RNA–Protein interactions for RNA: ENST00000558116.5

RNF213-205, Transcript of ring finger protein 213, humanhuman

TSL 2

Gene RNF213, Length 3,768 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213-205ENST00000558116 NISCHQ9Y2I1 1504 aa15.63■□□□□ 0.09
RNF213-205ENST00000558116 SHROOM4Q9ULL8 1493 aa14.73□□□□□ -0.05
RNF213-205ENST00000558116 DCAF8L2P0C7V8 631 aa14.73□□□□□ -0.05
RNF213-205ENST00000558116 SUPT5HO00267 1087 aaKnown RBP14.67□□□□□ -0.06
RNF213-205ENST00000558116 EHMT2Q96KQ7 1210 aa14.11□□□□□ -0.15
RNF213-205ENST00000558116 PCGF6Q9BYE7 350 aa13.96□□□□□ -0.17
RNF213-205ENST00000558116 FAM9AQ8IZU1 332 aaPredicted RBP13.77□□□□□ -0.2
RNF213-205ENST00000558116 PELP1Q8IZL8 1130 aaKnown RBP13.76□□□□□ -0.21
RNF213-205ENST00000558116 PPARGC1BQ86YN6 1023 aaKnown RBP13.7□□□□□ -0.22
RNF213-205ENST00000558116 LOC105371045A0A1W2PR82 267 aa13.65□□□□□ -0.22
RNF213-205ENST00000558116 TTBK1Q5TCY1 1321 aaPredicted RBP13.61□□□□□ -0.23
RNF213-205ENST00000558116 CHIC1Q5VXU3 224 aa13.6□□□□□ -0.23
RNF213-205ENST00000558116 HRCP23327 699 aa13.52□□□□□ -0.25
RNF213-205ENST00000558116 MYT1Q01538 1121 aa13.4□□□□□ -0.26
RNF213-205ENST00000558116 TRIM41Q8WV44 630 aa13.35□□□□□ -0.27
RNF213-205ENST00000558116 MYO15BQ96JP2 1530 aa13.3□□□□□ -0.28
RNF213-205ENST00000558116 RANGAP1P46060 587 aaPredicted RBP13.21□□□□□ -0.29
RNF213-205ENST00000558116 TRIM26Q12899 539 aaPredicted RBP13.17□□□□□ -0.3
RNF213-205ENST00000558116 ZCCHC6Q5VYS8 1495 aaKnown RBP13.16□□□□□ -0.3
RNF213-205ENST00000558116 CCER1Q8TC90 406 aaPredicted RBP13.12□□□□□ -0.31
RNF213-205ENST00000558116 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.06□□□□□ -0.32
RNF213-205ENST00000558116 ABCC9O60706 1549 aa13.03□□□□□ -0.32
RNF213-205ENST00000558116 YTHDC1Q96MU7 727 aaKnown RBP13.03□□□□□ -0.32
RNF213-205ENST00000558116 CCDC180Q9P1Z9 1646 aa13.01□□□□□ -0.33
RNF213-205ENST00000558116 UBTFP17480 764 aaKnown RBP12.95□□□□□ -0.34
RNF213-205ENST00000558116 SCAF1Q9H7N4 1312 aaKnown RBP12.95□□□□□ -0.34
RNF213-205ENST00000558116 ZEB1P37275 1124 aaPredicted RBP12.92□□□□□ -0.34
RNF213-205ENST00000558116 HNRNPUL2Q1KMD3 747 aaKnown RBP12.82□□□□□ -0.36
RNF213-205ENST00000558116 APLP2Q06481 763 aa12.79□□□□□ -0.36
RNF213-205ENST00000558116 SCRIBQ14160 1630 aa12.74□□□□□ -0.37
RNF213-205ENST00000558116 CENPBP07199 599 aaPredicted RBP12.73□□□□□ -0.37
RNF213-205ENST00000558116 DCAF1Q9Y4B6 1507 aa12.71□□□□□ -0.37
RNF213-205ENST00000558116 DIEXFQ68CQ4 756 aaKnown RBP12.71□□□□□ -0.38
RNF213-205ENST00000558116 PABPN1Q86U42 306 aaKnown RBP eCLIP12.69□□□□□ -0.38
RNF213-205ENST00000558116 PRKCSHP14314 528 aaPredicted RBP12.69□□□□□ -0.38
RNF213-205ENST00000558116 BCL11AQ9H165 835 aa12.69□□□□□ -0.38
RNF213-205ENST00000558116 ITGAEP38570 1179 aa12.69□□□□□ -0.38
RNF213-205ENST00000558116 GTF3C3Q9Y5Q9 886 aa12.66□□□□□ -0.38
RNF213-205ENST00000558116 ATP1B4Q9UN42 357 aaPredicted RBP12.64□□□□□ -0.39
RNF213-205ENST00000558116 NEUROD1Q13562 356 aa12.59□□□□□ -0.39
RNF213-205ENST00000558116 RSF1Q96T23 1441 aaPredicted RBP12.57□□□□□ -0.4
RNF213-205ENST00000558116 ACIN1Q9UKV3 1341 aaKnown RBP12.51□□□□□ -0.41
RNF213-205ENST00000558116 CECR2Q9BXF3 1484 aa12.46□□□□□ -0.41
RNF213-205ENST00000558116 RB1CC1Q8TDY2 1594 aa12.46□□□□□ -0.42
RNF213-205ENST00000558116 CSRNP3Q8WYN3 585 aa12.41□□□□□ -0.42
RNF213-205ENST00000558116 ZNF316A6NFI3 1004 aaPredicted RBP12.39□□□□□ -0.43
RNF213-205ENST00000558116 BCANQ96GW7 911 aa12.38□□□□□ -0.43
RNF213-205ENST00000558116 ERICH6Q7L0X2 663 aa12.37□□□□□ -0.43
RNF213-205ENST00000558116 CNGB1Q14028 1251 aaPredicted RBP12.37□□□□□ -0.43
RNF213-205ENST00000558116 NACADO15069 1562 aa12.36□□□□□ -0.43
RNF213-205ENST00000558116 MIER1Q8N108 512 aa12.34□□□□□ -0.43
RNF213-205ENST00000558116 P3H3Q8IVL6 736 aa12.27□□□□□ -0.45
RNF213-205ENST00000558116 MROH2BQ7Z745 1585 aa12.27□□□□□ -0.45
RNF213-205ENST00000558116 CEP162Q5TB80 1403 aa12.26□□□□□ -0.45
RNF213-205ENST00000558116 SOGA1O94964 1423 aa12.25□□□□□ -0.45
RNF213-205ENST00000558116 ABCC8Q09428 1581 aa12.25□□□□□ -0.45
RNF213-205ENST00000558116 FAM50AQ14320 339 aaKnown RBP12.25□□□□□ -0.45
RNF213-205ENST00000558116 DNAJC5BQ9UF47 199 aa12.23□□□□□ -0.45
RNF213-205ENST00000558116 HIRIP3Q9BW71 556 aaPredicted RBP12.22□□□□□ -0.45
RNF213-205ENST00000558116 CCDC88BA6NC98 1476 aa12.19□□□□□ -0.46
RNF213-205ENST00000558116 WIZO95785 1651 aa12.17□□□□□ -0.46
RNF213-205ENST00000558116 POLR3GLQ9BT43 218 aa12.15□□□□□ -0.46
RNF213-205ENST00000558116 ARID3CA6NKF2 412 aa12.15□□□□□ -0.47
RNF213-205ENST00000558116 NEFLP07196 543 aa12.14□□□□□ -0.47
RNF213-205ENST00000558116 RUSC2Q8N2Y8 1516 aa12.13□□□□□ -0.47
RNF213-205ENST00000558116 ANP32EQ9BTT0 268 aa12.11□□□□□ -0.47
RNF213-205ENST00000558116 CLIP1P30622 1438 aa12.1□□□□□ -0.47
RNF213-205ENST00000558116 DDX10Q13206 875 aaKnown RBP12.09□□□□□ -0.47
RNF213-205ENST00000558116 TRIM52Q96A61 297 aa12.06□□□□□ -0.48
RNF213-205ENST00000558116 SENP3-EIF4A1A0A087X0R7 540 aa12.02□□□□□ -0.48
RNF213-205ENST00000558116 TNIKQ9UKE5 1360 aa12.02□□□□□ -0.48
RNF213-205ENST00000558116 WRNQ14191 1432 aaPredicted RBP eCLIP12.02□□□□□ -0.49
RNF213-205ENST00000558116 FKBP8Q14318 412 aa12.01□□□□□ -0.49
RNF213-205ENST00000558116 BAZ1AQ9NRL2 1556 aaPredicted RBP12□□□□□ -0.49
RNF213-205ENST00000558116 KANK4Q5T7N3 995 aaPredicted RBP12□□□□□ -0.49
RNF213-205ENST00000558116 IRX6P78412 446 aaPredicted RBP11.99□□□□□ -0.49
RNF213-205ENST00000558116 GOLGA3Q08378 1498 aa11.99□□□□□ -0.49
RNF213-205ENST00000558116 KCNH8Q96L42 1107 aa11.97□□□□□ -0.49
RNF213-205ENST00000558116 SIN3AQ96ST3 1273 aa11.97□□□□□ -0.49
RNF213-205ENST00000558116 BICRAQ9NZM4 1560 aa11.96□□□□□ -0.5
RNF213-205ENST00000558116 UNC13AQ9UPW8 1703 aa11.94□□□□□ -0.5
RNF213-205ENST00000558116 ZNF326Q5BKZ1 582 aaKnown RBP11.94□□□□□ -0.5
RNF213-205ENST00000558116 ANO8Q9HCE9 1232 aaPredicted RBP11.93□□□□□ -0.5
RNF213-205ENST00000558116 CHIC2Q9UKJ5 165 aa11.91□□□□□ -0.5
RNF213-205ENST00000558116 ANP32CO43423 234 aa11.9□□□□□ -0.5
RNF213-205ENST00000558116 CCDC136Q96JN2 1154 aa11.89□□□□□ -0.51
RNF213-205ENST00000558116 SUPT16HQ9Y5B9 1047 aaKnown RBP11.89□□□□□ -0.51
RNF213-205ENST00000558116 TOP2AP11388 1531 aaKnown RBP11.87□□□□□ -0.51
RNF213-205ENST00000558116 CEP164Q9UPV0 1460 aa11.86□□□□□ -0.51
RNF213-205ENST00000558116 RAPGEF2Q9Y4G8 1499 aa11.85□□□□□ -0.51
RNF213-205ENST00000558116 SMARCA4P51532 1647 aa11.85□□□□□ -0.51
RNF213-205ENST00000558116 HNRNPUQ00839 825 aaKnown RBP eCLIP11.84□□□□□ -0.51
RNF213-205ENST00000558116 EEA1Q15075 1411 aa11.82□□□□□ -0.52
RNF213-205ENST00000558116 VPS8Q8N3P4 1428 aa11.81□□□□□ -0.52
RNF213-205ENST00000558116 BAZ1BQ9UIG0 1483 aaKnown RBP11.81□□□□□ -0.52
RNF213-205ENST00000558116 SMARCA2P51531 1590 aa11.81□□□□□ -0.52
RNF213-205ENST00000558116 FAM9BQ8IZU0 186 aa11.81□□□□□ -0.52
RNF213-205ENST00000558116 RRP7BPQ9NSQ0 103 aa11.79□□□□□ -0.52
RNF213-205ENST00000558116 TONSLQ96HA7 1378 aa11.77□□□□□ -0.52
RNF213-205ENST00000558116 SALL2Q9Y467 1007 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 138.8 ms