RNA–Protein interactions for RNA: ENST00000380636.1

TMSB4X-203, Transcript of thymosin beta 4 X-linked, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMSB4X, Length 1,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMSB4X-203ENST00000380636 NISCHQ9Y2I1 1504 aa44.17■■■■■ 4.66
TMSB4X-203ENST00000380636 CCDC180Q9P1Z9 1646 aa38.61■■■■□ 3.77
TMSB4X-203ENST00000380636 ZCCHC6Q5VYS8 1495 aaKnown RBP37.05■■■■□ 3.52
TMSB4X-203ENST00000380636 ABCC9O60706 1549 aa36.69■■■■□ 3.46
TMSB4X-203ENST00000380636 DCAF1Q9Y4B6 1507 aa36.56■■■■□ 3.44
TMSB4X-203ENST00000380636 DCAF8L2P0C7V8 631 aa36.48■■■■□ 3.43
TMSB4X-203ENST00000380636 MYO15BQ96JP2 1530 aa36.24■■■■□ 3.39
TMSB4X-203ENST00000380636 NACADO15069 1562 aa36.04■■■■□ 3.36
TMSB4X-203ENST00000380636 RB1CC1Q8TDY2 1594 aa35.76■■■■□ 3.32
TMSB4X-203ENST00000380636 SHROOM4Q9ULL8 1493 aa35.75■■■■□ 3.31
TMSB4X-203ENST00000380636 SCRIBQ14160 1630 aa35.41■■■■□ 3.26
TMSB4X-203ENST00000380636 UNC13AQ9UPW8 1703 aa35■■■■□ 3.19
TMSB4X-203ENST00000380636 BICRAQ9NZM4 1560 aa34.72■■■■□ 3.15
TMSB4X-203ENST00000380636 PABPN1Q86U42 306 aaKnown RBP eCLIP34.57■■■■□ 3.12
TMSB4X-203ENST00000380636 SUPT5HO00267 1087 aaKnown RBP34.42■■■■□ 3.1
TMSB4X-203ENST00000380636 CECR2Q9BXF3 1484 aa34.33■■■■□ 3.09
TMSB4X-203ENST00000380636 RSF1Q96T23 1441 aaPredicted RBP34.18■■■■□ 3.06
TMSB4X-203ENST00000380636 BAZ1AQ9NRL2 1556 aaPredicted RBP34.11■■■■□ 3.05
TMSB4X-203ENST00000380636 MROH2BQ7Z745 1585 aa34.1■■■■□ 3.05
TMSB4X-203ENST00000380636 SMARCA4P51532 1647 aa33.98■■■■□ 3.03
TMSB4X-203ENST00000380636 WIZO95785 1651 aa33.77■■■■□ 3
TMSB4X-203ENST00000380636 EIF4G1Q04637 1599 aaKnown RBP33.67■■■□□ 2.98
TMSB4X-203ENST00000380636 PEG3Q9GZU2 1588 aa33.63■■■□□ 2.97
TMSB4X-203ENST00000380636 ATAD2BQ9ULI0 1458 aa33.52■■■□□ 2.96
TMSB4X-203ENST00000380636 SMARCA2P51531 1590 aa33.47■■■□□ 2.95
TMSB4X-203ENST00000380636 TOP2AP11388 1531 aaKnown RBP33.44■■■□□ 2.94
TMSB4X-203ENST00000380636 NCAPD3P42695 1498 aa33.3■■■□□ 2.92
TMSB4X-203ENST00000380636 BAZ1BQ9UIG0 1483 aaKnown RBP33.27■■■□□ 2.92
TMSB4X-203ENST00000380636 CC2D2AQ9P2K1 1620 aa33.22■■■□□ 2.91
TMSB4X-203ENST00000380636 HMGXB3Q12766 1538 aa33.2■■■□□ 2.9
TMSB4X-203ENST00000380636 CHIC1Q5VXU3 224 aa33.16■■■□□ 2.9
TMSB4X-203ENST00000380636 CCDC88BA6NC98 1476 aa33.11■■■□□ 2.89
TMSB4X-203ENST00000380636 DNAJC5BQ9UF47 199 aa32.65■■■□□ 2.82
TMSB4X-203ENST00000380636 CFTRP13569 1480 aa32.48■■■□□ 2.79
TMSB4X-203ENST00000380636 TRIM41Q8WV44 630 aa32.43■■■□□ 2.78
TMSB4X-203ENST00000380636 CADPSQ9ULU8 1353 aa32.41■■■□□ 2.78
TMSB4X-203ENST00000380636 ABCC8Q09428 1581 aa32.28■■■□□ 2.76
TMSB4X-203ENST00000380636 PRDM2Q13029 1718 aa32.22■■■□□ 2.75
TMSB4X-203ENST00000380636 LAMC3Q9Y6N6 1575 aa32.16■■■□□ 2.74
TMSB4X-203ENST00000380636 WRNQ14191 1432 aaPredicted RBP eCLIP32.15■■■□□ 2.74
TMSB4X-203ENST00000380636 NESP48681 1621 aa32.15■■■□□ 2.74
TMSB4X-203ENST00000380636 FANCD2Q9BXW9 1451 aa32.02■■■□□ 2.72
TMSB4X-203ENST00000380636 SYNJ1O43426 1573 aa32.01■■■□□ 2.71
TMSB4X-203ENST00000380636 PDS5BQ9NTI5 1447 aa31.93■■■□□ 2.7
TMSB4X-203ENST00000380636 TOP2BQ02880 1626 aa31.92■■■□□ 2.7
TMSB4X-203ENST00000380636 CUX1P39880 1505 aa31.89■■■□□ 2.7
TMSB4X-203ENST00000380636 BIVM-ERCC5R4GMW8 1640 aa31.88■■■□□ 2.69
TMSB4X-203ENST00000380636 CEP164Q9UPV0 1460 aa31.82■■■□□ 2.69
TMSB4X-203ENST00000380636 LOC105371045A0A1W2PR82 267 aa31.8■■■□□ 2.68
TMSB4X-203ENST00000380636 EEA1Q15075 1411 aa31.76■■■□□ 2.68
TMSB4X-203ENST00000380636 KIF21AQ7Z4S6 1674 aa31.74■■■□□ 2.67
TMSB4X-203ENST00000380636 FAM9AQ8IZU1 332 aaPredicted RBP31.72■■■□□ 2.67
TMSB4X-203ENST00000380636 DNMBPQ6XZF7 1577 aa31.68■■■□□ 2.66
TMSB4X-203ENST00000380636 SOGA1O94964 1423 aa31.66■■■□□ 2.66
TMSB4X-203ENST00000380636 TOPBP1Q92547 1522 aa31.65■■■□□ 2.66
TMSB4X-203ENST00000380636 URB2Q14146 1524 aaKnown RBP31.63■■■□□ 2.65
TMSB4X-203ENST00000380636 FGD5Q6ZNL6 1462 aa31.57■■■□□ 2.65
TMSB4X-203ENST00000380636 RUSC2Q8N2Y8 1516 aa31.56■■■□□ 2.64
TMSB4X-203ENST00000380636 MRC2Q9UBG0 1479 aa31.52■■■□□ 2.64
TMSB4X-203ENST00000380636 POLA1P09884 1462 aaPredicted RBP31.48■■■□□ 2.63
TMSB4X-203ENST00000380636 ERCC6Q03468 1493 aa31.47■■■□□ 2.63
TMSB4X-203ENST00000380636 CSRNP3Q8WYN3 585 aa31.44■■■□□ 2.62
TMSB4X-203ENST00000380636 KIF21BO75037 1637 aa31.37■■■□□ 2.61
TMSB4X-203ENST00000380636 WDR62O43379 1518 aa31.37■■■□□ 2.61
TMSB4X-203ENST00000380636 KIF27Q86VH2 1401 aa31.36■■■□□ 2.61
TMSB4X-203ENST00000380636 RAD54L2Q9Y4B4 1467 aa31.36■■■□□ 2.61
TMSB4X-203ENST00000380636 CUX2O14529 1486 aa31.32■■■□□ 2.6
TMSB4X-203ENST00000380636 ABCA10Q8WWZ4 1543 aa31.32■■■□□ 2.6
TMSB4X-203ENST00000380636 THOC2Q8NI27 1593 aaKnown RBP31.31■■■□□ 2.6
TMSB4X-203ENST00000380636 GOLGA3Q08378 1498 aa31.28■■■□□ 2.6
TMSB4X-203ENST00000380636 TNIKQ9UKE5 1360 aa31.21■■■□□ 2.59
TMSB4X-203ENST00000380636 WDR97A6NE52 1622 aa31.21■■■□□ 2.59
TMSB4X-203ENST00000380636 TARBP1Q13395 1621 aaKnown RBP31.19■■■□□ 2.58
TMSB4X-203ENST00000380636 EHMT2Q96KQ7 1210 aa31.18■■■□□ 2.58
TMSB4X-203ENST00000380636 IGF1RP08069 1367 aa31.15■■■□□ 2.58
TMSB4X-203ENST00000380636 PRXQ9BXM0 1461 aa31.12■■■□□ 2.57
TMSB4X-203ENST00000380636 ERICH3Q5RHP9 1530 aa31.12■■■□□ 2.57
TMSB4X-203ENST00000380636 IFT140Q96RY7 1462 aa31.1■■■□□ 2.57
TMSB4X-203ENST00000380636 TDRD9Q8NDG6 1382 aaKnown RBP31.08■■■□□ 2.57
TMSB4X-203ENST00000380636 ABCA5Q8WWZ7 1642 aa31.06■■■□□ 2.56
TMSB4X-203ENST00000380636 CEP162Q5TB80 1403 aa31.04■■■□□ 2.56
TMSB4X-203ENST00000380636 RAPGEF2Q9Y4G8 1499 aa31.03■■■□□ 2.56
TMSB4X-203ENST00000380636 GAPVD1Q14C86 1478 aa31.02■■■□□ 2.56
TMSB4X-203ENST00000380636 UBTFP17480 764 aaKnown RBP30.98■■■□□ 2.55
TMSB4X-203ENST00000380636 CARMIL1Q5VZK9 1371 aa30.97■■■□□ 2.55
TMSB4X-203ENST00000380636 ZNF608Q9ULD9 1512 aaPredicted RBP30.93■■■□□ 2.54
TMSB4X-203ENST00000380636 AQRO60306 1485 aaKnown RBP eCLIP30.92■■■□□ 2.541e-11■■■■□ 25.5
TMSB4X-203ENST00000380636 CUL7Q14999 1698 aa30.87■■■□□ 2.53
TMSB4X-203ENST00000380636 GRIN2BQ13224 1484 aa30.82■■■□□ 2.52
TMSB4X-203ENST00000380636 PBRM1Q86U86 1689 aa30.81■■■□□ 2.52
TMSB4X-203ENST00000380636 EIF4G3O43432 1585 aaKnown RBP30.79■■■□□ 2.52
TMSB4X-203ENST00000380636 CLIP1P30622 1438 aa30.74■■■□□ 2.51
TMSB4X-203ENST00000380636 HRCP23327 699 aa30.72■■■□□ 2.51
TMSB4X-203ENST00000380636 FHAD1B1AJZ9 1412 aa30.69■■■□□ 2.5
TMSB4X-203ENST00000380636 ADAMTS12P58397 1594 aa30.66■■■□□ 2.5
TMSB4X-203ENST00000380636 TRIM26Q12899 539 aaPredicted RBP30.64■■■□□ 2.5
TMSB4X-203ENST00000380636 SNAPC4Q5SXM2 1469 aa30.62■■■□□ 2.49
TMSB4X-203ENST00000380636 MAGI1Q96QZ7 1491 aaPredicted RBP30.59■■■□□ 2.49
TMSB4X-203ENST00000380636 PCGF6Q9BYE7 350 aa30.59■■■□□ 2.49
TMSB4X-203ENST00000380636 VPS8Q8N3P4 1428 aa30.54■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms