RNA–Protein interactions for RNA: ENST00000356847.8

GOLGA4-201, Transcript of golgin A4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GOLGA4, Length 7,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GOLGA4-201ENST00000356847 DCAF8L2P0C7V8 631 aa19.75■□□□□ 0.75
GOLGA4-201ENST00000356847 SUPT5HO00267 1087 aaKnown RBP18.97■□□□□ 0.63
GOLGA4-201ENST00000356847 NISCHQ9Y2I1 1504 aa18.73■□□□□ 0.59
GOLGA4-201ENST00000356847 SHROOM4Q9ULL8 1493 aa18.65■□□□□ 0.58
GOLGA4-201ENST00000356847 EHMT2Q96KQ7 1210 aa18.52■□□□□ 0.56
GOLGA4-201ENST00000356847 PELP1Q8IZL8 1130 aaKnown RBP18.24■□□□□ 0.51
GOLGA4-201ENST00000356847 APLP2Q06481 763 aa17.99■□□□□ 0.47
GOLGA4-201ENST00000356847 PCGF6Q9BYE7 350 aa17.96■□□□□ 0.47
GOLGA4-201ENST00000356847 FAM9AQ8IZU1 332 aaPredicted RBP17.93■□□□□ 0.46
GOLGA4-201ENST00000356847 TTBK1Q5TCY1 1321 aaPredicted RBP17.93■□□□□ 0.46
GOLGA4-201ENST00000356847 CENPBP07199 599 aaPredicted RBP17.66■□□□□ 0.42
GOLGA4-201ENST00000356847 RANGAP1P46060 587 aaPredicted RBP17.61■□□□□ 0.41
GOLGA4-201ENST00000356847 ZEB1P37275 1124 aaPredicted RBP17.6■□□□□ 0.41
GOLGA4-201ENST00000356847 ERICH6Q7L0X2 663 aa17.6■□□□□ 0.41
GOLGA4-201ENST00000356847 CCER1Q8TC90 406 aaPredicted RBP17.6■□□□□ 0.41
GOLGA4-201ENST00000356847 TRIM41Q8WV44 630 aa17.51■□□□□ 0.39
GOLGA4-201ENST00000356847 YTHDC1Q96MU7 727 aaKnown RBP17.39■□□□□ 0.37
GOLGA4-201ENST00000356847 ATP1B4Q9UN42 357 aaPredicted RBP17.39■□□□□ 0.37
GOLGA4-201ENST00000356847 UBTFP17480 764 aaKnown RBP17.32■□□□□ 0.36
GOLGA4-201ENST00000356847 PPARGC1BQ86YN6 1023 aaKnown RBP17.26■□□□□ 0.35
GOLGA4-201ENST00000356847 NEFLP07196 543 aa17.25■□□□□ 0.35
GOLGA4-201ENST00000356847 MYT1Q01538 1121 aa17.13■□□□□ 0.33
GOLGA4-201ENST00000356847 TRIM26Q12899 539 aaPredicted RBP17.11■□□□□ 0.33
GOLGA4-201ENST00000356847 HRCP23327 699 aa17.04■□□□□ 0.32
GOLGA4-201ENST00000356847 LOC105371045A0A1W2PR82 267 aa16.9■□□□□ 0.3
GOLGA4-201ENST00000356847 ITGAEP38570 1179 aa16.88■□□□□ 0.29
GOLGA4-201ENST00000356847 POLR3GLQ9BT43 218 aa16.81■□□□□ 0.28
GOLGA4-201ENST00000356847 HNRNPUL2Q1KMD3 747 aaKnown RBP16.78■□□□□ 0.28
GOLGA4-201ENST00000356847 DAXXQ9UER7 740 aaPredicted RBP16.76■□□□□ 0.27
GOLGA4-201ENST00000356847 CHIC1Q5VXU3 224 aa16.76■□□□□ 0.27
GOLGA4-201ENST00000356847 CNGB1Q14028 1251 aaPredicted RBP16.7■□□□□ 0.26
GOLGA4-201ENST00000356847 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.66■□□□□ 0.26
GOLGA4-201ENST00000356847 DIEXFQ68CQ4 756 aaKnown RBP16.62■□□□□ 0.25
GOLGA4-201ENST00000356847 MYT1LQ9UL68 1186 aa16.61■□□□□ 0.25
GOLGA4-201ENST00000356847 RTL5Q5HYW3 569 aaPredicted RBP16.43■□□□□ 0.22
GOLGA4-201ENST00000356847 SLC4A1APQ9BWU0 796 aaKnown RBP16.42■□□□□ 0.22
GOLGA4-201ENST00000356847 ZNF316A6NFI3 1004 aaPredicted RBP16.42■□□□□ 0.22
GOLGA4-201ENST00000356847 FAM50AQ14320 339 aaKnown RBP16.41■□□□□ 0.22
GOLGA4-201ENST00000356847 GTF3C3Q9Y5Q9 886 aa16.38■□□□□ 0.21
GOLGA4-201ENST00000356847 BCANQ96GW7 911 aa16.38■□□□□ 0.21
GOLGA4-201ENST00000356847 CLSPNQ9HAW4 1339 aa16.37■□□□□ 0.21
GOLGA4-201ENST00000356847 NEUROD1Q13562 356 aa16.35■□□□□ 0.21
GOLGA4-201ENST00000356847 TRIM52Q96A61 297 aa16.3■□□□□ 0.2
GOLGA4-201ENST00000356847 ANP32CO43423 234 aa16.21■□□□□ 0.19
GOLGA4-201ENST00000356847 CDK11AQ9UQ88 783 aaPredicted RBP16.18■□□□□ 0.18
GOLGA4-201ENST00000356847 ZNF326Q5BKZ1 582 aaKnown RBP16.15■□□□□ 0.18
GOLGA4-201ENST00000356847 PABPN1Q86U42 306 aaKnown RBP eCLIP16.11■□□□□ 0.17
GOLGA4-201ENST00000356847 ACIN1Q9UKV3 1341 aaKnown RBP16.09■□□□□ 0.17
GOLGA4-201ENST00000356847 ABCC9O60706 1549 aa16.06■□□□□ 0.16
GOLGA4-201ENST00000356847 CANXP27824 592 aaKnown RBP15.97■□□□□ 0.15
GOLGA4-201ENST00000356847 BCL11AQ9H165 835 aa15.96■□□□□ 0.15
GOLGA4-201ENST00000356847 ZBTB47Q9UFB7 747 aaPredicted RBP15.96■□□□□ 0.15
GOLGA4-201ENST00000356847 P3H3Q8IVL6 736 aa15.93■□□□□ 0.14
GOLGA4-201ENST00000356847 ANP32AP39687 249 aaKnown RBP15.91■□□□□ 0.14
GOLGA4-201ENST00000356847 NPM2Q86SE8 214 aaKnown RBP15.9■□□□□ 0.14
GOLGA4-201ENST00000356847 ARID3CA6NKF2 412 aa15.89■□□□□ 0.14
GOLGA4-201ENST00000356847 FBLN2P98095 1184 aa15.88■□□□□ 0.13
GOLGA4-201ENST00000356847 FKBP8Q14318 412 aa15.86■□□□□ 0.13
GOLGA4-201ENST00000356847 SLC24A1O60721 1099 aa15.85■□□□□ 0.13
GOLGA4-201ENST00000356847 CSRNP3Q8WYN3 585 aa15.85■□□□□ 0.13
GOLGA4-201ENST00000356847 DCAF1Q9Y4B6 1507 aa15.78■□□□□ 0.12
GOLGA4-201ENST00000356847 ZNF777Q9ULD5 760 aaPredicted RBP15.78■□□□□ 0.12
GOLGA4-201ENST00000356847 NEFMP07197 916 aa15.76■□□□□ 0.11
GOLGA4-201ENST00000356847 SCRIBQ14160 1630 aa15.74■□□□□ 0.11
GOLGA4-201ENST00000356847 TONSLQ96HA7 1378 aa15.73■□□□□ 0.11
GOLGA4-201ENST00000356847 HNRNPUQ00839 825 aaKnown RBP eCLIP15.73■□□□□ 0.11
GOLGA4-201ENST00000356847 DDX10Q13206 875 aaKnown RBP15.72■□□□□ 0.11
GOLGA4-201ENST00000356847 FAM9BQ8IZU0 186 aa15.71■□□□□ 0.1
GOLGA4-201ENST00000356847 EIF5BO60841 1220 aaKnown RBP15.66■□□□□ 0.1
GOLGA4-201ENST00000356847 SALL2Q9Y467 1007 aaPredicted RBP15.64■□□□□ 0.09
GOLGA4-201ENST00000356847 SCAF1Q9H7N4 1312 aaKnown RBP15.63■□□□□ 0.09
GOLGA4-201ENST00000356847 NBR1Q14596 966 aa15.62■□□□□ 0.09
GOLGA4-201ENST00000356847 HSP90AA1P07900 732 aaKnown RBP15.61■□□□□ 0.09
GOLGA4-201ENST00000356847 ANP32BQ92688 251 aaKnown RBP15.6■□□□□ 0.09
GOLGA4-201ENST00000356847 UPF2Q9HAU5 1272 aaKnown RBP15.57■□□□□ 0.08
GOLGA4-201ENST00000356847 CCDC136Q96JN2 1154 aa15.56■□□□□ 0.08
GOLGA4-201ENST00000356847 MIER1Q8N108 512 aa15.56■□□□□ 0.08
GOLGA4-201ENST00000356847 IRX6P78412 446 aaPredicted RBP15.54■□□□□ 0.08
GOLGA4-201ENST00000356847 CHIC2Q9UKJ5 165 aa15.54■□□□□ 0.08
GOLGA4-201ENST00000356847 CHGAP10645 457 aaKnown RBP15.54■□□□□ 0.08
GOLGA4-201ENST00000356847 TMC1Q8TDI8 760 aa15.53■□□□□ 0.08
GOLGA4-201ENST00000356847 ZCCHC6Q5VYS8 1495 aaKnown RBP15.51■□□□□ 0.07
GOLGA4-201ENST00000356847 ARXQ96QS3 562 aa15.5■□□□□ 0.07
GOLGA4-201ENST00000356847 HIRIP3Q9BW71 556 aaPredicted RBP15.5■□□□□ 0.07
GOLGA4-201ENST00000356847 MRS2Q9HD23 443 aa15.48■□□□□ 0.07
GOLGA4-201ENST00000356847 MYO15BQ96JP2 1530 aa15.48■□□□□ 0.07
GOLGA4-201ENST00000356847 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.46■□□□□ 0.061e-7■■■□□ 15.8
GOLGA4-201ENST00000356847 WDR43Q15061 677 aaKnown RBP eCLIP15.45■□□□□ 0.062e-6■□□□□ 9.5
GOLGA4-201ENST00000356847 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.45■□□□□ 0.06
GOLGA4-201ENST00000356847 STAG3Q9UJ98 1225 aa15.44■□□□□ 0.06
GOLGA4-201ENST00000356847 KDM2AQ9Y2K7 1162 aa15.44■□□□□ 0.06
GOLGA4-201ENST00000356847 ESF1Q9H501 851 aaKnown RBP15.39■□□□□ 0.05
GOLGA4-201ENST00000356847 GLIPR1L2Q4G1C9 344 aa15.38■□□□□ 0.05
GOLGA4-201ENST00000356847 CLIP1P30622 1438 aa15.38■□□□□ 0.05
GOLGA4-201ENST00000356847 PLPPR3Q6T4P5 718 aa15.37■□□□□ 0.05
GOLGA4-201ENST00000356847 CCDC180Q9P1Z9 1646 aa15.37■□□□□ 0.05
GOLGA4-201ENST00000356847 MTUS2Q5JR59 1369 aa15.36■□□□□ 0.05
GOLGA4-201ENST00000356847 EIF4G2P78344 907 aaKnown RBP eCLIP15.32■□□□□ 0.043e-9■■■■□ 23.1
GOLGA4-201ENST00000356847 RRP7BPQ9NSQ0 103 aa15.31■□□□□ 0.04
GOLGA4-201ENST00000356847 CEP162Q5TB80 1403 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms