Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC22.09■■□□□ 1.13
TUBA1AQ71U36 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TUBA1AQ71U36 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TUBA1AQ71U36 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TUBA1AQ71U36 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TUBA1AQ71U36 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.12
TUBA1AQ71U36 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
TUBA1AQ71U36 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
TUBA1AQ71U36 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TUBA1AQ71U36 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
TUBA1AQ71U36 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC22.07■■□□□ 1.12
TUBA1AQ71U36 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TUBA1AQ71U36 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC22.07■■□□□ 1.12
TUBA1AQ71U36 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
TUBA1AQ71U36 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TUBA1AQ71U36 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TUBA1AQ71U36 RPS2-210ENST00000530225 765 ntTSL 2 BASIC22.06■■□□□ 1.12
TUBA1AQ71U36 MIR4449-201ENST00000578365 66 ntBASIC22.06■■□□□ 1.12
TUBA1AQ71U36 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TUBA1AQ71U36 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TUBA1AQ71U36 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TUBA1AQ71U36 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
TUBA1AQ71U36 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
TUBA1AQ71U36 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
TUBA1AQ71U36 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TUBA1AQ71U36 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC22.05■■□□□ 1.12
TUBA1AQ71U36 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
TUBA1AQ71U36 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
TUBA1AQ71U36 AC133561.1-201ENST00000568600 2415 ntBASIC22.05■■□□□ 1.12
TUBA1AQ71U36 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.05■■□□□ 1.12
TUBA1AQ71U36 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC22.05■■□□□ 1.12
TUBA1AQ71U36 AC008813.1-201ENST00000536597 885 ntBASIC22.05■■□□□ 1.12
TUBA1AQ71U36 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
TUBA1AQ71U36 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TUBA1AQ71U36 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC22.04■■□□□ 1.12
TUBA1AQ71U36 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC22.04■■□□□ 1.12
TUBA1AQ71U36 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
TUBA1AQ71U36 AC142381.3-201ENST00000568208 1670 ntBASIC22.04■■□□□ 1.12
TUBA1AQ71U36 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
TUBA1AQ71U36 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC22.03■■□□□ 1.12
TUBA1AQ71U36 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
TUBA1AQ71U36 TMEM202-AS1-202ENST00000565181 2325 ntBASIC22.03■■□□□ 1.12
TUBA1AQ71U36 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.03■■□□□ 1.12
TUBA1AQ71U36 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
TUBA1AQ71U36 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TUBA1AQ71U36 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22.03■■□□□ 1.12
TUBA1AQ71U36 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TUBA1AQ71U36 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TUBA1AQ71U36 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22.02■■□□□ 1.12
TUBA1AQ71U36 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC22.02■■□□□ 1.12
TUBA1AQ71U36 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TUBA1AQ71U36 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
TUBA1AQ71U36 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TUBA1AQ71U36 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
TUBA1AQ71U36 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
TUBA1AQ71U36 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TUBA1AQ71U36 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TUBA1AQ71U36 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
TUBA1AQ71U36 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TUBA1AQ71U36 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC22.01■■□□□ 1.11
TUBA1AQ71U36 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
TUBA1AQ71U36 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
TUBA1AQ71U36 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
TUBA1AQ71U36 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
TUBA1AQ71U36 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TUBA1AQ71U36 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TUBA1AQ71U36 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22■■□□□ 1.11
TUBA1AQ71U36 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
TUBA1AQ71U36 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TUBA1AQ71U36 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
TUBA1AQ71U36 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TUBA1AQ71U36 CHST11-203ENST00000547956 936 ntTSL 2 BASIC22■■□□□ 1.11
TUBA1AQ71U36 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC22■■□□□ 1.11
TUBA1AQ71U36 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
TUBA1AQ71U36 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
TUBA1AQ71U36 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
TUBA1AQ71U36 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
TUBA1AQ71U36 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TUBA1AQ71U36 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TUBA1AQ71U36 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TUBA1AQ71U36 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.99■■□□□ 1.11
TUBA1AQ71U36 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
TUBA1AQ71U36 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
TUBA1AQ71U36 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
TUBA1AQ71U36 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TUBA1AQ71U36 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.98■■□□□ 1.11
TUBA1AQ71U36 MIR219A2-201ENST00000608502 1504 ntBASIC21.98■■□□□ 1.11
TUBA1AQ71U36 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
TUBA1AQ71U36 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
TUBA1AQ71U36 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TUBA1AQ71U36 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TUBA1AQ71U36 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
TUBA1AQ71U36 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TUBA1AQ71U36 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TUBA1AQ71U36 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TUBA1AQ71U36 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.97■■□□□ 1.11
TUBA1AQ71U36 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TUBA1AQ71U36 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TUBA1AQ71U36 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
TUBA1AQ71U36 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms