RNA–Protein interactions for RNA: ENST00000474178.1

RAB3GAP2-204, Transcript of RAB3 GTPase activating non-catalytic protein subunit 2, humanhuman

TSL 4

Gene RAB3GAP2, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP2-204ENST00000474178 NISCHQ9Y2I1 1504 aa25.9■■□□□ 1.74
RAB3GAP2-204ENST00000474178 ABCC9O60706 1549 aa23.97■■□□□ 1.43
RAB3GAP2-204ENST00000474178 CCDC180Q9P1Z9 1646 aa23.48■■□□□ 1.35
RAB3GAP2-204ENST00000474178 DNAJC5BQ9UF47 199 aa22.98■■□□□ 1.27
RAB3GAP2-204ENST00000474178 RB1CC1Q8TDY2 1594 aa22.55■■□□□ 1.2
RAB3GAP2-204ENST00000474178 NACADO15069 1562 aa22.27■■□□□ 1.16
RAB3GAP2-204ENST00000474178 UNC13AQ9UPW8 1703 aa22.23■■□□□ 1.15
RAB3GAP2-204ENST00000474178 PABPN1Q86U42 306 aaKnown RBP eCLIP22.21■■□□□ 1.15
RAB3GAP2-204ENST00000474178 BICRAQ9NZM4 1560 aa22.03■■□□□ 1.12
RAB3GAP2-204ENST00000474178 DCAF8L2P0C7V8 631 aa21.98■■□□□ 1.11
RAB3GAP2-204ENST00000474178 MYO15BQ96JP2 1530 aa21.78■■□□□ 1.08
RAB3GAP2-204ENST00000474178 CC2D2AQ9P2K1 1620 aa21.66■■□□□ 1.06
RAB3GAP2-204ENST00000474178 CECR2Q9BXF3 1484 aa21.61■■□□□ 1.05
RAB3GAP2-204ENST00000474178 SHROOM4Q9ULL8 1493 aa21.52■■□□□ 1.03
RAB3GAP2-204ENST00000474178 EIF4G1Q04637 1599 aaKnown RBP21.47■■□□□ 1.03
RAB3GAP2-204ENST00000474178 SCRIBQ14160 1630 aa21.39■■□□□ 1.01
RAB3GAP2-204ENST00000474178 DNAJC5Q9H3Z4 198 aa21.38■■□□□ 1.01
RAB3GAP2-204ENST00000474178 ZCCHC6Q5VYS8 1495 aaKnown RBP21.37■■□□□ 1.01
RAB3GAP2-204ENST00000474178 DCAF1Q9Y4B6 1507 aa21.34■■□□□ 1.01
RAB3GAP2-204ENST00000474178 CHIC1Q5VXU3 224 aa20.88■□□□□ 0.93
RAB3GAP2-204ENST00000474178 CUX2O14529 1486 aa20.81■□□□□ 0.92
RAB3GAP2-204ENST00000474178 AEBP2Q6ZN18 517 aaPredicted RBP20.78■□□□□ 0.92
RAB3GAP2-204ENST00000474178 ERCC6Q03468 1493 aa20.65■□□□□ 0.9
RAB3GAP2-204ENST00000474178 NCAPD3P42695 1498 aa20.56■□□□□ 0.88
RAB3GAP2-204ENST00000474178 NESP48681 1621 aa20.49■□□□□ 0.87
RAB3GAP2-204ENST00000474178 ATAD2BQ9ULI0 1458 aa20.46■□□□□ 0.87
RAB3GAP2-204ENST00000474178 THOC2Q8NI27 1593 aaKnown RBP20.4■□□□□ 0.86
RAB3GAP2-204ENST00000474178 HMGXB3Q12766 1538 aa20.38■□□□□ 0.85
RAB3GAP2-204ENST00000474178 SMARCA4P51532 1647 aa20.35■□□□□ 0.85
RAB3GAP2-204ENST00000474178 SMARCA2P51531 1590 aa20.33■□□□□ 0.84
RAB3GAP2-204ENST00000474178 KIF21AQ7Z4S6 1674 aa20.24■□□□□ 0.83
RAB3GAP2-204ENST00000474178 TRIM41Q8WV44 630 aa20.22■□□□□ 0.83
RAB3GAP2-204ENST00000474178 BAZ1BQ9UIG0 1483 aaKnown RBP20.2■□□□□ 0.82
RAB3GAP2-204ENST00000474178 LAMC3Q9Y6N6 1575 aa20.2■□□□□ 0.82
RAB3GAP2-204ENST00000474178 PEG3Q9GZU2 1588 aa20.14■□□□□ 0.81
RAB3GAP2-204ENST00000474178 BAZ1AQ9NRL2 1556 aaPredicted RBP20.11■□□□□ 0.81
RAB3GAP2-204ENST00000474178 PDS5BQ9NTI5 1447 aa20.02■□□□□ 0.8
RAB3GAP2-204ENST00000474178 MROH2BQ7Z745 1585 aa20■□□□□ 0.79
RAB3GAP2-204ENST00000474178 WDR62O43379 1518 aa19.96■□□□□ 0.79
RAB3GAP2-204ENST00000474178 MRC2Q9UBG0 1479 aa19.94■□□□□ 0.78
RAB3GAP2-204ENST00000474178 CADPSQ9ULU8 1353 aa19.9■□□□□ 0.78
RAB3GAP2-204ENST00000474178 WIZO95785 1651 aa19.77■□□□□ 0.76
RAB3GAP2-204ENST00000474178 CEP164Q9UPV0 1460 aa19.75■□□□□ 0.75
RAB3GAP2-204ENST00000474178 OSCARQ8IYS5 282 aa19.72■□□□□ 0.75
RAB3GAP2-204ENST00000474178 FANCD2Q9BXW9 1451 aa19.7■□□□□ 0.74
RAB3GAP2-204ENST00000474178 RIMBP3CA6NJZ7 1639 aa19.66■□□□□ 0.74
RAB3GAP2-204ENST00000474178 RIMBP3BA6NNM3 1639 aa19.66■□□□□ 0.74
RAB3GAP2-204ENST00000474178 RIMBP3Q9UFD9 1639 aa19.66■□□□□ 0.74
RAB3GAP2-204ENST00000474178 URB2Q14146 1524 aaKnown RBP19.62■□□□□ 0.73
RAB3GAP2-204ENST00000474178 CFTRP13569 1480 aa19.6■□□□□ 0.73
RAB3GAP2-204ENST00000474178 ARHGEF11O15085 1522 aa19.51■□□□□ 0.71
RAB3GAP2-204ENST00000474178 ZNF608Q9ULD9 1512 aaPredicted RBP19.47■□□□□ 0.71
RAB3GAP2-204ENST00000474178 PRDM2Q13029 1718 aa19.45■□□□□ 0.7
RAB3GAP2-204ENST00000474178 TOP2AP11388 1531 aaKnown RBP19.41■□□□□ 0.7
RAB3GAP2-204ENST00000474178 IFT140Q96RY7 1462 aa19.36■□□□□ 0.69
RAB3GAP2-204ENST00000474178 RSF1Q96T23 1441 aaPredicted RBP19.34■□□□□ 0.69
RAB3GAP2-204ENST00000474178 EIF4G3O43432 1585 aaKnown RBP19.34■□□□□ 0.69
RAB3GAP2-204ENST00000474178 CHD1O14646 1710 aa19.34■□□□□ 0.69
RAB3GAP2-204ENST00000474178 CYB5RLQ6IPT4 315 aa19.33■□□□□ 0.68
RAB3GAP2-204ENST00000474178 ARAP1Q96P48 1450 aa19.31■□□□□ 0.68
RAB3GAP2-204ENST00000474178 TOPBP1Q92547 1522 aa19.3■□□□□ 0.68
RAB3GAP2-204ENST00000474178 TRHP20396 242 aaPredicted RBP19.23■□□□□ 0.67
RAB3GAP2-204ENST00000474178 TARBP1Q13395 1621 aaKnown RBP19.21■□□□□ 0.67
RAB3GAP2-204ENST00000474178 CCDC88BA6NC98 1476 aa19.2■□□□□ 0.66
RAB3GAP2-204ENST00000474178 AQRO60306 1485 aaKnown RBP eCLIP19.19■□□□□ 0.66
RAB3GAP2-204ENST00000474178 DNMBPQ6XZF7 1577 aa19.18■□□□□ 0.66
RAB3GAP2-204ENST00000474178 ABCC8Q09428 1581 aa19.12■□□□□ 0.65
RAB3GAP2-204ENST00000474178 FBLN2P98095 1184 aa19.07■□□□□ 0.64
RAB3GAP2-204ENST00000474178 POLA1P09884 1462 aaPredicted RBP19.07■□□□□ 0.64
RAB3GAP2-204ENST00000474178 CLASP1Q7Z460 1538 aa19.05■□□□□ 0.64
RAB3GAP2-204ENST00000474178 RAD54L2Q9Y4B4 1467 aa19.03■□□□□ 0.64
RAB3GAP2-204ENST00000474178 SNAPC4Q5SXM2 1469 aa18.98■□□□□ 0.63
RAB3GAP2-204ENST00000474178 TDRD9Q8NDG6 1382 aaKnown RBP18.97■□□□□ 0.63
RAB3GAP2-204ENST00000474178 SYNJ1O43426 1573 aa18.93■□□□□ 0.62
RAB3GAP2-204ENST00000474178 SOGA1O94964 1423 aa18.92■□□□□ 0.62
RAB3GAP2-204ENST00000474178 WDR97A6NE52 1622 aa18.89■□□□□ 0.61
RAB3GAP2-204ENST00000474178 FGD5Q6ZNL6 1462 aa18.87■□□□□ 0.61
RAB3GAP2-204ENST00000474178 MAGI1Q96QZ7 1491 aaPredicted RBP18.86■□□□□ 0.61
RAB3GAP2-204ENST00000474178 CHMP7Q8WUX9 453 aaPredicted RBP18.84■□□□□ 0.61
RAB3GAP2-204ENST00000474178 GAPVD1Q14C86 1478 aa18.83■□□□□ 0.6
RAB3GAP2-204ENST00000474178 PBRM1Q86U86 1689 aa18.82■□□□□ 0.6
RAB3GAP2-204ENST00000474178 SYNJ2O15056 1496 aa18.82■□□□□ 0.6
RAB3GAP2-204ENST00000474178 CUX1P39880 1505 aa18.81■□□□□ 0.6
RAB3GAP2-204ENST00000474178 GRIN2BQ13224 1484 aa18.81■□□□□ 0.6
RAB3GAP2-204ENST00000474178 ERCC6L2Q5T890 1561 aa18.78■□□□□ 0.6
RAB3GAP2-204ENST00000474178 ABCA5Q8WWZ7 1642 aa18.69■□□□□ 0.58
RAB3GAP2-204ENST00000474178 KIF13AQ9H1H9 1805 aa18.68■□□□□ 0.58
RAB3GAP2-204ENST00000474178 CEP170Q5SW79 1584 aa18.64■□□□□ 0.57
RAB3GAP2-204ENST00000474178 ABCA10Q8WWZ4 1543 aa18.61■□□□□ 0.57
RAB3GAP2-204ENST00000474178 SHROOM2Q13796 1616 aa18.6■□□□□ 0.57
RAB3GAP2-204ENST00000474178 GRIN2AQ12879 1464 aa18.59■□□□□ 0.57
RAB3GAP2-204ENST00000474178 ADAMTS12P58397 1594 aa18.57■□□□□ 0.56
RAB3GAP2-204ENST00000474178 NUP160Q12769 1436 aa18.57■□□□□ 0.56
RAB3GAP2-204ENST00000474178 PHF23Q9BUL5 403 aaPredicted RBP18.43■□□□□ 0.54
RAB3GAP2-204ENST00000474178 FHAD1B1AJZ9 1412 aa18.41■□□□□ 0.54
RAB3GAP2-204ENST00000474178 ABCC10Q5T3U5 1492 aa18.4■□□□□ 0.54
RAB3GAP2-204ENST00000474178 PRG4Q92954 1404 aaPredicted RBP18.4■□□□□ 0.54
RAB3GAP2-204ENST00000474178 DIP2BQ9P265 1576 aa18.39■□□□□ 0.53
RAB3GAP2-204ENST00000474178 KDM4FA0A1W2PPD8 638 aa18.39■□□□□ 0.53
RAB3GAP2-204ENST00000474178 BIVM-ERCC5R4GMW8 1640 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms