RNA–Protein interactions for RNA: ENST00000358951.6

RAB3GAP2-202, Transcript of RAB3 GTPase activating non-catalytic protein subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3GAP2, Length 7,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP2-202ENST00000358951 DCAF8L2P0C7V8 631 aa18.44■□□□□ 0.54
RAB3GAP2-202ENST00000358951 SUPT5HO00267 1087 aaKnown RBP18.21■□□□□ 0.51
RAB3GAP2-202ENST00000358951 NISCHQ9Y2I1 1504 aa17.92■□□□□ 0.46
RAB3GAP2-202ENST00000358951 SHROOM4Q9ULL8 1493 aa17.92■□□□□ 0.46
RAB3GAP2-202ENST00000358951 EHMT2Q96KQ7 1210 aa17.77■□□□□ 0.44
RAB3GAP2-202ENST00000358951 PCGF6Q9BYE7 350 aa17.66■□□□□ 0.42
RAB3GAP2-202ENST00000358951 PELP1Q8IZL8 1130 aaKnown RBP17.52■□□□□ 0.39
RAB3GAP2-202ENST00000358951 TTBK1Q5TCY1 1321 aaPredicted RBP17.25■□□□□ 0.35
RAB3GAP2-202ENST00000358951 CENPBP07199 599 aaPredicted RBP17.19■□□□□ 0.34
RAB3GAP2-202ENST00000358951 FAM9AQ8IZU1 332 aaPredicted RBP17.19■□□□□ 0.34
RAB3GAP2-202ENST00000358951 ZEB1P37275 1124 aaPredicted RBP17.1■□□□□ 0.33
RAB3GAP2-202ENST00000358951 MYT1Q01538 1121 aa17.09■□□□□ 0.33
RAB3GAP2-202ENST00000358951 YTHDC1Q96MU7 727 aaKnown RBP17.02■□□□□ 0.32
RAB3GAP2-202ENST00000358951 CCER1Q8TC90 406 aaPredicted RBP17.02■□□□□ 0.31
RAB3GAP2-202ENST00000358951 HRCP23327 699 aa17.01■□□□□ 0.31
RAB3GAP2-202ENST00000358951 ERICH6Q7L0X2 663 aa17.01■□□□□ 0.31
RAB3GAP2-202ENST00000358951 APLP2Q06481 763 aa16.92■□□□□ 0.3
RAB3GAP2-202ENST00000358951 PPARGC1BQ86YN6 1023 aaKnown RBP16.89■□□□□ 0.29
RAB3GAP2-202ENST00000358951 TRIM26Q12899 539 aaPredicted RBP16.72■□□□□ 0.27
RAB3GAP2-202ENST00000358951 TRIM41Q8WV44 630 aa16.72■□□□□ 0.27
RAB3GAP2-202ENST00000358951 RANGAP1P46060 587 aaPredicted RBP16.7■□□□□ 0.26
RAB3GAP2-202ENST00000358951 NEFLP07196 543 aa16.58■□□□□ 0.24
RAB3GAP2-202ENST00000358951 LOC105371045A0A1W2PR82 267 aa16.56■□□□□ 0.24
RAB3GAP2-202ENST00000358951 UBTFP17480 764 aaKnown RBP16.43■□□□□ 0.22
RAB3GAP2-202ENST00000358951 CHIC1Q5VXU3 224 aa16.38■□□□□ 0.21
RAB3GAP2-202ENST00000358951 ATP1B4Q9UN42 357 aaPredicted RBP16.34■□□□□ 0.21
RAB3GAP2-202ENST00000358951 DIEXFQ68CQ4 756 aaKnown RBP16.32■□□□□ 0.2
RAB3GAP2-202ENST00000358951 GTF3C3Q9Y5Q9 886 aa16.32■□□□□ 0.2
RAB3GAP2-202ENST00000358951 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.3■□□□□ 0.2
RAB3GAP2-202ENST00000358951 HNRNPUL2Q1KMD3 747 aaKnown RBP16.17■□□□□ 0.18
RAB3GAP2-202ENST00000358951 ITGAEP38570 1179 aa16.11■□□□□ 0.17
RAB3GAP2-202ENST00000358951 BCANQ96GW7 911 aa16.09■□□□□ 0.17
RAB3GAP2-202ENST00000358951 ACIN1Q9UKV3 1341 aaKnown RBP16.05■□□□□ 0.16
RAB3GAP2-202ENST00000358951 DAXXQ9UER7 740 aaPredicted RBP16.02■□□□□ 0.15
RAB3GAP2-202ENST00000358951 CNGB1Q14028 1251 aaPredicted RBP15.99■□□□□ 0.15
RAB3GAP2-202ENST00000358951 POLR3GLQ9BT43 218 aa15.96■□□□□ 0.15
RAB3GAP2-202ENST00000358951 RTL5Q5HYW3 569 aaPredicted RBP15.93■□□□□ 0.14
RAB3GAP2-202ENST00000358951 SCAF1Q9H7N4 1312 aaKnown RBP15.89■□□□□ 0.14
RAB3GAP2-202ENST00000358951 ZNF316A6NFI3 1004 aaPredicted RBP15.83■□□□□ 0.12
RAB3GAP2-202ENST00000358951 NEUROD1Q13562 356 aa15.76■□□□□ 0.11
RAB3GAP2-202ENST00000358951 CDK11AQ9UQ88 783 aaPredicted RBP15.74■□□□□ 0.11
RAB3GAP2-202ENST00000358951 ANP32CO43423 234 aa15.61■□□□□ 0.09
RAB3GAP2-202ENST00000358951 FAM50AQ14320 339 aaKnown RBP15.6■□□□□ 0.09
RAB3GAP2-202ENST00000358951 CLSPNQ9HAW4 1339 aa15.6■□□□□ 0.09
RAB3GAP2-202ENST00000358951 DCAF1Q9Y4B6 1507 aa15.59■□□□□ 0.09
RAB3GAP2-202ENST00000358951 FKBP8Q14318 412 aa15.57■□□□□ 0.08
RAB3GAP2-202ENST00000358951 MYO15BQ96JP2 1530 aa15.5■□□□□ 0.07
RAB3GAP2-202ENST00000358951 NPM2Q86SE8 214 aaKnown RBP15.47■□□□□ 0.07
RAB3GAP2-202ENST00000358951 EIF5BO60841 1220 aaKnown RBP15.46■□□□□ 0.06
RAB3GAP2-202ENST00000358951 ANP32AP39687 249 aaKnown RBP15.44■□□□□ 0.06
RAB3GAP2-202ENST00000358951 TRIM52Q96A61 297 aa15.43■□□□□ 0.06
RAB3GAP2-202ENST00000358951 NBR1Q14596 966 aa15.42■□□□□ 0.06
RAB3GAP2-202ENST00000358951 MIER1Q8N108 512 aa15.41■□□□□ 0.06
RAB3GAP2-202ENST00000358951 SLC4A1APQ9BWU0 796 aaKnown RBP15.39■□□□□ 0.05
RAB3GAP2-202ENST00000358951 ZNF326Q5BKZ1 582 aaKnown RBP15.33■□□□□ 0.04
RAB3GAP2-202ENST00000358951 MYT1LQ9UL68 1186 aa15.32■□□□□ 0.04
RAB3GAP2-202ENST00000358951 ANP32EQ9BTT0 268 aa15.29■□□□□ 0.04
RAB3GAP2-202ENST00000358951 CCDC180Q9P1Z9 1646 aa15.28■□□□□ 0.04
RAB3GAP2-202ENST00000358951 DDX10Q13206 875 aaKnown RBP15.28■□□□□ 0.04
RAB3GAP2-202ENST00000358951 IRX6P78412 446 aaPredicted RBP15.27■□□□□ 0.03
RAB3GAP2-202ENST00000358951 HNRNPUQ00839 825 aaKnown RBP eCLIP15.25■□□□□ 0.03
RAB3GAP2-202ENST00000358951 BCL11AQ9H165 835 aa15.19■□□□□ 0.02
RAB3GAP2-202ENST00000358951 FAM9BQ8IZU0 186 aa15.19■□□□□ 0.02
RAB3GAP2-202ENST00000358951 ZBTB47Q9UFB7 747 aaPredicted RBP15.17■□□□□ 0.02
RAB3GAP2-202ENST00000358951 CANXP27824 592 aaKnown RBP15.16■□□□□ 0.02
RAB3GAP2-202ENST00000358951 CSRNP3Q8WYN3 585 aa15.14■□□□□ 0.01
RAB3GAP2-202ENST00000358951 P3H3Q8IVL6 736 aa15.12■□□□□ 0.01
RAB3GAP2-202ENST00000358951 ARXQ96QS3 562 aa15.11■□□□□ 0.01
RAB3GAP2-202ENST00000358951 HIRIP3Q9BW71 556 aaPredicted RBP15.11■□□□□ 0.01
RAB3GAP2-202ENST00000358951 CCDC136Q96JN2 1154 aa15.08■□□□□ 0.01
RAB3GAP2-202ENST00000358951 SALL2Q9Y467 1007 aaPredicted RBP15.08■□□□□ 0
RAB3GAP2-202ENST00000358951 GLIPR1L2Q4G1C9 344 aa15.07■□□□□ 0
RAB3GAP2-202ENST00000358951 SUPT16HQ9Y5B9 1047 aaKnown RBP15.06■□□□□ 0
RAB3GAP2-202ENST00000358951 TONSLQ96HA7 1378 aa15.04■□□□□ -0
RAB3GAP2-202ENST00000358951 PABPN1Q86U42 306 aaKnown RBP eCLIP15.03■□□□□ -0
RAB3GAP2-202ENST00000358951 RTN4Q9NQC3 1192 aaKnown RBP15.03■□□□□ -0
RAB3GAP2-202ENST00000358951 ARID3CA6NKF2 412 aa15□□□□□ -0.01
RAB3GAP2-202ENST00000358951 SCRIBQ14160 1630 aa14.97□□□□□ -0.01
RAB3GAP2-202ENST00000358951 ANP32BQ92688 251 aaKnown RBP14.94□□□□□ -0.02
RAB3GAP2-202ENST00000358951 ABCC9O60706 1549 aa14.94□□□□□ -0.02
RAB3GAP2-202ENST00000358951 MRS2Q9HD23 443 aa14.93□□□□□ -0.02
RAB3GAP2-202ENST00000358951 ZCCHC6Q5VYS8 1495 aaKnown RBP14.93□□□□□ -0.02
RAB3GAP2-202ENST00000358951 SENP3-EIF4A1A0A087X0R7 540 aa14.91□□□□□ -0.02
RAB3GAP2-202ENST00000358951 HSP90AA1P07900 732 aaKnown RBP14.9□□□□□ -0.02
RAB3GAP2-202ENST00000358951 UPF2Q9HAU5 1272 aaKnown RBP14.87□□□□□ -0.03
RAB3GAP2-202ENST00000358951 TMC1Q8TDI8 760 aa14.87□□□□□ -0.03
RAB3GAP2-202ENST00000358951 LAS1LQ9Y4W2 734 aaKnown RBP14.86□□□□□ -0.03
RAB3GAP2-202ENST00000358951 DEKP35659 375 aaKnown RBP14.85□□□□□ -0.03
RAB3GAP2-202ENST00000358951 NOP58Q9Y2X3 529 aaKnown RBP14.84□□□□□ -0.03
RAB3GAP2-202ENST00000358951 RBM19Q9Y4C8 960 aaKnown RBP14.83□□□□□ -0.04
RAB3GAP2-202ENST00000358951 ZNF777Q9ULD5 760 aaPredicted RBP14.82□□□□□ -0.04
RAB3GAP2-202ENST00000358951 CEP162Q5TB80 1403 aa14.82□□□□□ -0.04
RAB3GAP2-202ENST00000358951 SLC24A1O60721 1099 aa14.81□□□□□ -0.04
RAB3GAP2-202ENST00000358951 CHIC2Q9UKJ5 165 aa14.81□□□□□ -0.04
RAB3GAP2-202ENST00000358951 NEFMP07197 916 aa14.8□□□□□ -0.04
RAB3GAP2-202ENST00000358951 DDRGK1Q96HY6 314 aa14.8□□□□□ -0.04
RAB3GAP2-202ENST00000358951 TSHZ2Q9NRE2 1034 aa14.77□□□□□ -0.05
RAB3GAP2-202ENST00000358951 CLIP1P30622 1438 aa14.76□□□□□ -0.05
RAB3GAP2-202ENST00000358951 B4GALNT3Q6L9W6 998 aa14.75□□□□□ -0.05
RAB3GAP2-202ENST00000358951 PPP4R2Q9NY27 417 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms