
RAB3GAP2-208ENST00000484658 SMARCA4P51532 1647 aa15.38■□□□□ 0.05
RAB3GAP2-208ENST00000484658 PDS5BQ9NTI5 1447 aa15.34■□□□□ 0.05
RAB3GAP2-208ENST00000484658 BAZ1BQ9UIG0 1483 aaKnown RBP15.32■□□□□ 0.04
RAB3GAP2-208ENST00000484658 BAZ1AQ9NRL2 1556 aaPredicted RBP15.32■□□□□ 0.04
RAB3GAP2-208ENST00000484658 PEG3Q9GZU2 1588 aa15.28■□□□□ 0.04
RAB3GAP2-208ENST00000484658 WDR62O43379 1518 aa15.26■□□□□ 0.03
RAB3GAP2-208ENST00000484658 OSCARQ8IYS5 282 aa15.24■□□□□ 0.03
RAB3GAP2-208ENST00000484658 MRC2Q9UBG0 1479 aa15.24■□□□□ 0.03
RAB3GAP2-208ENST00000484658 ADRA2BP18089 450 aa15.18■□□□□ 0.02
RAB3GAP2-208ENST00000484658 PPP6R1Q9UPN7 881 aa15.18■□□□□ 0.02
RAB3GAP2-208ENST00000484658 CADPSQ9ULU8 1353 aa15.15■□□□□ 0.02
RAB3GAP2-208ENST00000484658 RIMBP3CA6NJZ7 1639 aa15.15■□□□□ 0.02
RAB3GAP2-208ENST00000484658 RIMBP3BA6NNM3 1639 aa15.15■□□□□ 0.02
RAB3GAP2-208ENST00000484658 RIMBP3Q9UFD9 1639 aa15.15■□□□□ 0.02
RAB3GAP2-208ENST00000484658 CEP164Q9UPV0 1460 aa15.04■□□□□ -0
RAB3GAP2-208ENST00000484658 MROH2BQ7Z745 1585 aa15.02□□□□□ -0.01
RAB3GAP2-208ENST00000484658 ARHGEF11O15085 1522 aa15.02□□□□□ -0.01
RAB3GAP2-208ENST00000484658 FANCD2Q9BXW9 1451 aa14.96□□□□□ -0.01
RAB3GAP2-208ENST00000484658 URB2Q14146 1524 aaKnown RBP14.9□□□□□ -0.02
RAB3GAP2-208ENST00000484658 TRHP20396 242 aaPredicted RBP14.88□□□□□ -0.03
RAB3GAP2-208ENST00000484658 CYB5RLQ6IPT4 315 aa14.88□□□□□ -0.03
RAB3GAP2-208ENST00000484658 CFTRP13569 1480 aa14.87□□□□□ -0.03
RAB3GAP2-208ENST00000484658 ARAP1Q96P48 1450 aa14.82□□□□□ -0.04
RAB3GAP2-208ENST00000484658 WIZO95785 1651 aa14.82□□□□□ -0.04
RAB3GAP2-208ENST00000484658 ZNF608Q9ULD9 1512 aaPredicted RBP14.8□□□□□ -0.04
RAB3GAP2-208ENST00000484658 IFT140Q96RY7 1462 aa14.78□□□□□ -0.04
RAB3GAP2-208ENST00000484658 CHD1O14646 1710 aa14.75□□□□□ -0.05
RAB3GAP2-208ENST00000484658 PRDM2Q13029 1718 aa14.75□□□□□ -0.05
RAB3GAP2-208ENST00000484658 RSF1Q96T23 1441 aaPredicted RBP14.75□□□□□ -0.05
RAB3GAP2-208ENST00000484658 EIF4G3O43432 1585 aaKnown RBP14.71□□□□□ -0.05
RAB3GAP2-208ENST00000484658 TOPBP1Q92547 1522 aa14.63□□□□□ -0.07
RAB3GAP2-208ENST00000484658 ABCC8Q09428 1581 aa14.6□□□□□ -0.07
RAB3GAP2-208ENST00000484658 TOP2AP11388 1531 aaKnown RBP14.59□□□□□ -0.07
RAB3GAP2-208ENST00000484658 TARBP1Q13395 1621 aaKnown RBP14.59□□□□□ -0.07
RAB3GAP2-208ENST00000484658 AQRO60306 1485 aaKnown RBP eCLIP14.57□□□□□ -0.08
RAB3GAP2-208ENST00000484658 CLASP1Q7Z460 1538 aa14.56□□□□□ -0.08
RAB3GAP2-208ENST00000484658 PIAS4Q8N2W9 510 aaPredicted RBP14.56□□□□□ -0.08
RAB3GAP2-208ENST00000484658 DNMBPQ6XZF7 1577 aa14.54□□□□□ -0.08
RAB3GAP2-208ENST00000484658 FBLN2P98095 1184 aa14.52□□□□□ -0.09
RAB3GAP2-208ENST00000484658 KCNA4P22459 653 aa14.49□□□□□ -0.09
RAB3GAP2-208ENST00000484658 SYNJ1O43426 1573 aa14.47□□□□□ -0.09
RAB3GAP2-208ENST00000484658 MSH5O43196 834 aa14.44□□□□□ -0.1
RAB3GAP2-208ENST00000484658 WDR97A6NE52 1622 aa14.44□□□□□ -0.1
RAB3GAP2-208ENST00000484658 POLA1P09884 1462 aaPredicted RBP14.44□□□□□ -0.1
RAB3GAP2-208ENST00000484658 ILDR1Q86SU0 546 aaPredicted RBP14.41□□□□□ -0.1
RAB3GAP2-208ENST00000484658 CCDC88BA6NC98 1476 aa14.41□□□□□ -0.1
RAB3GAP2-208ENST00000484658 GAPVD1Q14C86 1478 aa14.41□□□□□ -0.1
RAB3GAP2-208ENST00000484658 SNAPC4Q5SXM2 1469 aa14.41□□□□□ -0.1
RAB3GAP2-208ENST00000484658 MAGI1Q96QZ7 1491 aaPredicted RBP14.38□□□□□ -0.11
RAB3GAP2-208ENST00000484658 RAD54L2Q9Y4B4 1467 aa14.37□□□□□ -0.11
RAB3GAP2-208ENST00000484658 TDRD9Q8NDG6 1382 aaKnown RBP14.36□□□□□ -0.11
RAB3GAP2-208ENST00000484658 CHMP7Q8WUX9 453 aaPredicted RBP14.36□□□□□ -0.11
RAB3GAP2-208ENST00000484658 KIF13AQ9H1H9 1805 aa14.36□□□□□ -0.11
RAB3GAP2-208ENST00000484658 SOGA1O94964 1423 aa14.33□□□□□ -0.11
RAB3GAP2-208ENST00000484658 SYNJ2O15056 1496 aa14.33□□□□□ -0.12
RAB3GAP2-208ENST00000484658 GRIN2BQ13224 1484 aa14.3□□□□□ -0.12
RAB3GAP2-208ENST00000484658 PPP4R3CPQ6ZMV5 832 aa14.29□□□□□ -0.12
RAB3GAP2-208ENST00000484658 PBRM1Q86U86 1689 aa14.25□□□□□ -0.13
RAB3GAP2-208ENST00000484658 ERCC6L2Q5T890 1561 aa14.25□□□□□ -0.13
RAB3GAP2-208ENST00000484658 FGD5Q6ZNL6 1462 aa14.25□□□□□ -0.13
RAB3GAP2-208ENST00000484658 KDM4FA0A1W2PPD8 638 aa14.23□□□□□ -0.13
RAB3GAP2-208ENST00000484658 CEP170Q5SW79 1584 aa14.18□□□□□ -0.14
RAB3GAP2-208ENST00000484658 SHROOM2Q13796 1616 aa14.17□□□□□ -0.14
RAB3GAP2-208ENST00000484658 CUX1P39880 1505 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms